5ca3dad | William Yue | 18 July 2021, 02:28:48 UTC | changed pass by value to reference | 18 July 2021, 02:28:48 UTC |
0d04388 | William Yue | 17 July 2021, 22:06:18 UTC | allows for filenames with multiple periods | 17 July 2021, 22:06:18 UTC |
026a0a7 | William Yue | 16 July 2021, 23:38:51 UTC | merged .blocks and .IDs files | 16 July 2021, 23:38:51 UTC |
37584cc | ardalan-n | 16 July 2021, 15:59:55 UTC | Add files via upload | 16 July 2021, 15:59:55 UTC |
317e72e | William Yue | 15 July 2021, 21:32:03 UTC | Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT | 15 July 2021, 21:32:03 UTC |
43c3135 | William Yue | 15 July 2021, 21:31:49 UTC | allows for filenames with mulitple periods | 15 July 2021, 21:31:49 UTC |
2febeaf | William Yue | 05 July 2021, 23:03:45 UTC | simplified gap code | 05 July 2021, 23:03:45 UTC |
922d491 | William Yue | 05 July 2021, 22:39:28 UTC | simplified algo 1 block assignment code | 05 July 2021, 22:39:28 UTC |
191ff7c | William Yue | 05 July 2021, 07:06:13 UTC | added comment on special gap size of zero case | 05 July 2021, 07:06:13 UTC |
003159a | William Yue | 05 July 2021, 06:31:47 UTC | Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT | 05 July 2021, 06:31:47 UTC |
deee827 | William Yue | 05 July 2021, 06:30:53 UTC | enclosed input with VCFReader struct | 05 July 2021, 06:30:53 UTC |
6034a58 | William Yue | 01 July 2021, 23:47:53 UTC | fixed markdown angle bracket issue | 01 July 2021, 23:47:53 UTC |
23dd48e | William Yue | 01 July 2021, 23:42:10 UTC | improved readability of README | 01 July 2021, 23:42:10 UTC |
2a1da83 | William Yue | 01 July 2021, 23:29:40 UTC | fixed spelling mistake | 01 July 2021, 23:29:40 UTC |
fafe741 | William Yue | 01 July 2021, 23:23:43 UTC | added Forward-Only PBWT documentation | 01 July 2021, 23:23:43 UTC |
12df0ce | William Yue | 01 July 2021, 22:34:55 UTC | Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT | 01 July 2021, 22:34:55 UTC |
871be1c | William Yue | 01 July 2021, 22:34:11 UTC | changed haplotype ID suffix format | 01 July 2021, 22:34:11 UTC |
1ea5e62 | ardalan-n | 01 July 2021, 19:21:57 UTC | Update README.md | 01 July 2021, 19:21:57 UTC |
981b021 | William Yue | 01 July 2021, 19:08:54 UTC | added Makefile for forward-only PBWT | 01 July 2021, 19:08:54 UTC |
2075ce2 | William Yue | 01 July 2021, 19:04:32 UTC | added Forward-Only PBWT | 01 July 2021, 19:04:32 UTC |
c86f56e | William Yue | 10 June 2021, 20:42:04 UTC | removed debug code | 10 June 2021, 20:42:04 UTC |
0689b23 | William Yue | 03 June 2021, 22:32:44 UTC | Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT | 03 June 2021, 22:32:44 UTC |
9386e0e | William Yue | 03 June 2021, 22:31:50 UTC | fixed 1-off block length cutoff bug | 03 June 2021, 22:31:50 UTC |
0a138e1 | William Yue | 29 May 2021, 21:16:36 UTC | changed file naming | 29 May 2021, 21:16:36 UTC |
8930fd4 | William Yue | 26 May 2021, 01:59:55 UTC | changed algorithm 2 implementation to radix sort | 26 May 2021, 01:59:55 UTC |
618f061 | William Yue | 25 May 2021, 21:43:58 UTC | simplified genomic pointers | 25 May 2021, 21:43:58 UTC |
f568aea | William Yue | 25 May 2021, 20:32:13 UTC | fixed sparse table bug: changed min to max | 25 May 2021, 20:32:13 UTC |
60dec6c | William Yue | 25 May 2021, 04:45:25 UTC | added haplotype indentifiers for each individual ID | 25 May 2021, 04:45:25 UTC |
3ad0633 | William Yue | 25 May 2021, 04:29:27 UTC | Used block trick to create linear sparse table construction | 25 May 2021, 04:29:27 UTC |
4c60bf6 | William Yue | 30 March 2021, 00:33:43 UTC | increased size of example vcf file | 30 March 2021, 00:33:43 UTC |
a3b88e9 | William Yue | 21 February 2021, 00:44:46 UTC | added GNU getopt as a dependency | 21 February 2021, 00:44:46 UTC |
7fec322 | William Yue | 18 February 2021, 07:29:39 UTC | Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT | 18 February 2021, 07:29:39 UTC |
e9de0ba | William Yue | 18 February 2021, 07:27:39 UTC | updated README | 18 February 2021, 07:27:39 UTC |
b9e2ed5 | William Yue | 15 February 2021, 05:54:21 UTC | updated help page | 15 February 2021, 05:54:21 UTC |
22e96ed | Yue | 10 February 2021, 01:07:29 UTC | added support for both site and base pair distance | 10 February 2021, 01:07:29 UTC |
a2a019e | Yue | 10 February 2021, 01:03:40 UTC | Example VCF file | 10 February 2021, 01:03:40 UTC |
4313256 | William Yue | 09 February 2021, 07:15:24 UTC | Merge branch 'master' of https://github.com/ZhiGroup/bi-PBWT | 09 February 2021, 07:15:24 UTC |
cbf10f2 | William Yue | 09 February 2021, 07:15:11 UTC | added gap and mismatch cluster functionality | 09 February 2021, 07:15:11 UTC |
f39c10f | ardalan-n | 05 February 2021, 18:20:36 UTC | Update README.md | 05 February 2021, 18:20:36 UTC |
cf8803e | ardalan-n | 05 February 2021, 15:29:15 UTC | Update README.md | 05 February 2021, 15:29:15 UTC |
387f712 | William Yue | 05 February 2021, 01:36:37 UTC | modified README | 05 February 2021, 01:36:37 UTC |
aeac50c | William Yue | 05 February 2021, 01:16:05 UTC | added help page | 05 February 2021, 01:16:05 UTC |
5f68303 | William Yue | 05 February 2021, 00:23:29 UTC | added gap support | 05 February 2021, 00:23:29 UTC |
a81b812 | William Yue | 04 February 2021, 05:18:58 UTC | code cleanup | 04 February 2021, 05:18:58 UTC |
8209640 | William | 28 January 2021, 03:38:45 UTC | init | 28 January 2021, 03:38:45 UTC |