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0d4c974 Faster incremental sysimg rebuilds This commit provides the ability to rebuild system images much faster. The key observation is that most of the time in sysimage build is spent in LLVM generating native code (serializing julia's data structures is quite fast). Thus if we can re-use the code already generated for the system image we're currently running, we'll save a fair amount of time. Unfortunately, this is not 100% straightforward since we were assuming that no linking happens in a number of places. This PR hacks around that, but it is not a particularly satisfying long term solution. That said, it should work fine, and I think it's worth doing, so that we can explore the workflow adjustments that would rely on this. With that said, here's how to use this (at the low level, of course PkgCompiler would just handle this) ```shell $ mkdir chained $ time ./usr/bin/julia --sysimage-native-code=chained --sysimage=usr/lib/julia/sys.so --output-o chained/chained.o.a -e 'Base.__init_build();' real 0m9.633s user 0m8.613s sys 0m1.020s $ cp ../usr/lib/julia/sys-o.a . # Get the -o.a from the old sysimage $ ar x sys-o.a # Extract it into text.o and data.o $ rm data.o # rm the serialized sysimg data $ mv text.o text-old.o $ llvm-objcopy --remove-section .data.jl.unique text-old.o # rm the link between the native code and the old sysimg data $ ar x chained.o.a # Extract new sysimage files $ gcc -shared -o chained.so text.o data.o text-old.o # Link everything $ ../julia --sysimage=chained.so ``` As can be seen, regenerating the system image took about 9s (the subsequent commands aren't timed here, but take less than a second total). This compares very favorably with a non-chained sysimg rebuild: ``` time ./usr/bin/julia --sysimage=usr/lib/julia/sys.so --output-o nonchained.o.a -e 'Base.__init_build();' real 2m42.667s user 2m39.211s sys 0m3.452s ``` Of course if you do load additional packages, the extra code does still need to be compiled, so e.g. building a system image for `Plots` goes from 3 mins to 1 mins (building all of plots, plus everything in base that got invalidated). That is still all in LLVM though - it should be relatively straightforward to multithread that after this PR (since linking the sysimg in multiple pieces is allowed). That part is not implemented yet though. 14 April 2021, 01:31:50 UTC
a84e765 Make multiversioning optional The multiversioning pass currently does two things: - Clone all functions and create a set of tables to tell the sysimage loader where to find the various cloned functions. - Compress the table of pointers by going from 64 bit pointers to 32 bit offsets from the first function of the .text section. The second optimization is useful, because it cuts down on space and speed up dynamic loading. Unfortunately relocations of this kind are not expressible in all object formats and as a result this scheme does not work if the table needs to describe function pointers in multiple compilation units. I'm working on improving the performance of incremental system image rebuilds which would rely on being able to re-link such system images and is thus incomptabile with this compression. There are possible ways, to make it compatible, namely: - Add a relocation to all the relevant file formats that expresses offsets from the start of the section, or, - Change the multiversion table to be pcrel rather than relative to the first function in the table. The first would require some signifcant coordination with standards bodies, and both are currently not supported in LLVM. To make progress on this issue, simply make the multiversion pass optional and keep the table uncompressed in this case. This wastes some space and adds a few fractions of a second to the system image load time, but it should let us proceed on the incremental sysimage project. If it works well, we can go back and consider the future of the multiversioning tables. 13 April 2021, 22:40:43 UTC
45c518d improve fastmath for `exp` and friends (#40223) * improve fastmath for scalars * fix typo in exp_impl_fast(::Float64) * fix whitespace * Rebase on master * Update base/special/exp.jl Co-authored-by: Mustafa M <mus-m@outlook.com> * Update base/special/exp.jl Co-authored-by: Mustafa M <mus-m@outlook.com> * address review Co-authored-by: Mustafa M <mus-m@outlook.com> 13 April 2021, 21:25:29 UTC
d88ed01 define dot between AbstractMatrix and UniformScaling (#40250) * define dot between AbstractMatrix and UniformScaling * fix equality check * fix for complex * add news entry 13 April 2021, 20:46:49 UTC
b01a0cb Merge pull request #40450 from JuliaLang/vc/perf_docs Update `perf` docs 13 April 2021, 13:40:16 UTC
4a19b75 Add vim bindings to TerminalMenus (#37940) * `k` to move up * `j` to move down * `<space>` as an alternative to `<enter>` 13 April 2021, 08:31:47 UTC
2ba139c Merge pull request #40386 from JuliaLang/fe/date-parse Add type asserts to (try)parse(::TimeType, ...) to help inference. 13 April 2021, 04:20:10 UTC
2646c43 Update `perf` docs `-k 1` must be passed for jit injection to work later. 13 April 2021, 00:36:04 UTC
53603f6 Fix wine bootstrap (#40425) * Fix wine bootstrap Fixes #39124 Closes #39022 * fix cross-build, and other build issues * this should probably be part of spawn, if it is needed * Revert "this should probably be part of spawn, if it is needed" This reverts commit eb88a9cf06308a1edb27b15cf1dbb0aff8ae980a. Seems to be needed * fixup! fix cross-build, and other build issues Co-authored-by: Jameson Nash <vtjnash@gmail.com> 12 April 2021, 23:24:42 UTC
011d6f0 fix verbose IRCode printing with long file names (#40437) 12 April 2021, 19:06:11 UTC
c649ebb fix #39982, reduce cursor artifacts in REPL after #39538 (#40411) 12 April 2021, 18:36:46 UTC
c3c8ffa fix #32843, codegen attempting `typeof(NULL)` for some union tags (#40365) also fixes part of #40065 11 April 2021, 20:39:33 UTC
8fc38a4 [automated] Bump the Pkg stdlib from 74098fe7 to 879c21d9 (#40422) 11 April 2021, 17:18:58 UTC
0a6ea9f fix some typos (#40434) Fix typos in comments 11 April 2021, 15:08:45 UTC
d29126a doc: fix typo in io.jl (#40433) 11 April 2021, 11:54:40 UTC
6844259 Preserve Hessenberg shape when possible (#40039) * Preserve Hessenberg shape when possible * Remove obsolete comments * Add NEWS * Support for unitful Hessenberg matrices * Mark some tests for unitful matrices as broken 11 April 2021, 11:52:37 UTC
5b7f4c5 Fix eigvals(:::SymTridagonal) with longer off-diagonal vector (#40165) * Fix eigvals(:::SymTridagonal) with longer off-diagonal vector * Update tridiag.jl * Update lapack.jl * Revert "Update lapack.jl" This reverts commit 5c4047689c42a6fb4292aa3e6ceff3506e770142. * Update lapack.jl 11 April 2021, 05:42:03 UTC
c87d85f Update contributing guide with new video links (#40426) * Update contributing guide with new links * Update CONTRIBUTING.md 10 April 2021, 17:58:39 UTC
f9c6d98 Add LBT checksums and bump versions in all the places. (#40429) * Add LBT checksums * remove old checksums * Change LBT version in various places 10 April 2021, 17:55:41 UTC
e260f2b fix a typo in TOML error message (#40428) * fix a typo in TOML error message 10 April 2021, 16:32:45 UTC
008275c doc: fix examples with invalid MIME type (#40427) 10 April 2021, 10:18:38 UTC
fc69c9a Allow any f for sum/minimum/maximum(f, v::AbstractSparseVector) (#29884) * sum/minimum/maximum(f, v::AbstractSparseVector) generalize sum/minimum/maximum(abs/abs2, v::AbstractSparseVector) to arbitrary f * add broken sum(f, [])==0 tests for reference 10 April 2021, 01:59:56 UTC
bb608e5 regex: remove error when accessing an unset group (#40391) closes #31456 09 April 2021, 23:17:33 UTC
722f90f [REPL] Implement basic pager using TerminalMenus (#38956) 09 April 2021, 23:13:07 UTC
21eb1b6 add some assorted subtyping tests (#20627) 09 April 2021, 23:09:35 UTC
2f0156a [automated] Bump the Tar stdlib from ac4d442 to 86825ec (#40421) Co-authored-by: Dilum Aluthge <dilum@aluthge.com> 09 April 2021, 22:26:20 UTC
54c7002 Improve flow of documentation for non-standard strings (#40057) 09 April 2021, 18:18:09 UTC
4996445 Add U+2AEA (⫪) and U+2AEB (⫫) to binary operators (#39403) 09 April 2021, 14:19:28 UTC
b838cdf Implemented bitwise nand and nor (#40339) 09 April 2021, 14:16:03 UTC
90bea03 remove unnecessary `@generated` from literal_pow (#40408) This was added before the Compiler could constant-prop, now it will just get in the way of general inferability. 09 April 2021, 11:19:38 UTC
752e459 Introduce ArrayContainer in performance tips (#36542) 09 April 2021, 10:19:05 UTC
40e57aa Dot-broadcasting for short-circuiting ops .&& and .|| (#39594) I have long wanted a proper fix for issue #5187. It was the very first Julia issue I filed. This is a shot at such a fix. This PR: * Enables parsing for `.&&` and `.||`. They are parsed into `Expr(:call, :.&&, ...)` expressions at the same precedence as their respective `&&` and `||`: ```julia-repl julia> Meta.show_sexpr(:(a .&& b)) (:call, :.&&, :a, :b) ``` * Unlike all other dotted operators `.op` (like `.+`), the `op`-alone part (`var"&&"`) is not an exported name from Base. As such, this effectively lowers to `broadcasted((x,y)->x && y, ...)`, but instead of using an anonymous function I've named it `Base.andand` and `Base.oror`: ```julia-repl julia> Meta.@lower a .&& b :($(Expr(:thunk, CodeInfo( @ none within `top-level scope' 1 ─ %1 = Base.broadcasted(Base.andand, a, b) │ %2 = Base.materialize(%1) └── return %2 )))) ``` * I've used a named function to enable short-circuiting behavior _within the broadcast kernel itself_. In the case that the second argument is a part of the same fused broadcast kernel, it will only evaluate if required: ```julia-repl julia> mutable struct F5187; x; end julia> (f::F5187)(x) = (f.x += x) julia> (iseven.(1:4) .|| (F5187(0)).(ones(4))) 4-element Vector{Real}: 1.0 true 2.0 true ``` Co-authored-by: Simeon Schaub <simeondavidschaub99@gmail.com> 09 April 2021, 03:48:12 UTC
c2ec70c inference: limit single-level nested `Type` signature (#40379) Previously `type_more_complex` returns `false` for `Type{Type{...}}` compared against `Type{...}`. Per comment there, this should return `true`, but the code was ordered incorrect (it was also missing support for Vararg, after the recent changes). Fixes #40336 Co-authored-by: Shuhei Kadowaki <aviatesk@gmail.com> 09 April 2021, 03:10:57 UTC
b539198 docs: more scope lawyering (re #40238) (#40394) 08 April 2021, 21:08:24 UTC
7d6dfe1 faster expm1 (#37440) Faster and slightly more accurate (and all Julia). 08 April 2021, 20:04:14 UTC
1defc11 remove method definition for `Int` in test/core.jl (#40380) 08 April 2021, 19:59:27 UTC
d3b012b Merge pull request #40364 from JuliaLang/jn/searchsorted-unsigned-bug searchsorted ranges: simplify code, fix bug with Unsigned needle 08 April 2021, 19:43:43 UTC
5b6edad avoid calling dlerror unless absolutely necessary (#40392) Most platforms implement this sensibly, but POSIX does not require that, so FreeBSD does not implement this sensibly. But we can mostly avoid the problems on FreeBSD by avoiding calling it unless we absolutely must. Fixes #39582 08 April 2021, 19:43:01 UTC
f021c67 Fix temp install of BugReporting.jl (#40403) Fixes #40398 08 April 2021, 17:45:20 UTC
41857b5 Bump MACOSX_VERSION_MIN from 10.9 to 10.10 (#40400) Fixes #39363 (BinaryBuilder already made this change) 08 April 2021, 17:07:31 UTC
b373a9a Fix signed integer overflow in `mapreduce_impl` (#38643) This PR solves #38627 as regards the code in reducedim.jl, reduce.jl and reinterpretarray.jl. It does not yet solve all the relevant issues with missing.jl: in the code there for _mapreduce and mapreduce_impl, there are still several instances of the construct: ``` while i <= ilast ... i += 1 end ``` This overflows when ilast == typemax(Int). More seriously, inside the while loops there is often `@inbounds A[i]`, which is then an out-of-bounds read! 08 April 2021, 16:58:18 UTC
9814bd6 Avoid AbstractString in GitError struct to make extraction inferred. (#40402) This significantly reduces the number of invalidated methods when loading ProgressLogging. 08 April 2021, 16:54:19 UTC
35157d9 doc: clarify example returning a tuple (#40353) 08 April 2021, 16:53:44 UTC
3060edb fix #33413, crash with `cglobal(dlsym(...))` (#37910) 08 April 2021, 16:46:02 UTC
fe09ad9 Add comments to runtests.jl to explain the `net_on`/loopback situation (#40359) 08 April 2021, 16:34:12 UTC
0869969 Bump OpenBLAS_jll to `v0.3.13+5` (#40396) * Bump OpenBLAS_jll to `v0.3.13+5` This should fix the illegal instruction errors older processors are running into. * Fix doctests * Update checksums Co-authored-by: Viral B. Shah <viral@mayin.org> 08 April 2021, 16:05:57 UTC
cc1e70a fix #40337, no error info from serialized TaskFailedException (#40395) 08 April 2021, 15:37:31 UTC
027bd4a Replace _iszero by iszerodefined && iszero (#38789) This PR defines an iszerodefined function that custom types implements in case iszero is well-defined even if zero is not defined. Take 2 of #36194 after it was reverted in #38764. What was missing in #36194 is that in case iszero is not working for a given type, we should drop the structure and fall back to an Array. 08 April 2021, 04:56:34 UTC
b05f94d doc: hint on how to type the ÷ sign (#38762) The ÷ sign is the only operator in this chapter which has no dedicated key on the keyboard. With the Unicode input being at the very end of the documentation, newcomers probably do not know how to write the integer division sign. Therefore, I added this short hint on how to type it. 08 April 2021, 04:54:35 UTC
6117388 Widen type signature of bytes2hex (#39710) and make it slightly faster! Also improves error message on hex2bytes! when passing a non-ASCII string, And ADD compat notice, fix implementation to be more generic in regards to AbstractString. 08 April 2021, 02:58:13 UTC
549380d If module is missing a docstring show readme if available (#39093) * print available readme if no docstring for module * tweak search & print * handle pathless modules * limit readme print to first 200 lines * review changes * print message on single line * handle modules in sysimage that are missing src files * tweak formatting * fix docstring test 08 April 2021, 02:13:55 UTC
0da808d add option to `compilecache` so that Pkg precompilation can not skip different versions of loaded modules (#40345) * allow Pkg precomp to not skip loaded modules * rename to ignore_loaded_modules * arg alignment 08 April 2021, 01:11:05 UTC
35a186b Only print a single `LoadError:` prefix for nested LoadErrors during showerror (#38725) * fold repeated `LoadError :` prints during showerror * Only print a single LoadError: prefix 08 April 2021, 01:07:31 UTC
263451e Allow setting lower bound on Experimental.@optlevel (#39536) * allow setting lower bound on Experimental.at-optlevel * rename arg to min-optlevel * Apply suggestions from code review Co-authored-by: Jeff Bezanson <jeff.bezanson@gmail.com> * more suggestions from code review Co-authored-by: Jeff Bezanson <jeff.bezanson@gmail.com> 08 April 2021, 00:58:21 UTC
76c1d1d [Test] Define `broken`/`skip` keyword argument for `@test` (#39322) * [Test] Define `broken`/`skip` keyword argument for `@test` They make it less tedious having tests failing consistently only under specific conditions. * [Test] Use new `@test ... broken=cond` in some tests 07 April 2021, 18:48:19 UTC
d02aba4 Bump libblastrampoline to v3.0.4 (#40381) This should fix some armv7l issues, as libblastrampoline had the same issues in its armv7l trampolines as Julia itself had. It also fixes some errors in armv7l interface autodetection. 07 April 2021, 16:11:12 UTC
5a0d827 Merge pull request #40378 from JuliaLang/cv/deserialize-msg-error Provide an error message for `Distributed.deserialize_msg` 07 April 2021, 15:54:08 UTC
8a14ef2 Add type asserts to (try)parse(::TimeType, ...) to help inference. 07 April 2021, 06:50:52 UTC
8218480 Add docs for _ as a variable (#40183) 07 April 2021, 05:29:20 UTC
7352320 Remove a few redundant diagonal `ldiv!` methods (#38484) 06 April 2021, 21:48:26 UTC
df48fb6 test: simple tests for hash_64_32 and hash_32_32 (#35520) Tests to help improve coverage 06 April 2021, 21:47:51 UTC
70333da don't use realpath in Sys.which (#40233) As [discussed recently on discourse](https://discourse.julialang.org/t/weird-sys-which-function/58070), some programs require a certain executable name to function correctly, and behave badly if you call `realpath` to expand symbolic links (potentially changing the program name). c.f. discussion in #26559, implemented `Sys.which` 06 April 2021, 21:41:07 UTC
d9f0f04 Add `lock` wrapper for Channels (#39312) Added lock(f, c::Channel) utility function 06 April 2021, 21:39:38 UTC
2e1de7d doc: update reducedim.jl to fix a few doc strings (#40351) Closes #40300, and fixes other docs discrepancies 06 April 2021, 21:39:03 UTC
336cdf8 [build] Add `symlink_system_library` calls for CSL (#40217) * [build] Add `symlink_system_library` calls for CSL We differentiate between a `USE_BINARYBUILDER_CSL=0` configuration (where we copy the CSL libraries into the Julia build tree) versus a `USE_SYSTEM_CSL=1` configuration (where we symlink them in a manner similar to other system libararies) * Expand `JL_PRIVATE_LIBS-1` for versioned library names as well Without this, we fail to install things like `libgcc_s.so.1` when installed into the private libdir by `symlink_system_libraries`. 06 April 2021, 21:10:05 UTC
54b610b Show methods for LBTConfig and LBTLibraryInfo (#40357) * show methods for LBTConfig and LBTLibraryInfo * add interface information to LBTConfig printing * interface information in show fallback of LBTConfig and LBTLibraryInfo * LBTConfig(...) instead of LBTConfig() for n>3 libs 06 April 2021, 20:35:00 UTC
79e198b fix #40249, reshaping SharedArray on another process (#40286) 06 April 2021, 19:35:18 UTC
e34a904 Allow enabling multiple external profilers in build (#38741) 06 April 2021, 18:30:31 UTC
e3c0dec errorshow: fix bad test from #40304 (#40376) This conflicted with a test in core.jl for callable numbers 06 April 2021, 17:59:29 UTC
9f8cc3d Remove unnecessary multiple returns 06 April 2021, 16:46:54 UTC
4489288 Provide an error message for deserialize_msg 06 April 2021, 16:46:23 UTC
2fc32f2 Update Emoji Completions (#39111) * Update Emoji Completions * =new should overwrite old 06 April 2021, 15:19:22 UTC
bda6b94 ensure require_one_based_indexing can constant-fold for ranges (#40358) Refs performance issue noted in #38527 06 April 2021, 15:07:15 UTC
fedefe9 Normalize (simplify) `UnionAll`s when used as type parameter (#36211) 06 April 2021, 03:03:45 UTC
40d4f4a searchsorted ranges: simplify code, fix bug with Unsigned needle This avoids computing `length` unnecessarily, which often requires a division, and is therefore often expensive. 06 April 2021, 01:14:02 UTC
454fc51 argmin ranges bug: you cannot pass an unsorted array to searchsorted 06 April 2021, 01:14:02 UTC
b780905 Fix real matrix sqrt and log for edge cases (#40144) * Add failing tests * Improve 2x2 real sqrt for scalar diagonal * Avoid sylvester if zero is a solution * Avoid unnecessary sqrt * Use correct variable names * Avoid erroring due to NaNs * Exactly adapt Higham's algorithm, with hypot * Remove unreachable branch * Add failing tests * Handle overflow/underflow * Invert instead of dividing * Apply d=0 constraint from standardized real schur form * Handle underflow * Avoid underflow/overflow in log diagonal blocks * Add tests for log underflow/overflow 05 April 2021, 17:37:56 UTC
58fba2b Use 0.3.13+4 openblas binaries to fix #40279 (#40343) * Use 0.3.13+4 openblas binaries to fix #40279 * Add tests and doctest fixes for #40343 (#40346) * Update checksums * changed a doctest to have nicer output Co-authored-by: Pablo San-Jose <lekand@gmail.com> 04 April 2021, 23:29:44 UTC
89fff18 Fix relpath when path and startpath are in the same drive (#40323) * Fix relpath when path and startpath are in the same drive When startpath == ".", assume the startpath is in the same drive. This subsequently required tweaking the existing logic to then canonicalize the drive casing in instances where the drive casing differs. 04 April 2021, 09:54:36 UTC
0596d51 remove UndefVarError deprecation from v0.5 (#40333) Looks like this got lost in deprecation removal? 04 April 2021, 05:39:57 UTC
3c0ad21 test: fix bad copy in #40304 (#40334) 03 April 2021, 22:55:19 UTC
d0438c0 Revert "Fix some inferability issues in SparseArrays" (#40332) 03 April 2021, 22:53:20 UTC
b0b4a48 fix inconsistent BroadcastFunction behavior (#40330) fixes #40309 03 April 2021, 18:43:43 UTC
595b0e6 correct reverseind example for Unicode (#40156) 03 April 2021, 18:40:13 UTC
c90e8e1 Clean up of Boolean range indexing (#39993) This PR references the following comments: https://github.com/JuliaLang/julia/pull/31829/files#r592887561 https://github.com/JuliaLang/julia/pull/31829/files#r592887003 https://github.com/JuliaLang/julia/pull/39962/files#r592888379 03 April 2021, 18:39:47 UTC
12b8948 Fixed segfault when adding OffsetArray and UniformScaling (#38544) 03 April 2021, 18:24:06 UTC
8b6a778 Add test for Unicode named subpatterns and property mixes of scripts and classes. (#40328) 03 April 2021, 18:18:03 UTC
d8b7302 doc: Add example for NaN comparison (#38953) 03 April 2021, 17:22:48 UTC
78d3ff4 Use dot and views in QR code (#38973) The QR-code is quite ancient, and was written without using other linalg routines because views were expensive then. This lets LinearAlgebra to use dot and norm and such, which are likely optimized for special number types. 03 April 2021, 17:15:20 UTC
ad513ca docs: Reference functions instead of methods (#38986) By referencing methods sometimes and not just functions, there was some duplication and confusion. For instance, we had `get(::Any, ::Any, ::Any)` method and also a `get` function, the latter of which duplicated the documentation for the former on the same page. 03 April 2021, 17:12:10 UTC
ff316b2 Merge pull request #39207 from JuliaLang/mh/sparse-type-stability Fix some inferability issues in SparseArrays 03 April 2021, 17:06:23 UTC
03ec87f Adds method to summary() for functions (#39173) 03 April 2021, 16:55:01 UTC
28e63dc Add register_error_hint for UndefVarError (#39850) * add show_error_hints for UndefVarError Hi, I just include the show_error_hints part from #39089 Further relevant discussion in [discourse](https://discourse.julialang.org/t/help-with-register-error-hint/56140/4) * Update errorshow.jl * Update Base.jl Co-authored-by: Simeon Schaub <simeondavidschaub99@gmail.com> 03 April 2021, 16:08:50 UTC
9c50643 Add hint in case of missing operator (#40304) * Add hint for missing operators * Move hint to it's own error type * Clear the hint handler after displaying hint * Don't clear the already empty array in tests * Don't pop the hint handler * Rename handler 03 April 2021, 16:08:35 UTC
2ee8c87 doc: add cross references in subset-related operators (#39750) 03 April 2021, 15:39:59 UTC
aaf2b9f Verbalize definition of isapprox in docstring (#39765) * Verbalize definition of isapprox * More examples for isapprox 03 April 2021, 12:43:09 UTC
8d1f052 make fuzzy scoring more robust against whitespaces (#39932) 03 April 2021, 12:36:55 UTC
78b629f Add a method to similar with Integers (#39933) 03 April 2021, 12:35:26 UTC
872954e document rtol and atol for ≈ in at-test macro (#40061) * document rtol and atol for ≈ in at-test macro * Update stdlib/Test/docs/src/index.md Co-authored-by: Stefan Karpinski <stefan.karpinski@post.harvard.edu> * Update stdlib/Test/docs/src/index.md Co-authored-by: Stefan Karpinski <stefan.karpinski@post.harvard.edu> Co-authored-by: Jameson Nash <vtjnash@gmail.com> 03 April 2021, 12:19:26 UTC
bf1ab0e make radical operators juxtaposable (#40173) * make radical operators juxtaposable * fix test * update NEWS.md [skip ci] Co-authored-by: Jameson Nash <vtjnash@gmail.com> 03 April 2021, 12:18:10 UTC
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