swh:1:snp:f50ab94432af916b5fb8b4ad831e8dddded77084
Tip revision: 4ea2cc796e74de1e7cec3129450c1040a97d94c8 authored by thhoens on 22 June 2016, 17:23:20 UTC
Increased reductionBuffer size to determine if it causes the access violations.
Increased reductionBuffer size to determine if it causes the access violations.
Tip revision: 4ea2cc7
ImageTransformers.cpp
//
// Copyright (c) Microsoft. All rights reserved.
// Licensed under the MIT license. See LICENSE.md file in the project root for full license information.
//
#include "stdafx.h"
#include <algorithm>
#include <unordered_map>
#include <random>
#include "ImageTransformers.h"
#include "Config.h"
#include "ConcStack.h"
#include "StringUtil.h"
#include "ElementTypeUtils.h"
namespace Microsoft { namespace MSR { namespace CNTK
{
struct ImageSequenceData : DenseSequenceData
{
cv::Mat m_image;
// In case we do not copy data - we have to preserve the original sequence.
SequenceDataPtr m_original;
};
ImageTransformerBase::ImageTransformerBase(const ConfigParameters& readerConfig) : m_imageElementType(0)
{
m_seed = readerConfig(L"seed", 0u);
}
// The method describes how input stream is transformed to the output stream. Called once per applied stream.
// Currently for image transformations we only support dense streams of type double or float.
StreamDescription ImageTransformerBase::Transform(const StreamDescription& inputStream)
{
m_inputStream = inputStream;
m_outputStream = m_inputStream;
if (m_inputStream.m_storageType != StorageType::dense)
{
LogicError("ImageTransformerBase supports only dense input streams.");
}
if (m_inputStream.m_elementType == ElementType::tdouble)
{
m_imageElementType = CV_64F;
}
else if (m_inputStream.m_elementType == ElementType::tfloat)
{
m_imageElementType = CV_32F;
}
else
{
RuntimeError("Unsupported type");
}
return m_outputStream;
}
// Transforms a single sequence as open cv dense image. Called once per sequence.
SequenceDataPtr ImageTransformerBase::Transform(SequenceDataPtr sequence)
{
auto inputSequence = static_cast<const DenseSequenceData&>(*sequence);
ImageDimensions dimensions(*inputSequence.m_sampleLayout, HWC);
int columns = static_cast<int>(dimensions.m_width);
int rows = static_cast<int>(dimensions.m_height);
int channels = static_cast<int>(dimensions.m_numChannels);
auto result = std::make_shared<ImageSequenceData>();
int type = CV_MAKETYPE(m_imageElementType, channels);
cv::Mat buffer = cv::Mat(rows, columns, type, inputSequence.m_data);
Apply(sequence->m_id, buffer);
if (!buffer.isContinuous())
{
buffer = buffer.clone();
}
else
{
result->m_original = sequence;
}
assert(buffer.isContinuous());
result->m_image = buffer;
result->m_data = buffer.ptr();
result->m_numberOfSamples = inputSequence.m_numberOfSamples;
ImageDimensions outputDimensions(buffer.cols, buffer.rows, buffer.channels());
result->m_sampleLayout = std::make_shared<TensorShape>(outputDimensions.AsTensorShape(HWC));
return result;
}
//////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////
CropTransformer::CropTransformer(const ConfigParameters& config) : ImageTransformerBase(config)
{
floatargvector cropRatio = config(L"cropRatio", "1.0");
m_cropRatioMin = cropRatio[0];
m_cropRatioMax = cropRatio[1];
if (!(0 < m_cropRatioMin && m_cropRatioMin <= 1.0) ||
!(0 < m_cropRatioMax && m_cropRatioMax <= 1.0) ||
m_cropRatioMin > m_cropRatioMax)
{
RuntimeError("Invalid cropRatio value, must be > 0 and <= 1. cropMin must "
"<= cropMax");
}
m_jitterType = ParseJitterType(config(L"jitterType", ""));
m_cropType = ImageConfigHelper::ParseCropType(config(L"cropType", ""));
if (!config.ExistsCurrent(L"hflip"))
{
m_hFlip = m_cropType == CropType::Random;
}
else
{
m_hFlip = config(L"hflip");
}
m_aspectRatioRadius = config(L"aspectRatioRadius", ConfigParameters::Array(doubleargvector(vector<double>{0.0})));
}
void CropTransformer::StartEpoch(const EpochConfiguration &config)
{
m_curAspectRatioRadius = m_aspectRatioRadius[config.m_epochIndex];
if (!(0 <= m_curAspectRatioRadius && m_curAspectRatioRadius <= 1.0))
InvalidArgument("aspectRatioRadius must be >= 0.0 and <= 1.0");
ImageTransformerBase::StartEpoch(config);
}
void CropTransformer::Apply(size_t id, cv::Mat &mat)
{
auto seed = GetSeed();
auto rng = m_rngs.pop_or_create([seed]() { return std::make_unique<std::mt19937>(seed); });
double ratio = 1;
switch (m_jitterType)
{
case RatioJitterType::None:
ratio = m_cropRatioMin;
break;
case RatioJitterType::UniRatio:
if (m_cropRatioMin == m_cropRatioMax)
{
ratio = m_cropRatioMin;
}
else
{
ratio = UniRealT(m_cropRatioMin, m_cropRatioMax)(*rng);
assert(m_cropRatioMin <= ratio && ratio < m_cropRatioMax);
}
break;
default:
RuntimeError("Jitter type currently not implemented.");
}
int viewIndex = m_cropType == CropType::MultiView10 ? (int)(id % 10) : 0;
mat = mat(GetCropRect(m_cropType, viewIndex, mat.rows, mat.cols, ratio, *rng));
if ((m_hFlip && std::bernoulli_distribution()(*rng)) ||
viewIndex >= 5)
{
cv::flip(mat, mat, 1);
}
m_rngs.push(std::move(rng));
}
CropTransformer::RatioJitterType
CropTransformer::ParseJitterType(const std::string &src)
{
if (src.empty() || AreEqualIgnoreCase(src, "none"))
{
return RatioJitterType::None;
}
if (AreEqualIgnoreCase(src, "uniratio"))
{
return RatioJitterType::UniRatio;
}
if (AreEqualIgnoreCase(src, "unilength"))
{
return RatioJitterType::UniLength;
}
if (AreEqualIgnoreCase(src, "uniarea"))
{
return RatioJitterType::UniArea;
}
RuntimeError("Invalid jitter type: %s.", src.c_str());
}
cv::Rect CropTransformer::GetCropRect(CropType type, int viewIndex, int crow, int ccol,
double cropRatio, std::mt19937 &rng)
{
assert(crow > 0);
assert(ccol > 0);
assert(0 < cropRatio && cropRatio <= 1.0);
// Get square crop size that preserves aspect ratio.
int cropSize = (int)(std::min(crow, ccol) * cropRatio);
int cropSizeX = cropSize;
int cropSizeY = cropSize;
// Change aspect ratio, if this option is enabled.
if (m_curAspectRatioRadius > 0)
{
double factor = 1.0 + UniRealT(-m_curAspectRatioRadius, m_curAspectRatioRadius)(rng);
double area = cropSize * cropSize;
double newArea = area * factor;
if (std::bernoulli_distribution()(rng))
{
cropSizeX = (int)std::sqrt(newArea);
cropSizeY = (int)(area / cropSizeX);
}
else
{
cropSizeY = (int)std::sqrt(newArea);
cropSizeX = (int)(area / cropSizeY);
}
// This clamping should be ok if jittering ratio is not too big.
cropSizeX = std::min(cropSizeX, ccol);
cropSizeY = std::min(cropSizeY, crow);
}
int xOff = -1;
int yOff = -1;
switch (type)
{
case CropType::Center:
assert(viewIndex == 0);
xOff = (ccol - cropSizeX) / 2;
yOff = (crow - cropSizeY) / 2;
break;
case CropType::Random:
assert(viewIndex == 0);
xOff = UniIntT(0, ccol - cropSizeX)(rng);
yOff = UniIntT(0, crow - cropSizeY)(rng);
break;
case CropType::MultiView10:
{
assert(0 <= viewIndex && viewIndex < 10);
// 0 - 4: 4 corners + center crop. 5 - 9: same, but with a flip.
int isubView = viewIndex % 5;
switch (isubView)
{
// top-left
case 0:
xOff = 0;
yOff = 0;
break;
// top-right
case 1:
xOff = ccol - cropSizeX;
yOff = 0;
break;
// bottom-left
case 2:
xOff = 0;
yOff = crow - cropSizeY;
break;
// bottom-right
case 3:
xOff = ccol - cropSizeX;
yOff = crow - cropSizeY;
break;
// center
case 4:
xOff = (ccol - cropSizeX) / 2;
yOff = (crow - cropSizeY) / 2;
break;
}
break;
}
default:
assert(false);
}
assert(0 <= xOff && xOff <= ccol - cropSizeX);
assert(0 <= yOff && yOff <= crow - cropSizeY);
return cv::Rect(xOff, yOff, cropSizeX, cropSizeY);
}
//////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////
ScaleTransformer::ScaleTransformer(const ConfigParameters& config) : ImageTransformerBase(config)
{
m_interpMap.emplace("nearest", cv::INTER_NEAREST);
m_interpMap.emplace("linear", cv::INTER_LINEAR);
m_interpMap.emplace("cubic", cv::INTER_CUBIC);
m_interpMap.emplace("lanczos", cv::INTER_LANCZOS4);
m_imgWidth = config(L"width");
m_imgHeight = config(L"height");
m_imgChannels = config(L"channels");
size_t cfeat = m_imgWidth * m_imgHeight * m_imgChannels;
if (cfeat == 0 || cfeat > std::numeric_limits<size_t>().max() / 2)
RuntimeError("Invalid image dimensions.");
m_interp.clear();
std::stringstream ss{config(L"interpolations", "")};
for (std::string token = ""; std::getline(ss, token, ':');)
{
// Explicit cast required for GCC.
std::transform(token.begin(), token.end(), token.begin(),
(int (*) (int)) std::tolower);
StrToIntMapT::const_iterator res = m_interpMap.find(token);
if (res != m_interpMap.end())
m_interp.push_back((*res).second);
}
if (m_interp.size() == 0)
m_interp.push_back(cv::INTER_LINEAR);
}
// The method describes how input stream is transformed to the output stream. Called once per applied stream.
// Scale transformer transforms the stream so that all samples are of the same size.
StreamDescription ScaleTransformer::Transform(const StreamDescription& inputStream)
{
ImageTransformerBase::Transform(inputStream);
m_outputStream.m_sampleLayout = std::make_shared<TensorShape>(ImageDimensions(m_imgWidth, m_imgHeight, m_imgChannels).AsTensorShape(HWC));
return m_outputStream;
}
void ScaleTransformer::Apply(size_t id, cv::Mat &mat)
{
UNUSED(id);
// If matrix has not been converted to the right type, do it now as rescaling
// requires floating point type.
if (mat.type() != CV_MAKETYPE(m_imageElementType, m_imgChannels))
{
mat.convertTo(mat, m_imageElementType);
}
auto seed = GetSeed();
auto rng = m_rngs.pop_or_create([seed]() { return std::make_unique<std::mt19937>(seed); });
auto index = UniIntT(0, static_cast<int>(m_interp.size()) - 1)(*rng);
assert(m_interp.size() > 0);
cv::resize(mat, mat, cv::Size((int)m_imgWidth, (int)m_imgHeight), 0, 0, m_interp[index]);
m_rngs.push(std::move(rng));
}
//////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////
MeanTransformer::MeanTransformer(const ConfigParameters& config) : ImageTransformerBase(config)
{
std::wstring meanFile = config(L"meanFile", L"");
if (meanFile.empty())
m_meanImg.release();
else
{
cv::FileStorage fs;
// REVIEW alexeyk: this sort of defeats the purpose of using wstring at
// all... [fseide] no, only OpenCV has this problem.
fs.open(msra::strfun::utf8(meanFile).c_str(), cv::FileStorage::READ);
if (!fs.isOpened())
RuntimeError("Could not open file: %ls", meanFile.c_str());
fs["MeanImg"] >> m_meanImg;
int cchan;
fs["Channel"] >> cchan;
int crow;
fs["Row"] >> crow;
int ccol;
fs["Col"] >> ccol;
if (cchan * crow * ccol !=
m_meanImg.channels() * m_meanImg.rows * m_meanImg.cols)
RuntimeError("Invalid data in file: %ls", meanFile.c_str());
fs.release();
m_meanImg = m_meanImg.reshape(cchan, crow);
}
}
void MeanTransformer::Apply(size_t id, cv::Mat &mat)
{
UNUSED(id);
assert(m_meanImg.size() == cv::Size(0, 0) ||
(m_meanImg.size() == mat.size() &&
m_meanImg.channels() == mat.channels()));
// REVIEW alexeyk: check type conversion (float/double).
if (m_meanImg.size() == mat.size())
{
mat = mat - m_meanImg;
}
}
// The method describes how input stream is transformed to the output stream. Called once per applied stream.
// Transpose transformer expects the dense input stream with samples as HWC and outputs CHW.
StreamDescription TransposeTransformer::Transform(const StreamDescription& inputStream)
{
m_inputStream = inputStream;
if (m_inputStream.m_storageType != StorageType::dense)
{
LogicError("Transpose transformer supports only dense streams.");
}
// Changing from NHWC to NCHW
ImageDimensions dimensions(*m_inputStream.m_sampleLayout, HWC);
m_outputStream = m_inputStream;
m_outputStream.m_sampleLayout = std::make_shared<TensorShape>(dimensions.AsTensorShape(CHW));
return m_outputStream;
}
// Transformation of the sequence.
SequenceDataPtr TransposeTransformer::Transform(SequenceDataPtr sequence)
{
if (m_inputStream.m_elementType == ElementType::tdouble)
{
return TypedTransform<double>(sequence);
}
if (m_inputStream.m_elementType == ElementType::tfloat)
{
return TypedTransform<float>(sequence);
}
RuntimeError("Unsupported type");
}
// The class represents a sequence that owns an internal data buffer.
// Passed from the TransposeTransformer.
// TODO: Transposition potentially could be done in place (alexeyk: performance might be much worse than of out-of-place transpose).
struct DenseSequenceWithBuffer : DenseSequenceData
{
std::vector<char> m_buffer;
};
template <class TElemType>
SequenceDataPtr TransposeTransformer::TypedTransform(SequenceDataPtr sequence)
{
auto inputSequence = static_cast<DenseSequenceData&>(*sequence);
assert(inputSequence.m_numberOfSamples == 1);
size_t count = m_inputStream.m_sampleLayout->GetNumElements() * GetSizeByType(m_inputStream.m_elementType);
auto result = std::make_shared<DenseSequenceWithBuffer>();
result->m_buffer.resize(count);
ImageDimensions dimensions(*m_inputStream.m_sampleLayout, ImageLayoutKind::HWC);
size_t rowCount = dimensions.m_height * dimensions.m_width;
size_t channelCount = dimensions.m_numChannels;
auto src = reinterpret_cast<TElemType*>(inputSequence.m_data);
auto dst = reinterpret_cast<TElemType*>(result->m_buffer.data());
for (size_t irow = 0; irow < rowCount; irow++)
{
for (size_t icol = 0; icol < channelCount; icol++)
{
dst[icol * rowCount + irow] = src[irow * channelCount + icol];
}
}
result->m_sampleLayout = m_outputStream.m_sampleLayout;
result->m_data = result->m_buffer.data();
result->m_numberOfSamples = inputSequence.m_numberOfSamples;
return result;
}
//////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////
IntensityTransformer::IntensityTransformer(const ConfigParameters &config) : ImageTransformerBase(config)
{
m_stdDev = config(L"intensityStdDev", ConfigParameters::Array(doubleargvector(vector<double>{0.0})));
std::wstring intFile = config(L"intensityFile", L"");
if (intFile.empty())
{
m_eigVal.release();
m_eigVec.release();
}
else
{
cv::FileStorage fs;
fs.open(msra::strfun::utf8(intFile).c_str(), cv::FileStorage::READ);
if (!fs.isOpened())
RuntimeError("Could not open file: %ls", intFile.c_str());
fs["EigVal"] >> m_eigVal;
if (m_eigVal.rows != 1 || m_eigVal.cols != 3 || m_eigVal.channels() != 1)
RuntimeError("Invalid EigVal data in file: %ls", intFile.c_str());
fs["EigVec"] >> m_eigVec;
if (m_eigVec.rows != 3 || m_eigVec.cols != 3 || m_eigVec.channels() != 1)
RuntimeError("Invalid EigVec data in file: %ls", intFile.c_str());
fs.release();
}
}
void IntensityTransformer::StartEpoch(const EpochConfiguration &config)
{
m_curStdDev = m_stdDev[config.m_epochIndex];
ImageTransformerBase::StartEpoch(config);
}
void IntensityTransformer::Apply(size_t id, cv::Mat &mat)
{
UNUSED(id);
if (m_eigVal.empty() || m_eigVec.empty() || m_curStdDev == 0)
return;
if (mat.type() == CV_64FC(mat.channels()))
Apply<double>(mat);
else if (mat.type() == CV_32FC(mat.channels()))
Apply<float>(mat);
else
RuntimeError("Unsupported type");
}
template <typename ElemType>
void IntensityTransformer::Apply(cv::Mat &mat)
{
auto seed = GetSeed();
auto rng = m_rngs.pop_or_create([seed]() { return std::make_unique<std::mt19937>(seed); } );
// Using single precision as EigVal and EigVec matrices are single precision.
std::normal_distribution<float> d(0, (float)m_curStdDev);
cv::Mat alphas(1, 3, CV_32FC1);
assert(m_eigVal.rows == 1 && m_eigVec.cols == 3);
alphas.at<float>(0) = d(*rng) * m_eigVal.at<float>(0);
alphas.at<float>(1) = d(*rng) * m_eigVal.at<float>(1);
alphas.at<float>(2) = d(*rng) * m_eigVal.at<float>(2);
m_rngs.push(std::move(rng));
assert(m_eigVec.rows == 3 && m_eigVec.cols == 3);
cv::Mat shifts = m_eigVec * alphas.t();
// For multi-channel images data is in BGR format.
size_t cdst = mat.rows * mat.cols * mat.channels();
ElemType* pdstBase = reinterpret_cast<ElemType*>(mat.data);
for (ElemType* pdst = pdstBase; pdst < pdstBase + cdst;)
{
for (int c = 0; c < mat.channels(); c++)
{
float shift = shifts.at<float>(mat.channels() - c - 1);
*pdst = std::min(std::max(*pdst + shift, (ElemType)0), (ElemType)255);
pdst++;
}
}
}
//////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////
ColorTransformer::ColorTransformer(const ConfigParameters &config) : ImageTransformerBase(config)
{
m_brightnessRadius = config(L"brightnessRadius", ConfigParameters::Array(doubleargvector(vector<double>{0.0})));
m_contrastRadius = config(L"contrastRadius", ConfigParameters::Array(doubleargvector(vector<double>{0.0})));
m_saturationRadius = config(L"saturationRadius", ConfigParameters::Array(doubleargvector(vector<double>{0.0})));
}
void ColorTransformer::StartEpoch(const EpochConfiguration &config)
{
m_curBrightnessRadius = m_brightnessRadius[config.m_epochIndex];
if (!(0 <= m_curBrightnessRadius && m_curBrightnessRadius <= 1.0))
InvalidArgument("brightnessRadius must be >= 0.0 and <= 1.0");
m_curContrastRadius = m_contrastRadius[config.m_epochIndex];
if (!(0 <= m_curContrastRadius && m_curContrastRadius <= 1.0))
InvalidArgument("contrastRadius must be >= 0.0 and <= 1.0");
m_curSaturationRadius = m_saturationRadius[config.m_epochIndex];
if (!(0 <= m_curSaturationRadius && m_curSaturationRadius <= 1.0))
InvalidArgument("saturationRadius must be >= 0.0 and <= 1.0");
ImageTransformerBase::StartEpoch(config);
}
void ColorTransformer::Apply(size_t id, cv::Mat &mat)
{
UNUSED(id);
if (m_curBrightnessRadius == 0 && m_curContrastRadius == 0 && m_curSaturationRadius == 0)
return;
if (mat.type() == CV_64FC(mat.channels()))
Apply<double>(mat);
else if (mat.type() == CV_32FC(mat.channels()))
Apply<float>(mat);
else
RuntimeError("Unsupported type");
}
template <typename ElemType>
void ColorTransformer::Apply(cv::Mat &mat)
{
auto seed = GetSeed();
auto rng = m_rngs.pop_or_create([seed]() { return std::make_unique<std::mt19937>(seed); });
if (m_curBrightnessRadius > 0 || m_curContrastRadius > 0)
{
// To change brightness and/or contrast the following standard transformation is used:
// Xij = alpha * Xij + beta, where
// alpha is a contrast adjustment and beta - brightness adjustment.
ElemType beta = 0;
if (m_curBrightnessRadius > 0)
{
UniRealT d(-m_curBrightnessRadius, m_curBrightnessRadius);
// Compute mean value of the image.
cv::Scalar imgMean = cv::sum(cv::sum(mat));
// Compute beta as a fraction of the mean.
beta = (ElemType)(d(*rng) * imgMean[0] / (mat.rows * mat.cols * mat.channels()));
}
ElemType alpha = 1;
if (m_curContrastRadius > 0)
{
UniRealT d(-m_curContrastRadius, m_curContrastRadius);
alpha = (ElemType)(1 + d(*rng));
}
// Could potentially use mat.convertTo(mat, -1, alpha, beta)
// but it does not do range checking for single/double precision matrix. saturate_cast won't work either.
size_t count = mat.rows * mat.cols * mat.channels();
ElemType* pbase = reinterpret_cast<ElemType*>(mat.data);
for (ElemType* p = pbase; p < pbase + count; p++)
{
*p = std::min(std::max(*p * alpha + beta, (ElemType)0), (ElemType)255);
}
}
if (m_curSaturationRadius > 0 && mat.channels() == 3)
{
UniRealT d(-m_curSaturationRadius, m_curSaturationRadius);
double ratio = 1.0 + d(*rng);
assert(0 <= ratio && ratio <= 2);
auto hsv = m_hsvTemp.pop_or_create([]() { return std::make_unique<cv::Mat>(); });
// To change saturation, we need to convert the image to HSV format first,
// the change S channgel and convert the image back to BGR format.
cv::cvtColor(mat, *hsv, CV_BGR2HSV);
assert(hsv->rows == mat.rows && hsv->cols == mat.cols);
size_t count = hsv->rows * hsv->cols * mat.channels();
ElemType* phsvBase = reinterpret_cast<ElemType*>(hsv->data);
for (ElemType* phsv = phsvBase; phsv < phsvBase + count; phsv += 3)
{
const int HsvIndex = 1;
phsv[HsvIndex] = std::min((ElemType)(phsv[HsvIndex] * ratio), (ElemType)1);
}
cv::cvtColor(*hsv, mat, CV_HSV2BGR);
m_hsvTemp.push(std::move(hsv));
}
m_rngs.push(std::move(rng));
}
}}}