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https://github.com/jiwoncpark/baobab
24 June 2021, 10:47:17 UTC
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Revision Author Date Message Commit Date
2a9a1b3 Ji Won Park 28 January 2021, 17:53:11 UTC Update README.rst Add DOI badge 28 January 2021, 17:53:11 UTC
575e21b jiwoncpark 02 January 2021, 11:59:12 UTC Introduce Imager2 for simple images with just source and lens and no metadata output 02 January 2021, 11:59:12 UTC
74c2093 jiwoncpark 28 December 2020, 07:18:38 UTC Publish v0.1.1 to pypi, remove modify_existing 28 December 2020, 07:18:38 UTC
749ecb5 jiwoncpark 28 December 2020, 07:17:52 UTC Publish v0.1.1 to pypi 28 December 2020, 07:17:52 UTC
2a89f04 jiwoncpark 16 November 2020, 20:59:02 UTC Fix conflicts in parser 16 November 2020, 20:59:02 UTC
81b7fdd jiwoncpark 12 November 2020, 12:26:36 UTC Merge branch 'master' of https://github.com/jiwoncpark/baobab into master 12 November 2020, 12:26:36 UTC
437ac2a jiwoncpark 12 November 2020, 12:26:20 UTC Exclude configs from coveralls 12 November 2020, 12:26:20 UTC
ff3bf14 jiwoncpark 12 November 2020, 12:25:37 UTC Exclude configs from coveralls 12 November 2020, 12:25:37 UTC
afbab6b jiwoncpark 28 October 2020, 02:56:07 UTC Ease image separation cut on default configs for HST and LSST 28 October 2020, 02:56:07 UTC
e84014f jiwoncpark 09 October 2020, 07:25:54 UTC Merge branch 'issue/55' of https://github.com/jiwoncpark/baobab into issue/55 09 October 2020, 07:25:54 UTC
92ed733 jiwoncpark 09 October 2020, 07:25:38 UTC Add utility function to extract lensed ps kwargs from metadata table, useful for forward modeling 09 October 2020, 07:25:38 UTC
b851747 jiwoncpark 09 October 2020, 07:25:12 UTC Fix typo in generate script, error not err 09 October 2020, 07:25:12 UTC
cf09ab9 jiwoncpark 09 October 2020, 07:24:40 UTC Fix typo, error not err 09 October 2020, 07:24:40 UTC
d63579e Sebastian Wagner-Carena 21 August 2020, 19:44:58 UTC forgot a return statement 21 August 2020, 19:44:58 UTC
8757d7e Sebastian Wagner-Carena 21 August 2020, 19:15:38 UTC frogot to add 'instantiate_PSF_kwargs' to all 21 August 2020, 19:15:38 UTC
8d9d56d Sebastian Wagner-Carena 21 August 2020, 19:11:52 UTC broke psf into kwargs and psf model functions as is done in master 21 August 2020, 19:11:52 UTC
069fab5 Sebastian Wagner-Carena 14 August 2020, 19:04:15 UTC get_noise_kwargs works 14 August 2020, 19:04:15 UTC
42e44fc jiwoncpark 12 August 2020, 21:57:45 UTC Bring back try except 12 August 2020, 21:57:45 UTC
b6a37fa jiwoncpark 12 August 2020, 21:47:54 UTC Update subprocess check_output to run without entrypoint 12 August 2020, 21:47:54 UTC
33170f3 jiwoncpark 12 August 2020, 21:33:28 UTC Remove try except to show better traceback, can't reproduce test failure locally 12 August 2020, 21:33:28 UTC
6f10591 jiwoncpark 12 August 2020, 21:23:07 UTC Try showing errors for a different config 12 August 2020, 21:23:07 UTC
8110de5 jiwoncpark 12 August 2020, 21:06:11 UTC Do not leave out des_config when fixing destination_dir for tests 12 August 2020, 21:06:11 UTC
62b4644 jiwoncpark 12 August 2020, 21:04:57 UTC Specify root of repo as destination_dir 12 August 2020, 21:04:57 UTC
b2bdf43 jiwoncpark 12 August 2020, 20:56:40 UTC Try showing errors for the generate script, which I can't reproduce locally 12 August 2020, 20:56:40 UTC
82a558e jiwoncpark 12 August 2020, 20:28:15 UTC Move sky brightness calculation module here from h0rton 12 August 2020, 20:28:15 UTC
9c2189b jiwoncpark 12 August 2020, 02:12:25 UTC Rename eq to eqn following latest lenstronomy update 12 August 2020, 02:12:25 UTC
ece4a2e jiwoncpark 10 August 2020, 19:57:08 UTC Override obs and camera kwargs if specified in the config 10 August 2020, 19:57:08 UTC
1ef0da0 jiwoncpark 06 August 2020, 22:47:24 UTC Recognize 3D image shapes in HDF5 script 06 August 2020, 22:47:24 UTC
f2ffd70 jiwoncpark 06 August 2020, 22:46:20 UTC Put in an empty placeholder test for a now much simplified PSF utils module 06 August 2020, 22:46:20 UTC
4457fb9 jiwoncpark 06 August 2020, 22:45:40 UTC Clean up and test generate script 06 August 2020, 22:45:40 UTC
06a6995 jiwoncpark 06 August 2020, 22:45:04 UTC Nest survey name, bandpass, and coadd_years in survey_info 06 August 2020, 22:45:04 UTC
35da9d2 jiwoncpark 06 August 2020, 21:23:26 UTC Integrate ObservationConfig with BaobabConfig 06 August 2020, 21:23:26 UTC
28774cc Ji Won Park 05 August 2020, 23:19:26 UTC Remove survey info method call to keep master green 05 August 2020, 23:19:26 UTC
48d3c97 jiwoncpark 05 August 2020, 18:03:52 UTC Remove ObservationConfig import for now 05 August 2020, 18:03:52 UTC
3a146af jiwoncpark 05 August 2020, 18:02:37 UTC Deepcopy the config dictionaries for safety 05 August 2020, 18:02:37 UTC
43ca8c0 jiwoncpark 05 August 2020, 09:35:39 UTC Enable json extension for configs 05 August 2020, 09:35:39 UTC
5d3abc6 jiwoncpark 05 August 2020, 09:35:21 UTC Do not install python-coveralls and coveralls to the same vm 05 August 2020, 09:35:21 UTC
b6331b6 jiwoncpark 05 August 2020, 09:02:19 UTC Protect against deprecation 05 August 2020, 09:02:19 UTC
75ded5c jiwoncpark 05 August 2020, 08:49:37 UTC Bring noise modules back to compliance, haven't tracked down what caused deviation 05 August 2020, 08:49:37 UTC
bfb005a jiwoncpark 04 August 2020, 23:40:36 UTC Remove user flag from fastell4py install 04 August 2020, 23:40:36 UTC
f7411c7 jiwoncpark 04 August 2020, 23:17:54 UTC Require jiwoncpark fork of lenstronomy, for now 04 August 2020, 23:17:54 UTC
573767d jiwoncpark 04 August 2020, 22:13:53 UTC Require tensorflow and torch for tests 04 August 2020, 22:13:53 UTC
a92d4aa jiwoncpark 04 August 2020, 22:12:45 UTC Stop tracking deleted psf fits files 04 August 2020, 22:12:45 UTC
cf877fa jiwoncpark 04 August 2020, 22:07:18 UTC Enable errors in magnification 04 August 2020, 22:07:18 UTC
af26dde jiwoncpark 04 August 2020, 22:05:51 UTC Fix merge conflict 04 August 2020, 22:05:51 UTC
82a1d73 jiwoncpark 04 August 2020, 22:04:48 UTC Install fastell4py 04 August 2020, 22:04:48 UTC
537f521 jiwoncpark 04 August 2020, 22:03:37 UTC Allow sampling from transformed kappa 04 August 2020, 22:03:37 UTC
8653386 Ji Won Park 03 August 2020, 18:55:01 UTC Merge pull request #52 from jiwoncpark/issue/51 changed the code to seperate the psf kwargs from the psf models 03 August 2020, 18:55:01 UTC
b8c8163 Sebastian Wagner-Carena 03 August 2020, 18:45:12 UTC fixed everything except test on ADU comparison in noise and issue with passing kwargs for lens equation to TDCosmography class in lenstronomy 03 August 2020, 18:45:12 UTC
09bc57f Sebastian Wagner-Carena 03 August 2020, 18:04:50 UTC should have installed scikit-image 03 August 2020, 18:04:50 UTC
336f910 Sebastian Wagner-Carena 03 August 2020, 17:55:14 UTC need skimage 03 August 2020, 17:55:14 UTC
35b7442 Sebastian Wagner-Carena 03 August 2020, 17:38:50 UTC make some changes to travis.yaml file to see if we can get things working 03 August 2020, 17:38:50 UTC
d7afab9 Sebastian Wagner-Carena 30 July 2020, 05:18:37 UTC added vectorized distributions for hierarchical inference 30 July 2020, 05:18:37 UTC
d0f1bc7 jiwoncpark 04 July 2020, 05:04:11 UTC Check PSF 150 back in 04 July 2020, 05:04:11 UTC
0a8bb4c jiwoncpark 04 July 2020, 05:03:01 UTC Enable sampling of reparameterized kappa 04 July 2020, 05:03:01 UTC
081a18d Sebastian Wagner-Carena 03 July 2020, 23:59:52 UTC Merge remote-tracking branch 'origin/master' into issue/51 03 July 2020, 23:59:52 UTC
3fc8139 Sebastian Wagner-Carena 03 July 2020, 00:52:11 UTC made the approximation for uniform have a constant slope as the test desires 03 July 2020, 00:52:11 UTC
9745ea5 Sebastian Wagner-Carena 03 July 2020, 00:45:24 UTC as a bonus, made the uniform distribution function a numbda function 03 July 2020, 00:45:24 UTC
5911c6a jiwoncpark 24 June 2020, 10:14:40 UTC Spell out fastell4py install 24 June 2020, 10:14:40 UTC
936e902 jiwoncpark 24 June 2020, 09:53:34 UTC Add fastell4py to try to make Travis happy 24 June 2020, 09:53:34 UTC
59917da jiwoncpark 24 June 2020, 09:49:37 UTC Init ImageModel to work in the no-AGN case 24 June 2020, 09:49:37 UTC
3056539 Sebastian Wagner-Carena 19 June 2020, 01:54:21 UTC changed the code to seperate the psf kwargs from the psf models 19 June 2020, 01:54:21 UTC
239873b jiwoncpark 12 June 2020, 03:22:24 UTC Fix magnification bug in which the unlensed image had the intrinsic amplitude of point sources, but lensed so the flux was overestimated by the factor of image number 12 June 2020, 03:22:24 UTC
cb347a5 jiwoncpark 12 June 2020, 01:09:56 UTC Fix lens equation precision to 0.05 because 0.08 (current pixel size) yields erratic image number 12 June 2020, 01:09:56 UTC
fd335ee jiwoncpark 11 June 2020, 07:34:50 UTC Restrict image number rejection to images with AGN (bug fix) 11 June 2020, 07:34:50 UTC
7604522 jiwoncpark 11 June 2020, 07:21:52 UTC Define PSF and aperture kwargs in tdcosmo local dictionary (a hack) rather than passing them into KinematicsAPI's velocity_dispersion_analytical 11 June 2020, 07:21:52 UTC
1e5bb3e jiwoncpark 11 June 2020, 07:02:24 UTC Update SPEMD to PEMD, following Lenstronomy update 11 June 2020, 07:02:24 UTC
c5acbb0 jiwoncpark 11 June 2020, 06:22:33 UTC Remove unused kwargs in flux calculation methods 11 June 2020, 06:22:33 UTC
ef70d20 jiwoncpark 11 June 2020, 06:20:58 UTC Fix typo in x_image, y_image key 11 June 2020, 06:20:58 UTC
e6b5c09 jiwoncpark 11 June 2020, 06:20:42 UTC Have DiagonalCosmoCNNPrior export the image positions that were used to generate the time delays 11 June 2020, 06:20:42 UTC
fcbcd72 jiwoncpark 30 May 2020, 07:13:02 UTC Do not pass in lens light kwargs, as it's not needed, and pass in ps kwargs 30 May 2020, 07:13:02 UTC
e8f395d jiwoncpark 30 May 2020, 07:12:03 UTC Include AGN light in the unlensed image for magnification computation 30 May 2020, 07:12:03 UTC
48eb7d8 jiwoncpark 26 May 2020, 08:12:53 UTC Fix typo in metadata keys to export 26 May 2020, 08:12:53 UTC
45d580c jiwoncpark 25 May 2020, 06:30:08 UTC Render the unlensed source on a pixel grid for computing total magnification. If using the analytically integrated surface brightness, you need to multiply by the num_pix (bug fix) 25 May 2020, 06:30:08 UTC
7c70c9d jiwoncpark 25 May 2020, 05:40:17 UTC Ensure numerical consistency between time delays and image positions 25 May 2020, 05:40:17 UTC
54686d0 jiwoncpark 21 May 2020, 20:14:57 UTC Enable pure numpy noise generation 21 May 2020, 20:14:57 UTC
0664c7e jiwoncpark 21 May 2020, 20:13:37 UTC Make velocity dispersion the latent variable for theta_E, gamma, q 21 May 2020, 20:13:37 UTC
022bae0 jiwoncpark 21 May 2020, 20:12:39 UTC Switch to PEMD from SPEMD, per lenstronomy update 21 May 2020, 20:12:39 UTC
cf934e2 jiwoncpark 22 April 2020, 19:57:49 UTC Remove fitting errors and add intrinsic errors 22 April 2020, 19:57:49 UTC
4d64949 jiwoncpark 22 April 2020, 19:51:54 UTC Enable sampling of gamma from vel disp 22 April 2020, 19:51:54 UTC
12cf9e1 jiwoncpark 22 April 2020, 19:45:12 UTC Modify default models for lens mass axis ratio and redshift offset 22 April 2020, 19:45:12 UTC
897c1a9 jiwoncpark 15 April 2020, 18:55:40 UTC Switch to simpler error realization for gamma, from error propagation 15 April 2020, 18:55:40 UTC
5753f43 jiwoncpark 11 March 2020, 23:03:09 UTC Enable option to NOT reject examples with unmatching time delay and image position lengths, for testing purposes 11 March 2020, 23:03:09 UTC
36081b3 jiwoncpark 10 March 2020, 18:42:34 UTC Fix bug in PSF rotation (indent error) 10 March 2020, 18:42:34 UTC
be25f97 jiwoncpark 04 March 2020, 02:34:40 UTC Improve image finding precision for generate_image_simple (for DC2 verification) 04 March 2020, 02:34:40 UTC
1d6ed69 jiwoncpark 28 February 2020, 01:58:05 UTC Make FindBrightImage even more numerically precise 28 February 2020, 01:58:05 UTC
48ca401 jiwoncpark 27 February 2020, 01:25:58 UTC Add missing asterisk in precision limit (bug) 27 February 2020, 01:25:58 UTC
302bf07 jiwoncpark 27 February 2020, 01:25:07 UTC Update precision config for findBrightImage to match the default for td_cosmography.time_delays so that the number of images, their positions, and the number of time delays are consistent 27 February 2020, 01:25:07 UTC
960ddbd jiwoncpark 09 February 2020, 08:10:12 UTC Enable a simpler way of generating the images that takes in amp rather than magnitude and doesn't calculate magnification 09 February 2020, 08:10:12 UTC
32e3748 jiwoncpark 09 February 2020, 08:09:44 UTC Enable background_noise calculation in torch without entering unnecessary variables 09 February 2020, 08:09:44 UTC
417c58e swagnercarena 08 February 2020, 01:47:39 UTC Merge pull request #47 from jiwoncpark/issue/46 Changed the variable in tf noise model causing the code to crash 08 February 2020, 01:47:39 UTC
7f4fdec Sebastian Wagner-Carena 08 February 2020, 00:16:08 UTC changed variable name 08 February 2020, 00:16:08 UTC
7941787 Ji Won Park 07 February 2020, 21:34:21 UTC Merge pull request #45 from jiwoncpark/issue/44 Fixed bug in lognorm. 07 February 2020, 21:34:21 UTC
a975714 Sebastian Wagner-Carena 07 February 2020, 21:27:35 UTC fixed bug in lognorm 07 February 2020, 21:27:35 UTC
5cc1193 jiwoncpark 07 February 2020, 02:37:58 UTC Follow the new import path for noise models 07 February 2020, 02:37:58 UTC
128054c jiwoncpark 07 February 2020, 02:37:37 UTC Update baobab configs to not specify noise-related parameters and give hyperparameters for FlatLCDM 07 February 2020, 02:37:37 UTC
433fc3d jiwoncpark 07 February 2020, 02:30:27 UTC Import FlatLambdaCDM (bug) 07 February 2020, 02:30:27 UTC
a249eb7 jiwoncpark 07 February 2020, 02:28:49 UTC Hardcode noiseless image generation 07 February 2020, 02:28:49 UTC
becebc2 jiwoncpark 07 February 2020, 02:27:56 UTC Simplify cosmology to flat LCDM for consistency with H0rton 07 February 2020, 02:27:56 UTC
853a753 jiwoncpark 06 February 2020, 23:55:12 UTC Merge branch 'master' of https://github.com/jiwoncpark/baobab 06 February 2020, 23:55:12 UTC
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