swh:1:snp:c2e27ce82d59e51c3aa0d7aaece24f9f6f9a2889

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Revision Author Date Message Commit Date
0b0be3e [FIX] modified parallel_run2.sh 14 February 2023, 10:07:04 UTC
afeda5e [UPDATE] figure scripts updated 15 December 2022, 10:00:14 UTC
0a06681 [FIX] multiple changes in figure 2 + simulation_dumb.py now does not record currents 05 December 2022, 10:39:14 UTC
0f022f7 [FIX] resolved merge conflict on parameters_multi.py 05 December 2022, 10:37:07 UTC
cf9ee1f [FIX] cluster parameters_multi.py 05 December 2022, 10:32:39 UTC
253490e [FIX] fixed marker sizes; computing PSD w/ tensorpac; 8s data 02 December 2022, 11:09:31 UTC
191053b [FIX] various fixes + added fig4_supp script 29 November 2022, 13:38:27 UTC
180d0f5 [UPDATE] plot functions 25 November 2022, 14:22:53 UTC
bcbb2f3 [FIX] Multiple plot improvements for publication (16/11/2022) 16 November 2022, 13:24:32 UTC
683daff [FIX] added bandpower function and plotting figures 2/3 28 October 2022, 14:57:28 UTC
cf98bef [ADD] added code for generating fig1_D 14 October 2022, 15:27:33 UTC
f8baf9b [FIX] multiple fixes and plotting script additions 12 October 2022, 09:33:37 UTC
300e421 [FIX] removed old phase configs 29 September 2022, 08:54:21 UTC
d025cb1 [FIX] figures 2-3 and PRC_calc 29 September 2022, 08:50:28 UTC
9010ed2 [FIX] division with nA in saving currents shows actual data 27 September 2022, 15:52:59 UTC
4b8d5c3 [FIX] Saved current filenames have now an underscore for readability 27 September 2022, 14:41:34 UTC
8fd531f Merge branch 'fig2_panels' 27 September 2022, 12:14:49 UTC
4526005 Merge branch 'fig2_panels' of github.com:NikVard/memstim-hh into fig2_panels 27 September 2022, 12:13:05 UTC
949fbe3 [FIX] fontsize for specgram changed 27 September 2022, 12:11:12 UTC
2e94162 Merge branch 'master' of https://github.com/NikVard/memstim-hh 27 September 2022, 12:07:48 UTC
fe75df2 [FIX] modified server-side files 27 September 2022, 12:07:33 UTC
9a2c788 Merge pull request #2 from NikVard/fig2_panels Fig2 panels 27 September 2022, 09:30:31 UTC
0b0196e [RES-] more removals 27 September 2022, 09:27:07 UTC
3fa30fb [RES-] more removals 27 September 2022, 09:25:13 UTC
57526da [RES-] removed unused results 27 September 2022, 09:23:48 UTC
a524083 [FIX] modified files to make panels as to be included in the paper 27 September 2022, 09:12:46 UTC
f3ccf2f [FIX] fixed comments 14 September 2022, 14:17:03 UTC
5b76067 [FIX] moved frequency analysis functions out of fig2 script for generalized usage 14 September 2022, 09:52:33 UTC
c2f794b [ADD] Added PSD function 14 September 2022, 08:27:15 UTC
0147549 [FIX] added missing group S2R to the network - phase reset works again 14 September 2022, 08:16:08 UTC
4d83fb5 [FIX] added option for current monitors in the run_sim file 12 August 2022, 07:29:31 UTC
50c4d24 [ADD] Kuramoto open-loop test kN 11 August 2022, 08:37:21 UTC
c5b4821 [FIX] tested and running with the oscillators and plots fig2 accurately 11 August 2022, 08:33:57 UTC
4723fd2 [RES] stim 10nA EC results using old parameters 09 August 2022, 15:26:07 UTC
a29d084 [RES+] more results for stim 10nA @ EC 09 August 2022, 14:23:07 UTC
e3ccf3f [RES] input scaling w/ 10nA stim @ EC 09 August 2022, 13:11:21 UTC
375b873 [FIX] fixed error message and exception handling 09 August 2022, 13:10:21 UTC
6c37cc0 [RES-] CLEANUP 09 August 2022, 13:09:44 UTC
c7833bb [RES] input scaling w/ 10nA stim @ EC 09 August 2022, 13:04:14 UTC
9c628c5 [RES] Added stim results with incrementing inputs 09 August 2022, 08:29:19 UTC
1143b8d [RES-] Removed wrong results 09 August 2022, 07:35:31 UTC
a7515a6 [RES] Added more results for reverberation during input scaling testing 09 August 2022, 07:29:42 UTC
e557b41 [RES] added stimulation results (crit. vals) for EC/CA1 08 August 2022, 15:22:40 UTC
24646ce [RES] stim CA1/EC [1-10]nA 08 August 2022, 13:31:57 UTC
1cbbaa2 [RES] added results for stimulation [0-1]nA using new parameters 08 August 2022, 11:19:20 UTC
8711e0a [FIX] stimulation is now an array, as it should be 08 August 2022, 11:17:36 UTC
cf50526 [FIX] Params multi now supports old parameter generation 08 August 2022, 11:16:34 UTC
b146e83 [FIX] stimulation amplitude directory fix 08 August 2022, 10:55:58 UTC
4a182f8 [R] removed wrong simulation results 08 August 2022, 10:38:50 UTC
dfb6d5e [FIX] directory name changed to support decimals in stim.amplitude 08 August 2022, 10:35:30 UTC
8cca9ad [RES1] Stim test - new set 08 August 2022, 10:30:47 UTC
14e91d7 [FIX] parameters.py now works on windows and supports custom directories 08 August 2022, 09:15:26 UTC
09f343d [FIX] stimulation fix for floats 08 August 2022, 08:40:09 UTC
6c7a88a [FIX] Cluster parameters_multi.py updated with constant input 08 August 2022, 07:12:39 UTC
3c68c96 [FIXES] Can now switch between fixed input and oscillators by setting the config file; fixed myplot.py to show data as in fig2 05 August 2022, 16:55:51 UTC
5f167e5 [FIX] Added stages theta OFF/ theta ON + stim/ theta OFF 01 August 2022, 12:52:01 UTC
aa7d5b4 [FIX] Stimulation returns time vector; plots updated 29 July 2022, 15:07:31 UTC
3bb6e3a [FIX] Kuramoto_extra figure now shows stimulation pulses 29 July 2022, 08:05:29 UTC
70c5929 [FIX] include numpy 29 July 2022, 08:03:57 UTC
9250f3c [FIX] minor fixes in configuration files 25 July 2022, 12:49:01 UTC
b69771a [FIX] Distance-dependent stim + minor fixes (plotting fig2) 25 July 2022, 11:55:15 UTC
9f45cf7 [ADD] New data analysis script 25 July 2022, 08:43:01 UTC
08795f3 [NEW] Added new data analysis script 15 July 2022, 15:21:00 UTC
ee5399e [FIX] removed spines 04 July 2022, 12:41:51 UTC
a30be4c [MERGE] fig2 and PRC parameter selection 04 July 2022, 09:10:59 UTC
7621a32 Merge branch 'fig2' 04 July 2022, 09:06:57 UTC
3a74b2b [FIX] merged file for fig2_A 04 July 2022, 09:06:49 UTC
4d95ead [FIX] PRC calculation with colors for FENS 2022 04 July 2022, 09:02:55 UTC
19eefab [FIX] cmap inferno 27 June 2022, 12:46:18 UTC
a30c508 [FIX] bg rhythm 27 June 2022, 08:51:54 UTC
0367db7 [FIX] can use imshow for spectrograms 26 June 2022, 15:41:38 UTC
13f58bb [FIX] working version w/ proper colors 26 June 2022, 15:40:57 UTC
9493329 [FIX] fixed replacing neuron indices 24 June 2022, 17:07:36 UTC
c3bd10a Merge branch 'PRC_new_params' of github.com:NikVard/memstim-hh into PRC_new_params 24 June 2022, 17:05:01 UTC
9043d9c [FIX] colormap range 24 June 2022, 17:00:24 UTC
2385d46 [RES] 10/20/40nA 24 June 2022, 15:04:24 UTC
88fefe1 Merge branch 'PRC_new_params' of https://github.com/NikVard/memstim-hh into PRC_new_params 24 June 2022, 13:27:26 UTC
e739b14 [RES] 2/4/5nA w/ equal spacing 24 June 2022, 13:26:38 UTC
ff4e4b0 [FIX] loading PRC_new 24 June 2022, 12:10:45 UTC
a5db61f [FIX] removed non-even values 24 June 2022, 11:28:06 UTC
919f9dc [RES] added CL dataset and phase points 23 June 2022, 14:49:24 UTC
0d80de7 [RES] added PRC 5/10/20/40nA 23 June 2022, 14:39:24 UTC
80a2279 [FIX] added shaded areas for muFR 23 June 2022, 14:37:09 UTC
c2bbf1a Merge branch 'PRC_new_params' of https://github.com/NikVard/memstim-hh into PRC_new_params 23 June 2022, 12:56:04 UTC
1d0bd7a [RESULTS] PRC (evenly-spaced) for 2/4nA 23 June 2022, 12:54:55 UTC
95f7377 Merge branch 'fig2' 22 June 2022, 16:54:53 UTC
d122a0e [FIX] xlims [1,3], shading, PRC code 22 June 2022, 16:54:34 UTC
13a9014 [FIX] fonts+transparency for illustrator import 22 June 2022, 10:30:56 UTC
8073a4a [RES] 2/5/10nA 22 June 2022, 10:25:43 UTC
53b667c [-] Removed wrong simulations 22 June 2022, 08:48:04 UTC
925d90d [RESULTS] 2-5-10nA 22 June 2022, 07:54:31 UTC
ec2e216 [ADD] new parameters file for custom connectivity 21 June 2022, 15:32:38 UTC
42a89a9 [FIX] changed rhythm to cosine 21 June 2022, 15:31:04 UTC
08c1833 [FIX] this creates accurate figures w/labels 21 June 2022, 15:30:04 UTC
bddbb13 [FIX] fixed plot_fig2_all() function call 20 June 2022, 22:28:50 UTC
63aefa2 [FIX] Added monitors for average Vm per area per group 16 June 2022, 13:56:17 UTC
de61b93 Minor code fixes 15 June 2022, 17:59:05 UTC
cf19072 Renamed file 15 June 2022, 15:44:17 UTC
a59e5b3 [FIX] tight layout is now used in the outer grid 15 June 2022, 15:29:07 UTC
d4756d1 [FIX] fixed rhythm (now cosine) and PRC (now -sin(Theta + offset)) 15 June 2022, 08:19:32 UTC
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