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https://github.com/jiwoncpark/baobab

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Revision Author Date Message Commit Date
2a9a1b3 Update README.rst Add DOI badge 28 January 2021, 17:53:11 UTC
575e21b Introduce Imager2 for simple images with just source and lens and no metadata output 02 January 2021, 11:59:12 UTC
74c2093 Publish v0.1.1 to pypi, remove modify_existing 28 December 2020, 07:18:38 UTC
749ecb5 Publish v0.1.1 to pypi 28 December 2020, 07:17:52 UTC
2a89f04 Fix conflicts in parser 16 November 2020, 20:59:02 UTC
81b7fdd Merge branch 'master' of https://github.com/jiwoncpark/baobab into master 12 November 2020, 12:26:36 UTC
437ac2a Exclude configs from coveralls 12 November 2020, 12:26:20 UTC
ff3bf14 Exclude configs from coveralls 12 November 2020, 12:25:37 UTC
afbab6b Ease image separation cut on default configs for HST and LSST 28 October 2020, 02:56:07 UTC
e84014f Merge branch 'issue/55' of https://github.com/jiwoncpark/baobab into issue/55 09 October 2020, 07:25:54 UTC
92ed733 Add utility function to extract lensed ps kwargs from metadata table, useful for forward modeling 09 October 2020, 07:25:38 UTC
b851747 Fix typo in generate script, error not err 09 October 2020, 07:25:12 UTC
cf09ab9 Fix typo, error not err 09 October 2020, 07:24:40 UTC
d63579e forgot a return statement 21 August 2020, 19:44:58 UTC
8757d7e frogot to add 'instantiate_PSF_kwargs' to all 21 August 2020, 19:15:38 UTC
8d9d56d broke psf into kwargs and psf model functions as is done in master 21 August 2020, 19:11:52 UTC
069fab5 get_noise_kwargs works 14 August 2020, 19:04:15 UTC
42e44fc Bring back try except 12 August 2020, 21:57:45 UTC
b6a37fa Update subprocess check_output to run without entrypoint 12 August 2020, 21:47:54 UTC
33170f3 Remove try except to show better traceback, can't reproduce test failure locally 12 August 2020, 21:33:28 UTC
6f10591 Try showing errors for a different config 12 August 2020, 21:23:07 UTC
8110de5 Do not leave out des_config when fixing destination_dir for tests 12 August 2020, 21:06:11 UTC
62b4644 Specify root of repo as destination_dir 12 August 2020, 21:04:57 UTC
b2bdf43 Try showing errors for the generate script, which I can't reproduce locally 12 August 2020, 20:56:40 UTC
82a558e Move sky brightness calculation module here from h0rton 12 August 2020, 20:28:15 UTC
9c2189b Rename eq to eqn following latest lenstronomy update 12 August 2020, 02:12:25 UTC
ece4a2e Override obs and camera kwargs if specified in the config 10 August 2020, 19:57:08 UTC
1ef0da0 Recognize 3D image shapes in HDF5 script 06 August 2020, 22:47:24 UTC
f2ffd70 Put in an empty placeholder test for a now much simplified PSF utils module 06 August 2020, 22:46:20 UTC
4457fb9 Clean up and test generate script 06 August 2020, 22:45:40 UTC
06a6995 Nest survey name, bandpass, and coadd_years in survey_info 06 August 2020, 22:45:04 UTC
35da9d2 Integrate ObservationConfig with BaobabConfig 06 August 2020, 21:23:26 UTC
28774cc Remove survey info method call to keep master green 05 August 2020, 23:19:26 UTC
48d3c97 Remove ObservationConfig import for now 05 August 2020, 18:03:52 UTC
3a146af Deepcopy the config dictionaries for safety 05 August 2020, 18:02:37 UTC
43ca8c0 Enable json extension for configs 05 August 2020, 09:35:39 UTC
5d3abc6 Do not install python-coveralls and coveralls to the same vm 05 August 2020, 09:35:21 UTC
b6331b6 Protect against deprecation 05 August 2020, 09:02:19 UTC
75ded5c Bring noise modules back to compliance, haven't tracked down what caused deviation 05 August 2020, 08:49:37 UTC
bfb005a Remove user flag from fastell4py install 04 August 2020, 23:40:36 UTC
f7411c7 Require jiwoncpark fork of lenstronomy, for now 04 August 2020, 23:17:54 UTC
573767d Require tensorflow and torch for tests 04 August 2020, 22:13:53 UTC
a92d4aa Stop tracking deleted psf fits files 04 August 2020, 22:12:45 UTC
cf877fa Enable errors in magnification 04 August 2020, 22:07:18 UTC
af26dde Fix merge conflict 04 August 2020, 22:05:51 UTC
82a1d73 Install fastell4py 04 August 2020, 22:04:48 UTC
537f521 Allow sampling from transformed kappa 04 August 2020, 22:03:37 UTC
8653386 Merge pull request #52 from jiwoncpark/issue/51 changed the code to seperate the psf kwargs from the psf models 03 August 2020, 18:55:01 UTC
b8c8163 fixed everything except test on ADU comparison in noise and issue with passing kwargs for lens equation to TDCosmography class in lenstronomy 03 August 2020, 18:45:12 UTC
09bc57f should have installed scikit-image 03 August 2020, 18:04:50 UTC
336f910 need skimage 03 August 2020, 17:55:14 UTC
35b7442 make some changes to travis.yaml file to see if we can get things working 03 August 2020, 17:38:50 UTC
d7afab9 added vectorized distributions for hierarchical inference 30 July 2020, 05:18:37 UTC
d0f1bc7 Check PSF 150 back in 04 July 2020, 05:04:11 UTC
0a8bb4c Enable sampling of reparameterized kappa 04 July 2020, 05:03:01 UTC
081a18d Merge remote-tracking branch 'origin/master' into issue/51 03 July 2020, 23:59:52 UTC
3fc8139 made the approximation for uniform have a constant slope as the test desires 03 July 2020, 00:52:11 UTC
9745ea5 as a bonus, made the uniform distribution function a numbda function 03 July 2020, 00:45:24 UTC
5911c6a Spell out fastell4py install 24 June 2020, 10:14:40 UTC
936e902 Add fastell4py to try to make Travis happy 24 June 2020, 09:53:34 UTC
59917da Init ImageModel to work in the no-AGN case 24 June 2020, 09:49:37 UTC
3056539 changed the code to seperate the psf kwargs from the psf models 19 June 2020, 01:54:21 UTC
239873b Fix magnification bug in which the unlensed image had the intrinsic amplitude of point sources, but lensed so the flux was overestimated by the factor of image number 12 June 2020, 03:22:24 UTC
cb347a5 Fix lens equation precision to 0.05 because 0.08 (current pixel size) yields erratic image number 12 June 2020, 01:09:56 UTC
fd335ee Restrict image number rejection to images with AGN (bug fix) 11 June 2020, 07:34:50 UTC
7604522 Define PSF and aperture kwargs in tdcosmo local dictionary (a hack) rather than passing them into KinematicsAPI's velocity_dispersion_analytical 11 June 2020, 07:21:52 UTC
1e5bb3e Update SPEMD to PEMD, following Lenstronomy update 11 June 2020, 07:02:24 UTC
c5acbb0 Remove unused kwargs in flux calculation methods 11 June 2020, 06:22:33 UTC
ef70d20 Fix typo in x_image, y_image key 11 June 2020, 06:20:58 UTC
e6b5c09 Have DiagonalCosmoCNNPrior export the image positions that were used to generate the time delays 11 June 2020, 06:20:42 UTC
fcbcd72 Do not pass in lens light kwargs, as it's not needed, and pass in ps kwargs 30 May 2020, 07:13:02 UTC
e8f395d Include AGN light in the unlensed image for magnification computation 30 May 2020, 07:12:03 UTC
48eb7d8 Fix typo in metadata keys to export 26 May 2020, 08:12:53 UTC
45d580c Render the unlensed source on a pixel grid for computing total magnification. If using the analytically integrated surface brightness, you need to multiply by the num_pix (bug fix) 25 May 2020, 06:30:08 UTC
7c70c9d Ensure numerical consistency between time delays and image positions 25 May 2020, 05:40:17 UTC
54686d0 Enable pure numpy noise generation 21 May 2020, 20:14:57 UTC
0664c7e Make velocity dispersion the latent variable for theta_E, gamma, q 21 May 2020, 20:13:37 UTC
022bae0 Switch to PEMD from SPEMD, per lenstronomy update 21 May 2020, 20:12:39 UTC
cf934e2 Remove fitting errors and add intrinsic errors 22 April 2020, 19:57:49 UTC
4d64949 Enable sampling of gamma from vel disp 22 April 2020, 19:51:54 UTC
12cf9e1 Modify default models for lens mass axis ratio and redshift offset 22 April 2020, 19:45:12 UTC
897c1a9 Switch to simpler error realization for gamma, from error propagation 15 April 2020, 18:55:40 UTC
5753f43 Enable option to NOT reject examples with unmatching time delay and image position lengths, for testing purposes 11 March 2020, 23:03:09 UTC
36081b3 Fix bug in PSF rotation (indent error) 10 March 2020, 18:42:34 UTC
be25f97 Improve image finding precision for generate_image_simple (for DC2 verification) 04 March 2020, 02:34:40 UTC
1d6ed69 Make FindBrightImage even more numerically precise 28 February 2020, 01:58:05 UTC
48ca401 Add missing asterisk in precision limit (bug) 27 February 2020, 01:25:58 UTC
302bf07 Update precision config for findBrightImage to match the default for td_cosmography.time_delays so that the number of images, their positions, and the number of time delays are consistent 27 February 2020, 01:25:07 UTC
960ddbd Enable a simpler way of generating the images that takes in amp rather than magnitude and doesn't calculate magnification 09 February 2020, 08:10:12 UTC
32e3748 Enable background_noise calculation in torch without entering unnecessary variables 09 February 2020, 08:09:44 UTC
417c58e Merge pull request #47 from jiwoncpark/issue/46 Changed the variable in tf noise model causing the code to crash 08 February 2020, 01:47:39 UTC
7f4fdec changed variable name 08 February 2020, 00:16:08 UTC
7941787 Merge pull request #45 from jiwoncpark/issue/44 Fixed bug in lognorm. 07 February 2020, 21:34:21 UTC
a975714 fixed bug in lognorm 07 February 2020, 21:27:35 UTC
5cc1193 Follow the new import path for noise models 07 February 2020, 02:37:58 UTC
128054c Update baobab configs to not specify noise-related parameters and give hyperparameters for FlatLCDM 07 February 2020, 02:37:37 UTC
433fc3d Import FlatLambdaCDM (bug) 07 February 2020, 02:30:27 UTC
a249eb7 Hardcode noiseless image generation 07 February 2020, 02:28:49 UTC
becebc2 Simplify cosmology to flat LCDM for consistency with H0rton 07 February 2020, 02:27:56 UTC
853a753 Merge branch 'master' of https://github.com/jiwoncpark/baobab 06 February 2020, 23:55:12 UTC
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