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%===== C O N T E N T S =====

\begin{document}

% Titlepage & ToC
\hypersetup{pageanchor=false}
\pagenumbering{roman}
\begin{titlepage}
\vspace*{7cm}
\begin{center}%
{\Large Tomato }\\
\vspace*{1cm}
{\large Generated by Doxygen 1.8.6}\\
\vspace*{0.5cm}
{\small Thu Nov 28 2019 13:55:00}\\
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\tableofcontents
\clearemptydoublepage
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%--- Begin generated contents ---
\chapter{Code of Conduct}
\label{md_codeofconduct}
\hypertarget{md_codeofconduct}{}
\input{md_codeofconduct}
\chapter{Contributing to T\-O\-M\-A\-T\-O}
\label{md_contributing}
\hypertarget{md_contributing}{}
\input{md_contributing}
\chapter{T\-O\-M\-A\-T\-O}
\label{md__r_e_a_d_m_e}
\hypertarget{md__r_e_a_d_m_e}{}
\input{md__r_e_a_d_m_e}
\chapter{Hierarchical Index}
\input{hierarchy}
\chapter{Class Index}
\input{annotated}
\chapter{File Index}
\input{files}
\chapter{Class Documentation}
\input{class_ox_1_1_calculator}
\input{class_calculator_t1}
\input{class_ox_1_1_calculator_t1_molli}
\input{class_ox_1_1_calculator_t1_shmolli}
\input{class_ox_1_1_calculator_t2}
\input{class_ox_1_1_calculator_t2_truncation}
\input{class_ox_1_1_factory_of_calculators}
\input{class_ox_1_1_factory_of_fitters}
\input{class_ox_1_1_factory_of_models}
\input{class_ox_1_1_factory_of_sign_calculators}
\input{class_ox_1_1_factory_of_start_point_calculators}
\input{class_ox_1_1_fitter}
\input{class_ox_1_1_image_calculator_t1}
\input{classitk_1_1_image_file_reader_k_w}
\input{class_k_w_util}
\input{class_ox_1_1_model}
\input{class_ox_1_1_model_t1_shmolli}
\input{class_ox_1_1_model_t1_three_param}
\input{class_ox_1_1_model_t1_two_param}
\input{class_ox_1_1_model_t2_three_param}
\input{class_ox_1_1_model_t2_two_param}
\input{class_ox_calculator_t1_shmolli}
\input{class_ox_1_1_sign_calculator}
\input{class_ox_1_1_sign_calculator_no_sign}
\input{class_ox_1_1_sign_calculator_real_imag}
\input{class_ox_1_1_sign_calculator_shmolli}
\input{class_ox_1_1_start_point_calculator}
\input{class_ox_1_1_start_point_calculator_basic}
\input{class_ox_1_1_start_point_calculator_shmolli}
\input{class_ox_1_1_test_data}
\input{class_ox_1_1_test_image}
\input{struct_ox_1_1_tomato_options}
\chapter{File Documentation}
\input{main_8cpp}
\input{_ox_original_shmolli_dicom_reader_8h}
\input{_ox_original_shmolli_dicom_reader_8hxx}
\input{_tomato_8h}
\input{_tomato__export_t1_8hxx}
\input{_tomato__export_t2_8hxx}
\input{itk_calculator_t1_image_filter_8h}
\input{itk_calculator_t1_image_filter_8hxx}
\input{_k_w_util_yaml_8h}
\input{_ox_calculator_8h}
\input{_ox_calculator_8hxx}
\input{_ox_calculator_t1_molli_8h}
\input{_ox_calculator_t1_molli_8hxx}
\input{_ox_calculator_t1_shmolli_8h}
\input{_ox_calculator_t1_shmolli_8hxx}
\input{_ox_calculator_t2_8h}
\input{_ox_calculator_t2_8hxx}
\input{_ox_calculator_t2_truncation_8h}
\input{_ox_calculator_t2_truncation_8hxx}
\input{_ox_factory_of_calculators_8h}
\input{_ox_factory_of_calculators_8hxx}
\input{_ox_factory_of_fitters_8h}
\input{_ox_factory_of_fitters_8hxx}
\input{_ox_factory_of_sign_calculators_8h}
\input{_ox_factory_of_sign_calculators_8hxx}
\input{_ox_factory_of_start_point_calculators_8h}
\input{_ox_factory_of_start_point_calculators_8hxx}
\input{_ox_fitter_8h}
\input{_ox_fitter_amoeba_nr2_8h}
\input{_ox_fitter_amoeba_vnl_8h}
\input{_ox_fitter_levenberg_marquardt_lmfit_8h}
\input{_ox_fitter_levenberg_marquardt_vnl_8h}
\input{_ox_model_8h}
\input{_ox_model_t1_adapter_lmfit_least_squares_8h}
\input{_ox_model_t1_adapter_vnl_cost_8h}
\input{_ox_model_t1_adapter_vnl_least_squares_8h}
\input{_ox_model_t1_shmolli_8h}
\input{_ox_model_t1_shmolli_8hxx}
\input{_ox_model_t1_three_param_8h}
\input{_ox_model_t1_three_param_8hxx}
\input{_ox_model_t1_two_param_8h}
\input{_ox_model_t1_two_param_8hxx}
\input{_ox_model_t2_three_param_8h}
\input{_ox_model_t2_three_param_8hxx}
\input{_ox_model_t2_two_param_8h}
\input{_ox_model_t2_two_param_8hxx}
\input{_ox_sign_calculator_8h}
\input{_ox_sign_calculator_no_sign_8h}
\input{_ox_sign_calculator_real_imag_8h}
\input{_ox_sign_calculator_shmolli_8h}
\input{_ox_start_point_calculator_8h}
\input{_ox_start_point_calculator_basic_8h}
\input{_ox_start_point_calculator_shmolli_8h}
\input{_tomato_api_8cpp}
\input{_tomato_api_8h}
\input{_tomato_colormap_8cpp}
\input{_tomato_colormap_8h}
\input{_tomato_one_pixel_8h}
\input{_tomato_options_8h}
\input{_tomato_options_8hxx}
\input{_tomato_parser_8h}
\input{_tomato_parser_8hxx}
\input{itk_pipeline___calculator_shmolli__test_8cpp}
\input{itk_pipeline__test_8cpp}
\input{itk_sort_inv_times_image_filter__test_8cpp}
\input{_k_w_util__test_8cpp}
\input{lmfit__test_8cpp}
\input{_ox_calculator_t1_molli__test_8cpp}
\input{_ox_calculator_t1_shmolli__test_8cpp}
\input{_ox_calculator_t1_shmolli_original__test_8cpp}
\input{_ox_calculator_t2__factory__test_8cpp}
\input{_ox_calculator_t2__test_8cpp}
\input{_ox_calculator_t2_truncation__test_8cpp}
\input{_ox_fitter_amoeba_private_nr2__test_8cpp}
\input{_ox_fitter_amoeba_vnl__test_8cpp}
\input{_ox_fitter_levenberg_marquardt_lmfit__test_8cpp}
\input{_ox_fitter_levenberg_marquardt_vnl__test_8cpp}
\input{_ox_image_calculator_t1__test_8cpp}
\input{_ox_model_t1_adapter_vnl_cost__test_8cpp}
\input{_ox_model_t1_adapter_vnl_least_squares__test_8cpp}
\input{_ox_model_t1_three_param__test_8cpp}
\input{_ox_model_t1_two_param__test_8cpp}
\input{_ox_model_t2_three_param__test_8cpp}
\input{_ox_sign_calculator_real_imag__test_8cpp}
\input{_ox_sign_calculator_shmolli__test_8cpp}
\input{_ox_start_point_calculator_basic__test_8cpp}
\input{_ox_start_point_calculator_shmolli__test_8cpp}
\input{_ox_test_data_8h}
\input{_ox_test_data_8hxx}
\input{_ox_test_data__test_8cpp}
\input{_ox_test_image_8h}
\input{_ox_test_image_8hxx}
\input{_tomato_parser__test_8cpp}
\input{_tomato_t1__test_8cpp}
\input{_tomato_t2__test_8cpp}
%--- End generated contents ---

% Index
\newpage
\phantomsection
\addcontentsline{toc}{chapter}{Index}
\printindex

\end{document}