| adf29e8 | vejnar | 19 April 2023, 15:50:13 UTC | Add --suffix to extract command | 19 April 2023, 15:50:13 UTC |
| 6477465 | vejnar | 19 April 2023, 15:49:26 UTC | Make reporting generic for steps with features | 19 April 2023, 15:49:26 UTC |
| d822eda | vejnar | 11 April 2023, 22:17:55 UTC | Add minimap2 | 11 April 2023, 22:17:55 UTC |
| a3f7096 | vejnar | 11 April 2023, 22:15:53 UTC | Implement outputting both compressed SAM and BAM | 11 April 2023, 22:15:53 UTC |
| d8359a1 | vejnar | 11 April 2023, 21:37:13 UTC | Remove bowtie2 exe from samtools cmd | 11 April 2023, 21:37:13 UTC |
| 153f161 | vejnar | 10 April 2023, 19:29:39 UTC | Replace get_illumina_fastq_info by get_fastq_info func | 10 April 2023, 19:29:39 UTC |
| 5519892 | vejnar | 05 April 2023, 16:19:02 UTC | Add samtools_sort step | 05 April 2023, 16:19:02 UTC |
| 6a60a87 | vejnar | 05 April 2023, 16:18:14 UTC | Formatting code | 05 April 2023, 16:18:14 UTC |
| da87fc9 | vejnar | 05 April 2023, 02:24:21 UTC | Add user-defined step function | 05 April 2023, 02:24:21 UTC |
| cec4282 | vejnar | 05 April 2023, 00:50:01 UTC | Add get_first_key func to utils | 05 April 2023, 00:50:01 UTC |
| c502eb9 | vejnar | 14 March 2023, 17:19:25 UTC | Add extract command | 14 March 2023, 17:19:25 UTC |
| 582dc62 | vejnar | 09 March 2023, 22:22:14 UTC | Add infos and path_output options to generate cmd | 09 March 2023, 22:22:14 UTC |
| 2a7bf8e | vejnar | 09 March 2023, 20:56:59 UTC | Add profile output to GeneAbacus/counting step | 09 March 2023, 20:56:59 UTC |
| 550bb21 | vejnar | 09 March 2023, 20:53:10 UTC | Check argv length in subcommands | 09 March 2023, 20:53:10 UTC |
| fc480e3 | vejnar | 09 March 2023, 20:48:35 UTC | Replace wigToBigWig by bg2bw | 09 March 2023, 20:48:35 UTC |
| 9896ba6 | vejnar | 03 March 2023, 16:00:38 UTC | Log to stdout until output dir available | 03 March 2023, 16:00:38 UTC |
| 2a48700 | vejnar | 02 March 2023, 03:42:03 UTC | Switch to single year copyright | 02 March 2023, 03:42:03 UTC |
| a4f2162 | vejnar | 23 November 2022, 19:48:49 UTC | Add demultiplex command | 23 November 2022, 19:48:49 UTC |
| 56493a6 | vejnar | 21 November 2022, 22:44:14 UTC | Add --no_count option | 21 November 2022, 22:44:14 UTC |
| 7a888d6 | vejnar | 21 November 2022, 20:04:31 UTC | Replace insert by numpy.vstack to avoid fragmented DataFrame | 21 November 2022, 20:04:31 UTC |
| d99194c | vejnar | 18 November 2022, 23:17:40 UTC | Add Zstandard for FON in merge-count | 18 November 2022, 23:17:40 UTC |
| 4040144 | vejnar | 20 October 2022, 21:02:41 UTC | Add profile command | 20 October 2022, 21:02:41 UTC |
| a05ddd8 | vejnar | 29 September 2022, 16:00:36 UTC | Update badge | 29 September 2022, 16:00:36 UTC |
| 851d45b | vejnar | 29 September 2022, 15:17:25 UTC | Update dep | 29 September 2022, 15:17:25 UTC |
| f093dd7 | vejnar | 29 September 2022, 14:58:01 UTC | Lower case for PyPI | 29 September 2022, 14:58:01 UTC |
| bc03eab | vejnar | 29 September 2022, 12:04:21 UTC | Update README | 29 September 2022, 12:04:21 UTC |
| adeb065 | vejnar | 29 September 2022, 11:53:26 UTC | Initial commit | 29 September 2022, 11:53:26 UTC |
