https://github.com/delalamo/af2_conformations

sort by:
Revision Author Date Message Commit Date
d60db86 Update predict.py 17 February 2022, 16:16:20 UTC
714006d Fixing runtime error in colab Error was: "module 'jaxlib.xla_extension' has no attribute 'PmapFunction'" Solution: Setting dm-haiku to version 0.0.5 15 February 2022, 13:33:36 UTC
1f3a7aa Update README.md 04 February 2022, 09:40:39 UTC
bcfe3ae Update README.md 04 February 2022, 09:39:17 UTC
48e96a5 Update README.md 04 February 2022, 09:38:25 UTC
a1642c8 Updating with changes to manuscript 04 February 2022, 09:36:51 UTC
729e357 Beautifying 30 January 2022, 23:44:22 UTC
9d2268d Adding equation for pLDDT-to-Bfactor conversion 13 January 2022, 07:22:14 UTC
992f37f Returning result 11 January 2022, 11:42:04 UTC
b3f9a3c Second typo 11 January 2022, 11:35:39 UTC
339cf88 Fixing typo 11 January 2022, 11:32:00 UTC
9c2a946 Adding output for predict() 11 January 2022, 11:27:43 UTC
e2e4fe6 Discussion on MSA mutation added to README 21 December 2021, 08:44:03 UTC
b20dd06 Update mutate_msa.ipynb 17 December 2021, 10:39:17 UTC
704bfac Adding "mutate_msa" notebook and making slight modifications to other notebooks. 17 December 2021, 10:37:45 UTC
f55116d Adding citation and updating README 15 December 2021, 06:05:44 UTC
7a2e280 Update predict.py 11 December 2021, 10:29:23 UTC
9009682 Update util.py 03 December 2021, 17:57:53 UTC
6d80959 Adding function to introduce MSA-wide mutations (for alanine mutagenesis) 03 December 2021, 15:47:24 UTC
2fa1d4b Update README.md 01 December 2021, 13:13:42 UTC
745d9e5 Merge branch 'main' of https://github.com/delalamo/af2_conformations into main 01 December 2021, 13:09:02 UTC
57aa4d5 Updating to use the refactored code in AlphaFold v2.1.1 01 December 2021, 13:08:27 UTC
9cbe3cb Update README.md 01 December 2021, 07:25:36 UTC
34a9021 Update README.md 30 November 2021, 09:01:17 UTC
6dc1a57 Update README.md 30 November 2021, 08:56:56 UTC
4a01500 Merge pull request #1 from davidesala/analyses Analyses 25 November 2021, 21:55:42 UTC
e8a9fdd scripts for analyses added and readme updated 25 November 2021, 14:51:39 UTC
0ce3266 scripts for analyses added 25 November 2021, 14:46:21 UTC
2127819 Update README.md 23 November 2021, 14:01:32 UTC
c2f859c Update mmseqs2.py 23 November 2021, 05:32:48 UTC
3e5c100 Update README.md 23 November 2021, 05:28:49 UTC
fd9cbe7 Updating link on colab badge 22 November 2021, 16:29:53 UTC
e21e0e0 Updating notebook (trying again) 22 November 2021, 16:27:35 UTC
17a1b97 Fixing typos in README 22 November 2021, 16:11:39 UTC
0fd5e0e Update README.md 22 November 2021, 15:53:18 UTC
967dd14 Modifying README to use header 22 November 2021, 15:33:03 UTC
9e247c3 Adding header image 22 November 2021, 15:31:52 UTC
0f19690 Initial commit without notebook. Verifying that scripts work before committing notebook. 22 November 2021, 15:10:34 UTC
1219656 Initial commit 22 November 2021, 15:03:04 UTC
back to top