8420fef | Mitzi Morris | 05 April 2017, 02:52:49 UTC | header fix | 05 April 2017, 02:52:49 UTC |
dc3dae2 | Mitzi Morris | 05 April 2017, 00:36:49 UTC | sampler unit tests relax checking; test makefile cleanup | 05 April 2017, 00:36:49 UTC |
1b9ad48 | Mitzi Morris | 04 April 2017, 23:45:03 UTC | remove spurious unit tests | 04 April 2017, 23:45:03 UTC |
01bfc54 | Mitzi Morris | 04 April 2017, 22:42:23 UTC | relax err margin for static hmc mass matrix test; header fix | 04 April 2017, 22:42:23 UTC |
5341fbb | Mitzi Morris | 04 April 2017, 20:47:19 UTC | unit test helper function uses atof, stod problematic with c++11 compilers | 04 April 2017, 20:47:19 UTC |
58b0c84 | Mitzi Morris | 04 April 2017, 20:14:51 UTC | header fix | 04 April 2017, 20:14:51 UTC |
167c006 | Mitzi Morris | 04 April 2017, 18:03:27 UTC | added dependencies on compiled model to test makefile | 04 April 2017, 18:03:27 UTC |
9f4c383 | Mitzi Morris | 03 April 2017, 20:44:20 UTC | deletions | 03 April 2017, 20:44:20 UTC |
128b809 | Mitzi Morris | 03 April 2017, 20:01:25 UTC | cpplint fix | 03 April 2017, 20:01:25 UTC |
08b9387 | Mitzi Morris | 03 April 2017, 19:59:27 UTC | header include create, read, validate mass_matrix functions in services/util; unit tests for utils | 03 April 2017, 19:59:27 UTC |
8d178e0 | Mitzi Morris | 03 April 2017, 00:38:45 UTC | added validate mass matrix utils plus unit test; passes cpplint and doxygen | 03 April 2017, 00:38:45 UTC |
d42763a | Mitzi Morris | 02 April 2017, 21:51:21 UTC | helper functions to create initial mass matrix for samplers | 02 April 2017, 21:51:21 UTC |
2978969 | Mitzi Morris | 02 April 2017, 21:50:32 UTC | unit tests for static or hmc x dense or diag samplers, with/without adaptation | 02 April 2017, 21:50:32 UTC |
36dca8e | Mitzi Morris | 02 April 2017, 21:48:02 UTC | unit tests for static or hmc x dense or diag samplers, with/without adaptation | 02 April 2017, 21:48:02 UTC |
ff1ae42 | Mitzi Morris | 01 April 2017, 17:28:09 UTC | checkpointing | 01 April 2017, 17:28:09 UTC |
d2c9893 | Mitzi Morris | 31 March 2017, 21:44:15 UTC | creating default ident matrix as var_context; unit tests | 31 March 2017, 21:44:15 UTC |
7513dd8 | Mitzi Morris | 31 March 2017, 17:24:50 UTC | code cleanup for var_context readers | 31 March 2017, 17:24:50 UTC |
8abe6d5 | Mitzi Morris | 31 March 2017, 15:13:49 UTC | checkpointing | 31 March 2017, 15:13:49 UTC |
9fdb077 | Mitzi Morris | 31 March 2017, 02:58:05 UTC | code cleanup | 31 March 2017, 02:58:05 UTC |
eaba6b3 | Mitzi Morris | 31 March 2017, 01:36:54 UTC | code cleanup | 31 March 2017, 01:36:54 UTC |
1376921 | Mitzi Morris | 31 March 2017, 01:23:02 UTC | more unit tests | 31 March 2017, 01:23:02 UTC |
c784e14 | Mitzi Morris | 30 March 2017, 18:20:34 UTC | unit tests for hmc nuts dense and diag samplers | 30 March 2017, 18:20:34 UTC |
285e9dc | Mitzi Morris | 29 March 2017, 23:03:32 UTC | unit test HMC NUTS using mass matrix | 29 March 2017, 23:03:32 UTC |
21c94ce | Mitzi Morris | 29 March 2017, 14:18:44 UTC | all unit tests pass | 29 March 2017, 14:18:44 UTC |
b34e814 | Mitzi Morris | 29 March 2017, 05:29:57 UTC | unit test for samplers run | 29 March 2017, 05:29:57 UTC |
951b948 | Mitzi Morris | 29 March 2017, 05:29:07 UTC | remove stan compiler warning for model | 29 March 2017, 05:29:07 UTC |
32fea1d | Mitzi Morris | 29 March 2017, 02:22:50 UTC | checkpointing; threaded calls through hmc samplers, models compile | 29 March 2017, 02:22:50 UTC |
9cafe35 | Mitzi Morris | 22 March 2017, 22:08:03 UTC | Merge branch 'develop' of https://github.com/stan-dev/stan into feature/1706-mass-matrix | 22 March 2017, 22:08:03 UTC |
cfc2227 | Mitzi Morris | 22 March 2017, 22:04:55 UTC | Merge pull request #2250 from stan-dev/feature/issue-2249-update-math Update submodule for the Stan Math Library | 22 March 2017, 22:04:55 UTC |
5b5e317 | Bob Carpenter | 22 March 2017, 22:00:26 UTC | Merge pull request #2256 from stan-dev/bugfix/2254-parser-error-indexed-expressions Bugfix/2254 parser error indexed expressions | 22 March 2017, 22:00:26 UTC |
a33f920 | Mitzi Morris | 22 March 2017, 18:11:04 UTC | more test models | 22 March 2017, 18:11:04 UTC |
ab2dbff | Mitzi Morris | 22 March 2017, 17:55:31 UTC | bug fixed; some cleanup to grammar files | 22 March 2017, 17:55:31 UTC |
3f028b6 | Mitzi Morris | 21 March 2017, 23:01:49 UTC | add test model which triggers this bug | 21 March 2017, 23:01:49 UTC |
3c0c795 | Mitzi Morris | 21 March 2017, 22:47:37 UTC | threaded calls through to samples hmc_nuts_diag_e; code compiles, existing unit tests for mcmc/hmc and services passing | 21 March 2017, 22:47:37 UTC |
10eea5d | stan-buildbot | 21 March 2017, 16:41:09 UTC | Fixes #2249. Updates the Math submodule to 52d5635. | 21 March 2017, 16:41:09 UTC |
ec3e429 | Mitzi Morris | 21 March 2017, 04:38:34 UTC | add constructor with specified inv_mass_matrix_; rename mInv to inv_mass_matrix_ | 21 March 2017, 04:38:34 UTC |
4951f1d | Mitzi Morris | 19 March 2017, 20:02:15 UTC | Merge branch 'develop' of https://github.com/stan-dev/stan into develop | 19 March 2017, 20:02:15 UTC |
c49f82d | stan-buildbot | 19 March 2017, 16:34:14 UTC | Fixes #2249. Updates the Math submodule to c21bf4a7. | 19 March 2017, 16:34:14 UTC |
210cc28 | Bob Carpenter | 18 March 2017, 23:01:28 UTC | Merge pull request #2247 from stan-dev/feature/issue-2246-update-math Update submodule for the Stan Math Library | 18 March 2017, 23:01:28 UTC |
eb4229d | stan-buildbot | 17 March 2017, 23:33:31 UTC | Fixes #2246. Updates the Math submodule to 74ff5c0. | 17 March 2017, 23:33:31 UTC |
44a10af | Bob Carpenter | 16 March 2017, 03:07:54 UTC | Merge pull request #2244 from stan-dev/feature/1489-row-vector-expr Feature/1489 row vector expr | 16 March 2017, 03:07:54 UTC |
20a7ac4 | Mitzi Morris | 14 March 2017, 17:03:30 UTC | cpplint fix | 14 March 2017, 17:03:30 UTC |
5f40cd8 | Mitzi Morris | 14 March 2017, 16:24:16 UTC | code cleanup int_ double_literal - use compiler default operator= and copy constructor | 14 March 2017, 16:24:16 UTC |
703c8a7 | Mitzi Morris | 14 March 2017, 09:29:07 UTC | remove operator=, per code review comment | 14 March 2017, 09:29:07 UTC |
9e9138e | Mitzi Morris | 14 March 2017, 09:24:21 UTC | remove operator=, per code review comment | 14 March 2017, 09:24:21 UTC |
2aaca72 | Mitzi Morris | 13 March 2017, 04:02:11 UTC | Merge branch 'feature/1489-row-vector-expr' of https://github.com/stan-dev/stan into feature/1489-row-vector-expr | 13 March 2017, 04:02:11 UTC |
fe4d89d | Mitzi Morris | 13 March 2017, 04:01:48 UTC | cleanup | 13 March 2017, 04:01:48 UTC |
e1cc16a | Mitzi Morris | 13 March 2017, 04:00:46 UTC | fix for header tests | 13 March 2017, 04:00:46 UTC |
a3904cc | Mitzi Morris | 13 March 2017, 02:38:30 UTC | Delete generate_array_builder_adds_test.cpp | 13 March 2017, 02:38:30 UTC |
f82159f | Mitzi Morris | 13 March 2017, 00:15:01 UTC | put test for new generator function in with all generator tests - refactoring unit tests to match generator functions is future issue | 13 March 2017, 00:15:01 UTC |
12fdfe9 | Mitzi Morris | 13 March 2017, 00:03:57 UTC | fix doxygen warning | 13 March 2017, 00:03:57 UTC |
4b9d70b | Mitzi Morris | 12 March 2017, 23:25:57 UTC | changes per code review | 12 March 2017, 23:25:57 UTC |
68e73ba | Mitzi Morris | 12 March 2017, 20:00:27 UTC | Merge branch 'develop' of https://github.com/stan-dev/stan into feature/1489-row-vector-expr | 12 March 2017, 20:00:27 UTC |
dad3fd1 | Mitzi Morris | 10 March 2017, 15:41:37 UTC | Merge branch 'develop' of https://github.com/stan-dev/stan into develop | 10 March 2017, 15:41:37 UTC |
eab222f | Mitzi Morris | 08 March 2017, 22:13:38 UTC | Merge pull request #2243 from stan-dev/feature/issue-2242-update-math Update submodule for the Stan Math Library | 08 March 2017, 22:13:38 UTC |
f1e266f | Mitzi Morris | 08 March 2017, 19:10:06 UTC | Merge branch 'develop' of https://github.com/stan-dev/stan into develop | 08 March 2017, 19:10:06 UTC |
b35849a | Mitzi Morris | 08 March 2017, 18:44:53 UTC | delete old test model | 08 March 2017, 18:44:53 UTC |
3e24dd7 | Mitzi Morris | 08 March 2017, 18:42:06 UTC | doxygen fix | 08 March 2017, 18:42:06 UTC |
42b1f8f | Mitzi Morris | 08 March 2017, 18:23:56 UTC | doc new constructs | 08 March 2017, 18:23:56 UTC |
2128998 | Mitzi Morris | 07 March 2017, 19:23:22 UTC | more test models for row_vector, matrix expressions | 07 March 2017, 19:23:22 UTC |
37872c7 | Mitzi Morris | 07 March 2017, 19:22:50 UTC | more test models for row_vector, matrix expressions | 07 March 2017, 19:22:50 UTC |
1d775ca | stan-buildbot | 07 March 2017, 03:51:05 UTC | Fixes #2242. Updates the Math submodule to f51421b. | 07 March 2017, 03:51:05 UTC |
38f2d64 | Bob Carpenter | 07 March 2017, 03:41:05 UTC | Merge pull request #2235 from stan-dev/feature/issue-2234-update-math Update submodule for the Stan Math Library | 07 March 2017, 03:41:05 UTC |
c113f77 | stan-buildbot | 04 March 2017, 21:26:55 UTC | Fixes #2234. Updates the Math submodule to 253d283. | 04 March 2017, 21:26:55 UTC |
b47c9bc | stan-buildbot | 04 March 2017, 00:34:53 UTC | Fixes #2234. Updates the Math submodule to 6810012. | 04 March 2017, 00:34:53 UTC |
45de277 | stan-buildbot | 03 March 2017, 18:57:32 UTC | Fixes #2234. Updates the Math submodule to 8627016. | 03 March 2017, 18:57:32 UTC |
c55d293 | Mitzi Morris | 27 February 2017, 21:27:39 UTC | Merge branch 'develop' of https://github.com/stan-dev/stan into develop | 27 February 2017, 21:27:39 UTC |
9ea3e16 | Mitzi Morris | 24 February 2017, 22:56:17 UTC | unit tests and test models; standardize error messages | 24 February 2017, 22:56:17 UTC |
972e919 | seantalts | 24 February 2017, 21:51:39 UTC | Merge pull request #2236 from stan-dev/no-osx-travis Test dedupe - for now we run os x tests on Jenkins. | 24 February 2017, 21:51:39 UTC |
ba93326 | Mitzi Morris | 24 February 2017, 14:32:47 UTC | generator comments, more unit tests | 24 February 2017, 14:32:47 UTC |
4f18529 | Mitzi Morris | 24 February 2017, 14:21:25 UTC | matrix expressions compile | 24 February 2017, 14:21:25 UTC |
6b75f3e | Sean Talts | 23 February 2017, 20:52:58 UTC | Test dedupe - for now we run os x tests on Jenkins. And as Travis is the slowest part of Stan builds, we'll cut off the OS X builds to save time and get feedback to developers sooner. They're still covered by the Jenkins tests. | 23 February 2017, 20:52:58 UTC |
bd814f7 | stan-buildbot | 22 February 2017, 00:31:27 UTC | Fixes #2234. Updates the Math submodule to 49bfdde. | 22 February 2017, 00:31:27 UTC |
50aca30 | stan-buildbot | 21 February 2017, 19:12:02 UTC | Fixes #2234. Updates the Math submodule to f299535. | 21 February 2017, 19:12:02 UTC |
000aaf2 | Mitzi Morris | 21 February 2017, 15:11:26 UTC | vector expressions working; backed out matrix expressions; add, re-org test-models | 21 February 2017, 15:11:26 UTC |
da3b6a5 | Mitzi Morris | 21 February 2017, 13:28:01 UTC | checkpointing | 21 February 2017, 13:28:01 UTC |
70177c9 | Mitzi Morris | 19 February 2017, 21:46:05 UTC | parsing of vector and matrix expressions OK; generated code for matrix expressions won't compile | 19 February 2017, 21:46:05 UTC |
1f537bb | Mitzi Morris | 18 February 2017, 21:01:39 UTC | generator code row_vector_expr compiles; more unit tests | 18 February 2017, 21:01:39 UTC |
cb16496 | Mitzi Morris | 18 February 2017, 00:42:19 UTC | (simple) row_vector_expr parses; one unit test | 18 February 2017, 00:42:19 UTC |
d78c9b7 | Mitzi Morris | 17 February 2017, 21:07:12 UTC | added matrix_expr type, don't need row_vector_expr type | 17 February 2017, 21:07:12 UTC |
01505d0 | Mitzi Morris | 17 February 2017, 02:43:33 UTC | added row_vector_expr and vector_expr structs to expression and all visgens | 17 February 2017, 02:43:33 UTC |
5f09dfb | Mitzi Morris | 16 February 2017, 16:31:44 UTC | Merge branch 'develop' of https://github.com/stan-dev/stan into feature/1489-row-vector-expr | 16 February 2017, 16:31:44 UTC |
2348746 | Mitzi Morris | 16 February 2017, 16:30:08 UTC | Merge branch 'develop' of https://github.com/stan-dev/stan into develop | 16 February 2017, 16:30:08 UTC |
7b1df51 | Bob Carpenter | 16 February 2017, 05:28:09 UTC | Merge pull request #2228 from stan-dev/feature/2223-grammars-var-origin-logic Feature/2223 grammars var origin logic | 16 February 2017, 05:28:09 UTC |
71f50b6 | Mitzi Morris | 15 February 2017, 21:59:39 UTC | removed origin block type local_origin; parser doesn't add var lp__ to var_map; fixed bad test models designed to test use of var lp__ | 15 February 2017, 21:59:39 UTC |
813b8eb | seantalts | 15 February 2017, 21:01:10 UTC | Merge pull request #2230 from stan-dev/feature/issue-2229-update-math Update submodule for the Stan Math Library | 15 February 2017, 21:01:10 UTC |
4f94e39 | Mitzi Morris | 14 February 2017, 21:19:26 UTC | changes per code review | 14 February 2017, 21:19:26 UTC |
a52707c | stan-buildbot | 14 February 2017, 19:08:48 UTC | Fixes #2229. Updates the Math submodule to 337fb19. | 14 February 2017, 19:08:48 UTC |
4af49a9 | Mitzi Morris | 13 February 2017, 22:17:57 UTC | fix doxygen errors | 13 February 2017, 22:17:57 UTC |
4460c25 | Mitzi Morris | 13 February 2017, 21:04:46 UTC | fixed cpplint errors | 13 February 2017, 21:04:46 UTC |
368a19c | Mitzi Morris | 13 February 2017, 20:15:18 UTC | made scope class w/ private member vars and shorter method names | 13 February 2017, 20:15:18 UTC |
998755a | stan-buildbot | 13 February 2017, 20:11:24 UTC | Fixes #2229. Updates the Math submodule to 9a9cde0. | 13 February 2017, 20:11:24 UTC |
eb2a0c8 | Mitzi Morris | 13 February 2017, 15:54:07 UTC | rename struct var_origin to scope, change fuction and var names accordingly | 13 February 2017, 15:54:07 UTC |
60357c3 | stan-buildbot | 13 February 2017, 04:05:30 UTC | Fixes #2229. Updates the Math submodule to 827d549. | 13 February 2017, 04:05:30 UTC |
661aaf1 | stan-buildbot | 12 February 2017, 20:01:33 UTC | Fixes #2229. Updates the Math submodule to d544624. | 12 February 2017, 20:01:33 UTC |
834c857 | Mitzi Morris | 10 February 2017, 18:30:06 UTC | Merge branch 'develop' of https://github.com/stan-dev/stan into develop | 10 February 2017, 18:30:06 UTC |
3c8e944 | Mitzi Morris | 10 February 2017, 16:13:32 UTC | grammar cleanup, removed flag for is_return | 10 February 2017, 16:13:32 UTC |
222d436 | Mitzi Morris | 10 February 2017, 13:47:41 UTC | add methods to var_origin, cleanup semantic actions, remove unused ast functions | 10 February 2017, 13:47:41 UTC |
895a6ce | Mitzi Morris | 09 February 2017, 19:34:38 UTC | more functions on var_origin, semantic_actions_def cleanup | 09 February 2017, 19:34:38 UTC |
06c71a2 | Michael Betancourt | 09 February 2017, 19:17:15 UTC | Merge pull request #2210 from stan-dev/feature/issue-2182_tweak_metro_calc Tweak average metro prob calc to not use initial state | 09 February 2017, 19:17:15 UTC |