0b0be3e | NikVard | 14 February 2023, 10:07:04 UTC | [FIX] modified parallel_run2.sh | 14 February 2023, 10:07:04 UTC |
afeda5e | NikVard | 15 December 2022, 10:00:14 UTC | [UPDATE] figure scripts updated | 15 December 2022, 10:00:14 UTC |
0a06681 | NikVard | 05 December 2022, 10:39:14 UTC | [FIX] multiple changes in figure 2 + simulation_dumb.py now does not record currents | 05 December 2022, 10:39:14 UTC |
0f022f7 | NikVard | 05 December 2022, 10:37:07 UTC | [FIX] resolved merge conflict on parameters_multi.py | 05 December 2022, 10:37:07 UTC |
cf9ee1f | NikVard | 05 December 2022, 10:32:39 UTC | [FIX] cluster parameters_multi.py | 05 December 2022, 10:32:39 UTC |
253490e | NikVard | 02 December 2022, 11:09:31 UTC | [FIX] fixed marker sizes; computing PSD w/ tensorpac; 8s data | 02 December 2022, 11:09:31 UTC |
191053b | NikVard | 29 November 2022, 13:38:27 UTC | [FIX] various fixes + added fig4_supp script | 29 November 2022, 13:38:27 UTC |
180d0f5 | NikVard | 25 November 2022, 14:22:53 UTC | [UPDATE] plot functions | 25 November 2022, 14:22:53 UTC |
bcbb2f3 | NikVard | 16 November 2022, 13:24:32 UTC | [FIX] Multiple plot improvements for publication (16/11/2022) | 16 November 2022, 13:24:32 UTC |
683daff | NikVard | 28 October 2022, 14:57:28 UTC | [FIX] added bandpower function and plotting figures 2/3 | 28 October 2022, 14:57:28 UTC |
cf98bef | NikVard | 14 October 2022, 15:27:33 UTC | [ADD] added code for generating fig1_D | 14 October 2022, 15:27:33 UTC |
f8baf9b | NikVard | 12 October 2022, 09:33:37 UTC | [FIX] multiple fixes and plotting script additions | 12 October 2022, 09:33:37 UTC |
300e421 | NikVard | 29 September 2022, 08:54:21 UTC | [FIX] removed old phase configs | 29 September 2022, 08:54:21 UTC |
d025cb1 | NikVard | 29 September 2022, 08:50:28 UTC | [FIX] figures 2-3 and PRC_calc | 29 September 2022, 08:50:28 UTC |
9010ed2 | NikVard | 27 September 2022, 15:52:59 UTC | [FIX] division with nA in saving currents shows actual data | 27 September 2022, 15:52:59 UTC |
4b8d5c3 | NikVard | 27 September 2022, 14:41:34 UTC | [FIX] Saved current filenames have now an underscore for readability | 27 September 2022, 14:41:34 UTC |
8fd531f | NikVard | 27 September 2022, 12:14:49 UTC | Merge branch 'fig2_panels' | 27 September 2022, 12:14:49 UTC |
4526005 | NikVard | 27 September 2022, 12:13:05 UTC | Merge branch 'fig2_panels' of github.com:NikVard/memstim-hh into fig2_panels | 27 September 2022, 12:13:05 UTC |
949fbe3 | NikVard | 27 September 2022, 12:11:12 UTC | [FIX] fontsize for specgram changed | 27 September 2022, 12:11:12 UTC |
2e94162 | NikVard | 27 September 2022, 12:07:48 UTC | Merge branch 'master' of https://github.com/NikVard/memstim-hh | 27 September 2022, 12:07:48 UTC |
fe75df2 | NikVard | 27 September 2022, 12:07:33 UTC | [FIX] modified server-side files | 27 September 2022, 12:07:33 UTC |
9a2c788 | Nikolaos Vardalakis | 27 September 2022, 09:30:31 UTC | Merge pull request #2 from NikVard/fig2_panels Fig2 panels | 27 September 2022, 09:30:31 UTC |
0b0196e | NikVard | 27 September 2022, 09:27:07 UTC | [RES-] more removals | 27 September 2022, 09:27:07 UTC |
3fa30fb | NikVard | 27 September 2022, 09:25:13 UTC | [RES-] more removals | 27 September 2022, 09:25:13 UTC |
57526da | NikVard | 27 September 2022, 09:23:48 UTC | [RES-] removed unused results | 27 September 2022, 09:23:48 UTC |
a524083 | NikVard | 27 September 2022, 09:12:46 UTC | [FIX] modified files to make panels as to be included in the paper | 27 September 2022, 09:12:46 UTC |
f3ccf2f | NikVard | 14 September 2022, 14:17:03 UTC | [FIX] fixed comments | 14 September 2022, 14:17:03 UTC |
5b76067 | NikVard | 14 September 2022, 09:52:33 UTC | [FIX] moved frequency analysis functions out of fig2 script for generalized usage | 14 September 2022, 09:52:33 UTC |
c2f794b | NikVard | 14 September 2022, 08:27:15 UTC | [ADD] Added PSD function | 14 September 2022, 08:27:15 UTC |
0147549 | NikVard | 14 September 2022, 08:16:08 UTC | [FIX] added missing group S2R to the network - phase reset works again | 14 September 2022, 08:16:08 UTC |
4d83fb5 | NikVard | 12 August 2022, 07:29:31 UTC | [FIX] added option for current monitors in the run_sim file | 12 August 2022, 07:29:31 UTC |
50c4d24 | NikVard | 11 August 2022, 08:37:21 UTC | [ADD] Kuramoto open-loop test kN | 11 August 2022, 08:37:21 UTC |
c5b4821 | NikVard | 11 August 2022, 08:33:57 UTC | [FIX] tested and running with the oscillators and plots fig2 accurately | 11 August 2022, 08:33:57 UTC |
4723fd2 | NikVard | 09 August 2022, 15:26:07 UTC | [RES] stim 10nA EC results using old parameters | 09 August 2022, 15:26:07 UTC |
a29d084 | NikVard | 09 August 2022, 14:23:07 UTC | [RES+] more results for stim 10nA @ EC | 09 August 2022, 14:23:07 UTC |
e3ccf3f | NikVard | 09 August 2022, 13:11:21 UTC | [RES] input scaling w/ 10nA stim @ EC | 09 August 2022, 13:11:21 UTC |
375b873 | NikVard | 09 August 2022, 13:10:21 UTC | [FIX] fixed error message and exception handling | 09 August 2022, 13:10:21 UTC |
6c37cc0 | NikVard | 09 August 2022, 13:09:44 UTC | [RES-] CLEANUP | 09 August 2022, 13:09:44 UTC |
c7833bb | NikVard | 09 August 2022, 13:04:14 UTC | [RES] input scaling w/ 10nA stim @ EC | 09 August 2022, 13:04:14 UTC |
9c628c5 | NikVard | 09 August 2022, 08:29:19 UTC | [RES] Added stim results with incrementing inputs | 09 August 2022, 08:29:19 UTC |
1143b8d | NikVard | 09 August 2022, 07:35:31 UTC | [RES-] Removed wrong results | 09 August 2022, 07:35:31 UTC |
a7515a6 | NikVard | 09 August 2022, 07:29:42 UTC | [RES] Added more results for reverberation during input scaling testing | 09 August 2022, 07:29:42 UTC |
e557b41 | NikVard | 08 August 2022, 15:22:40 UTC | [RES] added stimulation results (crit. vals) for EC/CA1 | 08 August 2022, 15:22:40 UTC |
24646ce | NikVard | 08 August 2022, 13:31:57 UTC | [RES] stim CA1/EC [1-10]nA | 08 August 2022, 13:31:57 UTC |
1cbbaa2 | NikVard | 08 August 2022, 11:19:20 UTC | [RES] added results for stimulation [0-1]nA using new parameters | 08 August 2022, 11:19:20 UTC |
8711e0a | NikVard | 08 August 2022, 11:17:36 UTC | [FIX] stimulation is now an array, as it should be | 08 August 2022, 11:17:36 UTC |
cf50526 | NikVard | 08 August 2022, 11:16:34 UTC | [FIX] Params multi now supports old parameter generation | 08 August 2022, 11:16:34 UTC |
b146e83 | NikVard | 08 August 2022, 10:55:58 UTC | [FIX] stimulation amplitude directory fix | 08 August 2022, 10:55:58 UTC |
4a182f8 | NikVard | 08 August 2022, 10:38:50 UTC | [R] removed wrong simulation results | 08 August 2022, 10:38:50 UTC |
dfb6d5e | NikVard | 08 August 2022, 10:31:48 UTC | [FIX] directory name changed to support decimals in stim.amplitude | 08 August 2022, 10:35:30 UTC |
8cca9ad | NikVard | 08 August 2022, 10:30:47 UTC | [RES1] Stim test - new set | 08 August 2022, 10:30:47 UTC |
14e91d7 | NikVard | 08 August 2022, 09:15:26 UTC | [FIX] parameters.py now works on windows and supports custom directories | 08 August 2022, 09:15:26 UTC |
09f343d | NikVard | 08 August 2022, 08:40:09 UTC | [FIX] stimulation fix for floats | 08 August 2022, 08:40:09 UTC |
6c7a88a | NikVard | 08 August 2022, 07:12:39 UTC | [FIX] Cluster parameters_multi.py updated with constant input | 08 August 2022, 07:12:39 UTC |
3c68c96 | NikVard | 05 August 2022, 16:55:51 UTC | [FIXES] Can now switch between fixed input and oscillators by setting the config file; fixed myplot.py to show data as in fig2 | 05 August 2022, 16:55:51 UTC |
5f167e5 | NikVard | 01 August 2022, 12:52:01 UTC | [FIX] Added stages theta OFF/ theta ON + stim/ theta OFF | 01 August 2022, 12:52:01 UTC |
aa7d5b4 | NikVard | 29 July 2022, 15:07:31 UTC | [FIX] Stimulation returns time vector; plots updated | 29 July 2022, 15:07:31 UTC |
3bb6e3a | NikVard | 29 July 2022, 08:05:29 UTC | [FIX] Kuramoto_extra figure now shows stimulation pulses | 29 July 2022, 08:05:29 UTC |
70c5929 | NikVard | 29 July 2022, 08:03:57 UTC | [FIX] include numpy | 29 July 2022, 08:03:57 UTC |
9250f3c | NikVard | 25 July 2022, 12:49:01 UTC | [FIX] minor fixes in configuration files | 25 July 2022, 12:49:01 UTC |
b69771a | NikVard | 25 July 2022, 11:55:15 UTC | [FIX] Distance-dependent stim + minor fixes (plotting fig2) | 25 July 2022, 11:55:15 UTC |
9f45cf7 | NikVard | 25 July 2022, 08:43:01 UTC | [ADD] New data analysis script | 25 July 2022, 08:43:01 UTC |
08795f3 | NikVard | 15 July 2022, 15:21:00 UTC | [NEW] Added new data analysis script | 15 July 2022, 15:21:00 UTC |
ee5399e | NikVard | 04 July 2022, 12:41:51 UTC | [FIX] removed spines | 04 July 2022, 12:41:51 UTC |
a30be4c | NikVard | 04 July 2022, 09:10:59 UTC | [MERGE] fig2 and PRC parameter selection | 04 July 2022, 09:10:59 UTC |
7621a32 | NikVard | 04 July 2022, 09:06:57 UTC | Merge branch 'fig2' | 04 July 2022, 09:06:57 UTC |
3a74b2b | NikVard | 04 July 2022, 09:06:49 UTC | [FIX] merged file for fig2_A | 04 July 2022, 09:06:49 UTC |
4d95ead | NikVard | 04 July 2022, 09:02:55 UTC | [FIX] PRC calculation with colors for FENS 2022 | 04 July 2022, 09:02:55 UTC |
19eefab | NikVard | 27 June 2022, 12:46:18 UTC | [FIX] cmap inferno | 27 June 2022, 12:46:18 UTC |
a30c508 | NikVard | 27 June 2022, 08:51:54 UTC | [FIX] bg rhythm | 27 June 2022, 08:51:54 UTC |
0367db7 | NikVard | 26 June 2022, 15:41:38 UTC | [FIX] can use imshow for spectrograms | 26 June 2022, 15:41:38 UTC |
13f58bb | NikVard | 26 June 2022, 15:40:57 UTC | [FIX] working version w/ proper colors | 26 June 2022, 15:40:57 UTC |
9493329 | NikVard | 24 June 2022, 17:07:36 UTC | [FIX] fixed replacing neuron indices | 24 June 2022, 17:07:36 UTC |
c3bd10a | NikVard | 24 June 2022, 17:05:01 UTC | Merge branch 'PRC_new_params' of github.com:NikVard/memstim-hh into PRC_new_params | 24 June 2022, 17:05:01 UTC |
9043d9c | NikVard | 24 June 2022, 17:00:24 UTC | [FIX] colormap range | 24 June 2022, 17:00:24 UTC |
2385d46 | NikVard | 24 June 2022, 15:04:24 UTC | [RES] 10/20/40nA | 24 June 2022, 15:04:24 UTC |
88fefe1 | NikVard | 24 June 2022, 13:27:26 UTC | Merge branch 'PRC_new_params' of https://github.com/NikVard/memstim-hh into PRC_new_params | 24 June 2022, 13:27:26 UTC |
e739b14 | NikVard | 24 June 2022, 13:26:38 UTC | [RES] 2/4/5nA w/ equal spacing | 24 June 2022, 13:26:38 UTC |
ff4e4b0 | NikVard | 24 June 2022, 12:10:45 UTC | [FIX] loading PRC_new | 24 June 2022, 12:10:45 UTC |
a5db61f | NikVard | 24 June 2022, 11:28:06 UTC | [FIX] removed non-even values | 24 June 2022, 11:28:06 UTC |
919f9dc | NikVard | 23 June 2022, 14:49:24 UTC | [RES] added CL dataset and phase points | 23 June 2022, 14:49:24 UTC |
0d80de7 | NikVard | 23 June 2022, 14:39:24 UTC | [RES] added PRC 5/10/20/40nA | 23 June 2022, 14:39:24 UTC |
80a2279 | NikVard | 23 June 2022, 14:37:09 UTC | [FIX] added shaded areas for muFR | 23 June 2022, 14:37:09 UTC |
c2bbf1a | NikVard | 23 June 2022, 12:56:04 UTC | Merge branch 'PRC_new_params' of https://github.com/NikVard/memstim-hh into PRC_new_params | 23 June 2022, 12:56:04 UTC |
1d0bd7a | NikVard | 23 June 2022, 12:54:55 UTC | [RESULTS] PRC (evenly-spaced) for 2/4nA | 23 June 2022, 12:54:55 UTC |
95f7377 | NikVard | 22 June 2022, 16:54:53 UTC | Merge branch 'fig2' | 22 June 2022, 16:54:53 UTC |
d122a0e | NikVard | 22 June 2022, 16:54:34 UTC | [FIX] xlims [1,3], shading, PRC code | 22 June 2022, 16:54:34 UTC |
13a9014 | NikVard | 22 June 2022, 10:30:56 UTC | [FIX] fonts+transparency for illustrator import | 22 June 2022, 10:30:56 UTC |
8073a4a | NikVard | 22 June 2022, 10:25:43 UTC | [RES] 2/5/10nA | 22 June 2022, 10:25:43 UTC |
53b667c | NikVard | 22 June 2022, 08:48:04 UTC | [-] Removed wrong simulations | 22 June 2022, 08:48:04 UTC |
925d90d | NikVard | 22 June 2022, 07:54:31 UTC | [RESULTS] 2-5-10nA | 22 June 2022, 07:54:31 UTC |
ec2e216 | NikVard | 21 June 2022, 15:32:38 UTC | [ADD] new parameters file for custom connectivity | 21 June 2022, 15:32:38 UTC |
42a89a9 | NikVard | 21 June 2022, 15:31:04 UTC | [FIX] changed rhythm to cosine | 21 June 2022, 15:31:04 UTC |
08c1833 | NikVard | 21 June 2022, 15:30:04 UTC | [FIX] this creates accurate figures w/labels | 21 June 2022, 15:30:04 UTC |
bddbb13 | NikVard | 20 June 2022, 22:28:50 UTC | [FIX] fixed plot_fig2_all() function call | 20 June 2022, 22:28:50 UTC |
63aefa2 | NikVard | 16 June 2022, 13:56:17 UTC | [FIX] Added monitors for average Vm per area per group | 16 June 2022, 13:56:17 UTC |
de61b93 | NikVard | 15 June 2022, 17:59:05 UTC | Minor code fixes | 15 June 2022, 17:59:05 UTC |
cf19072 | NikVard | 15 June 2022, 15:44:17 UTC | Renamed file | 15 June 2022, 15:44:17 UTC |
a59e5b3 | NikVard | 15 June 2022, 15:29:07 UTC | [FIX] tight layout is now used in the outer grid | 15 June 2022, 15:29:07 UTC |
d4756d1 | NikVard | 15 June 2022, 08:18:49 UTC | [FIX] fixed rhythm (now cosine) and PRC (now -sin(Theta + offset)) | 15 June 2022, 08:19:32 UTC |