swh:1:snp:d115724179d0d93efabb20d76e28c3e1cb793f19
Tip revision: dceb57bf3c337b4fc93ace6c4b35764e7fe00909 authored by thwbecker on 05 January 2021, 20:19:50 UTC
Better log file output.
Better log file output.
Tip revision: dceb57b
Full_read_input_from_files.c
/*
*~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
*
*<LicenseText>
*
* CitcomS by Louis Moresi, Shijie Zhong, Lijie Han, Eh Tan,
* Clint Conrad, Michael Gurnis, and Eun-seo Choi.
* Copyright (C) 1994-2005, California Institute of Technology.
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
*
*</LicenseText>
*
*~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
*/
#include <math.h>
#include <sys/types.h>
#include "element_definitions.h"
#include "global_defs.h"
#ifdef USE_GGRD
#include "ggrd_handling.h"
#endif
/*=======================================================================
Calculate ages (MY) for opening input files -> material, ages, velocities
Open these files, read in results, and average if necessary
=========================================================================*/
void full_read_input_files_for_timesteps(E,action,output)
struct All_variables *E;
int action, output;
{
float find_age_in_MY();
FILE *fp1, *fp2;
float age, newage1, newage2;
char output_file1[255],output_file2[255];
float *TB1, *TB2, *VB1[4],*VB2[4], inputage1, inputage2;
int nox,noz,noy,nnn,nox1,noz1,noy1;
int i,ii,ll,m,mm,j,k,n,nodeg,nodel,node,cap;
int intage, pos_age;
int nodea;
int nn,el;
const int dims=E->mesh.nsd;
int elx,ely,elz,elg,emax;
float *VIP1,*VIP2;
int *LL1, *LL2;
int llayer;
int layers();
nox=E->mesh.nox;
noy=E->mesh.noy;
noz=E->mesh.noz;
nox1=E->lmesh.nox;
noz1=E->lmesh.noz;
noy1=E->lmesh.noy;
elx=E->lmesh.elx;
elz=E->lmesh.elz;
ely=E->lmesh.ely;
emax=E->mesh.elx*E->mesh.elz*E->mesh.ely;
age=find_age_in_MY(E);
if (age < 0.0) { /* age is negative -> use age=0 for input files */
intage = 0;
newage2 = newage1 = 0.0;
pos_age = 0;
}
else {
intage = age;
newage1 = 1.0*intage;
newage2 = 1.0*intage + 1.0;
pos_age = 1;
}
for (m=1;m<=E->sphere.caps_per_proc;m++) {
cap = E->sphere.capid[m] - 1; /* capid: 1-12 */
switch (action) { /* set up files to open */
case 1: /* read velocity boundary conditions */
#ifdef USE_GGRD
if(!E->control.ggrd.vtop_control){
#endif
sprintf(output_file1,"%s%0.0f.%d",E->control.velocity_boundary_file,newage1,cap);
sprintf(output_file2,"%s%0.0f.%d",E->control.velocity_boundary_file,newage2,cap);
fp1=fopen(output_file1,"r");
if (fp1 == NULL) {
fprintf(E->fp,"(Problem_related #4) Cannot open %s\n",output_file1);
exit(8);
}
if (pos_age) {
fp2=fopen(output_file2,"r");
if (fp2 == NULL) {
fprintf(E->fp,"(Problem_related #5) Cannot open %s\n",output_file2);
exit(8);
}
}
if((E->parallel.me==0) && (output==1)) {
fprintf(E->fp,"Velocity: Starting Age = %g, Elapsed time = %g, Current Age = %g\n",E->control.start_age,E->monitor.elapsed_time,age);
fprintf(E->fp,"Velocity: File1 = %s\n",output_file1);
if (pos_age)
fprintf(E->fp,"Velocity: File2 = %s\n",output_file2);
else
fprintf(E->fp,"Velocity: File2 = No file inputted (negative age)\n");
}
#ifdef USE_GGRD
}
#endif
break;
case 2: /* read ages for lithosphere temperature assimilation */
#ifdef USE_GGRD
if(!E->control.ggrd.age_control){
#endif
sprintf(output_file1,"%s%0.0f.%d",E->control.lith_age_file,newage1,cap);
sprintf(output_file2,"%s%0.0f.%d",E->control.lith_age_file,newage2,cap);
fp1=fopen(output_file1,"r");
if (fp1 == NULL) {
fprintf(E->fp,"(Problem_related #6) Cannot open %s\n",output_file1);
exit(8);
}
if (pos_age) {
fp2=fopen(output_file2,"r");
if (fp2 == NULL) {
fprintf(E->fp,"(Problem_related #7) Cannot open %s\n",output_file2);
exit(8);
}
}
if((E->parallel.me==0) && (output==1)) {
fprintf(E->fp,"Age: Starting Age = %g, Elapsed time = %g, Current Age = %g\n",E->control.start_age,E->monitor.elapsed_time,age);
fprintf(E->fp,"Age: File1 = %s\n",output_file1);
if (pos_age)
fprintf(E->fp,"Age: File2 = %s\n",output_file2);
else
fprintf(E->fp,"Age: File2 = No file inputted (negative age)\n");
}
#ifdef USE_GGRD
}
#endif
break;
case 3: /* read element materials */
#ifdef USE_GGRD
if(E->control.ggrd.mat_control == 0){
#endif
sprintf(output_file1,"%s%0.0f.%d",E->control.mat_file,newage1,cap);
sprintf(output_file2,"%s%0.0f.%d",E->control.mat_file,newage2,cap);
fp1=fopen(output_file1,"r");
if (fp1 == NULL) {
fprintf(E->fp,"(Problem_related #8) Cannot open %s\n",output_file1);
exit(8);
}
if (pos_age) {
fp2=fopen(output_file2,"r");
if (fp2 == NULL) {
fprintf(E->fp,"(Problem_related #9) Cannot open %s\n",output_file2);
exit(8);
}
}
if((E->parallel.me==0) && (output==1)) {
fprintf(E->fp,"Mat: Starting Age = %g, Elapsed time = %g, Current Age = %g\n",E->control.start_age,E->monitor.elapsed_time,age);
fprintf(E->fp,"Mat: File1 = %s\n",output_file1);
if (pos_age)
fprintf(E->fp,"Mat: File2 = %s\n",output_file2);
else
fprintf(E->fp,"Mat: File2 = No file inputted (negative age)\n");
}
#ifdef USE_GGRD
}
#endif
break;
/* mode 4 is rayleigh control for GGRD, see below */
case 5: /* read temperature boundary conditions, top surface */
sprintf(output_file1,"%s%0.0f.%d",E->control.temperature_boundary_file,newage1,cap);
sprintf(output_file2,"%s%0.0f.%d",E->control.temperature_boundary_file,newage2,cap);
fp1=fopen(output_file1,"r");
if (fp1 == NULL) {
fprintf(E->fp,"(Problem_related #10) Cannot open %s\n",output_file1);
exit(8);
}
if (pos_age) {
fp2=fopen(output_file2,"r");
if (fp2 == NULL) {
fprintf(E->fp,"(Problem_related #11) Cannot open %s\n",output_file2);
exit(8);
}
}
if((E->parallel.me==0) && (output==1)) {
fprintf(E->fp,"Surface Temperature: Starting Age = %g, Elapsed time = %g, Current Age = %g\n",E->control.start_age,E->monitor.elapsed_time,age);
fprintf(E->fp,"Surface Temperature: File1 = %s\n",output_file1);
if (pos_age)
fprintf(E->fp,"Surface Temperature: File2 = %s\n",output_file2);
else
fprintf(E->fp,"Velocity: File2 = No file inputted (negative age)\n");
}
break;
} /* end switch */
switch (action) { /* Read the contents of files and average */
case 1: /* velocity boundary conditions */
#ifdef USE_GGRD
if(!E->control.ggrd.vtop_control){ /* grd control is called from boundary conditions subroutine */
#endif
nnn=nox*noy;
for(i=1;i<=dims;i++) {
VB1[i]=(float*) malloc ((nnn+1)*sizeof(float));
VB2[i]=(float*) malloc ((nnn+1)*sizeof(float));
}
for(i=1;i<=nnn;i++) {
if(fscanf(fp1,"%f %f",&(VB1[1][i]),&(VB1[2][i])) != 2) {
fprintf(stderr,"Error while reading file '%s'\n",output_file1);
exit(8);
}
VB1[1][i] *= E->data.timedir;
VB1[2][i] *= E->data.timedir;
if (pos_age) {
if(fscanf(fp2,"%f %f",&(VB2[1][i]),&(VB2[2][i])) != 2) {
fprintf(stderr,"Error while reading file '%s'\n",output_file2);
exit(8);
}
VB2[1][i] *= E->data.timedir;
VB2[2][i] *= E->data.timedir;
}
/* if( E->parallel.me ==0)
fprintf(stderr,"%d %f %f %f %f\n",i,VB1[1][i],VB1[2][i],VB2[1][i],VB2[2][i]); */
}
fclose(fp1);
if (pos_age) fclose(fp2);
if(E->parallel.me_loc[3]==E->parallel.nprocz-1 ) {
for(k=1;k<=noy1;k++)
for(i=1;i<=nox1;i++) {
nodeg = E->lmesh.nxs+i-1 + (E->lmesh.nys+k-2)*nox;
nodel = (k-1)*nox1*noz1 + (i-1)*noz1+noz1;
if (pos_age) { /* positive ages - we must interpolate */
E->sphere.cap[m].VB[1][nodel] = (VB1[1][nodeg] + (VB2[1][nodeg]-VB1[1][nodeg])/(newage2-newage1)*(age-newage1))*E->data.scalev;
E->sphere.cap[m].VB[2][nodel] = (VB1[2][nodeg] + (VB2[2][nodeg]-VB1[2][nodeg])/(newage2-newage1)*(age-newage1))*E->data.scalev;
E->sphere.cap[m].VB[3][nodel] = 0.0;
}
else { /* negative ages - don't do the interpolation */
E->sphere.cap[m].VB[1][nodel] = VB1[1][nodeg] * E->data.scalev;
E->sphere.cap[m].VB[2][nodel] = VB1[2][nodeg] * E->data.scalev;
E->sphere.cap[m].VB[3][nodel] = 0.0;
}
}
} /* end of E->parallel.me_loc[3]==E->parallel.nproczl-1 */
for(i=1;i<=dims;i++) {
free ((void *) VB1[i]);
free ((void *) VB2[i]);
}
#ifdef USE_GGRD
}
#endif
break;
case 2: /* ages for lithosphere temperature assimilation */
/* ggrd version handled with velocities */
for(i=1;i<=noy;i++)
for(j=1;j<=nox;j++) {
node=j+(i-1)*nox;
if(fscanf(fp1,"%f",&inputage1) != 1) {
fprintf(stderr,"Error while reading file '%s'\n",output_file1);
exit(8);
}
if (pos_age) { /* positive ages - we must interpolate */
if(fscanf(fp2,"%f",&inputage2) != 1) {
fprintf(stderr,"Error while reading file '%s'\n",output_file2);
exit(8);
}
E->age_t[node] = (inputage1 + (inputage2-inputage1)/(newage2-newage1)*(age-newage1))/E->data.scalet;
}
else { /* negative ages - don't do the interpolation */
E->age_t[node] = inputage1;
}
}
fclose(fp1);
if (pos_age) fclose(fp2);
break;
case 3: /* read element materials and Ray */
#ifdef USE_GGRD
if(E->control.ggrd.mat_control != 0){ /* use netcdf grids */
ggrd_read_mat_from_file(E, 1);
}else{
#endif
VIP1 = (float*) malloc ((emax+1)*sizeof(float));
VIP2 = (float*) malloc ((emax+1)*sizeof(float));
LL1 = (int*) malloc ((emax+1)*sizeof(int));
LL2 = (int*) malloc ((emax+1)*sizeof(int));
for(m=1;m<=E->sphere.caps_per_proc;m++)
for (el=1; el<=elx*ely*elz; el++) {
nodea = E->ien[m][el].node[2];
llayer = layers(E,m,nodea);
if (llayer) { /* for layers:1-lithosphere,2-upper, 3-trans, and 4-lower mantle */
E->mat[m][el] = llayer;
fprintf(stderr,"\nINSIDE llayer=%d",llayer);
}
}
for(i=1;i<=emax;i++) {
if(fscanf(fp1,"%d %d %f", &nn,&(LL1[i]),&(VIP1[i])) != 3) {
fprintf(stderr,"Error while reading file '%s'\n",output_file1);
exit(8);
}
if(fscanf(fp2,"%d %d %f", &nn,&(LL2[i]),&(VIP2[i])) != 3) {
fprintf(stderr,"Error while reading file '%s'\n",output_file2);
exit(8);
}
}
fclose(fp1);
fclose(fp2);
for (m=1;m<=E->sphere.caps_per_proc;m++) {
for (k=1;k<=ely;k++) {
for (i=1;i<=elx;i++) {
for (j=1;j<=elz;j++) {
el = j + (i-1)*E->lmesh.elz + (k-1)*E->lmesh.elz*E->lmesh.elx;
elg = E->lmesh.ezs+j + (E->lmesh.exs+i-1)*E->mesh.elz + (E->lmesh.eys+k-1)*E->mesh.elz*E->mesh.elx;
E->VIP[m][el] = VIP1[elg]+(VIP2[elg]-VIP1[elg])/(newage2-newage1)*(age-newage1);
/* E->mat[m][el] = LL1[elg]; */ /*get material numbers from radius internally */
} /* end for j */
} /* end for i */
} /* end for k */
} /* end for m */
free ((void *) VIP1);
free ((void *) VIP2);
free ((void *) LL1);
free ((void *) LL2);
#ifdef USE_GGRD
} /* end of branch if allowing for ggrd handling */
#endif
break;
case 4: /* material control */
#ifdef USE_GGRD
/* read laterally varying rayleigh number prefactor from
file */
if(E->control.ggrd.ray_control)
ggrd_read_ray_from_file(E, 1);
#else
myerror(E,"input_from_files: mode 4 only for GGRD");
#endif
break;
case 5: /* read temperature boundary conditions, top surface */
nnn=nox*noy;
TB1=(float*) malloc ((nnn+1)*sizeof(float));
TB2=(float*) malloc ((nnn+1)*sizeof(float));
for(i=1;i<=nnn;i++) {
if(fscanf(fp1,"%f",&(TB1[i])) != 1) {
fprintf(stderr,"Error while reading file '%s'\n",output_file1);
exit(8);
}
if (pos_age) {
if(fscanf(fp2,"%f",&(TB2[i])) != 1) {
fprintf(stderr,"Error while reading file '%s'\n",output_file2);
exit(8);
}
}
}
fclose(fp1);
if (pos_age) fclose(fp2);
if(E->parallel.me_loc[3]==E->parallel.nprocz-1 ) {
for(k=1;k<=noy1;k++)
for(i=1;i<=nox1;i++) {
nodeg = E->lmesh.nxs+i-1 + (E->lmesh.nys+k-2)*nox;
nodel = (k-1)*nox1*noz1 + (i-1)*noz1+noz1;
if (pos_age) { /* positive ages - we must interpolate */
E->sphere.cap[m].TB[1][nodel] = (TB1[nodeg] + (TB2[nodeg]-TB1[nodeg])/(newage2-newage1)*(age-newage1));
E->sphere.cap[m].TB[2][nodel] = (TB1[nodeg] + (TB2[nodeg]-TB1[nodeg])/(newage2-newage1)*(age-newage1));
E->sphere.cap[m].TB[3][nodel] = (TB1[nodeg] + (TB2[nodeg]-TB1[nodeg])/(newage2-newage1)*(age-newage1));
}
else { /* negative ages - don't do the interpolation */
E->sphere.cap[m].TB[1][nodel] = TB1[nodeg];
E->sphere.cap[m].TB[2][nodel] = TB1[nodeg];
E->sphere.cap[m].TB[3][nodel] = TB1[nodeg];
}
}
} /* end of E->parallel.me_loc[3]==E->parallel.nproczl-1 */
free ((void *) TB1);
free ((void *) TB2);
break;
} /* end switch */
} /* end for m */
fflush(E->fp);
return;
}