swh:1:snp:f521c49ab17ef7db6ec70b2430e1ed203f50383f
Tip revision: 1f4191c02ec16ac1f7ac5516516cc0706954d06e authored by Wenqing Wang on 24 June 2021, 09:48:45 UTC
[Test/postLIE] added a 3D test for post LIE
[Test/postLIE] added a 3D test for post LIE
Tip revision: 1f4191c
MeshComponentMap.h
/**
* \author Norihiro Watanabe
* \date 2013-04-16
*
* \file
* \copyright
* Copyright (c) 2012-2021, OpenGeoSys Community (http://www.opengeosys.org)
* Distributed under a Modified BSD License.
* See accompanying file LICENSE.txt or
* http://www.opengeosys.org/project/license
*/
#pragma once
#include "ComponentGlobalIndexDict.h"
#include "MeshLib/MeshSubset.h"
#include "numlib_export.h"
namespace NumLib
{
/// Ordering of components in global matrix/vector.
enum class ComponentOrder
{
BY_COMPONENT, ///< Ordering data by component type
BY_LOCATION ///< Ordering data by spatial location
};
/// Multidirectional mapping between mesh entities and degrees of freedom.
class MeshComponentMap final
{
public:
using Location = MeshLib::Location;
public:
/// \param components a vector of components
/// \param order type of ordering values in a vector
MeshComponentMap(std::vector<MeshLib::MeshSubset> const& components,
ComponentOrder order);
/// Creates a multi-component subset of the current mesh component map.
/// The order (BY_LOCATION/BY_COMPONENT) of components is the same as of the
/// current map.
///
/// \attention For each component the same new_mesh_subset will be used.
///
/// \param bulk_mesh_subsets components that should remain in the created
/// subset, one for each global component.
/// \param new_mesh_subset The constraining mesh subset with a mapping of
/// node ids to the bulk mesh nodes.
/// \param new_global_component_ids The components for which the
/// bulk_mesh_subsets should be intersected with the new_mesh_subset.
MeshComponentMap getSubset(
std::vector<MeshLib::MeshSubset> const& bulk_mesh_subsets,
MeshLib::MeshSubset const& new_mesh_subset,
std::vector<int> const& new_global_component_ids) const;
/// The number of dofs including the those located in the ghost nodes.
std::size_t dofSizeWithGhosts() const { return _dict.size(); }
/// Component ids at given location \c l.
///
/// | Location | ComponentID |
/// | -------- | ----------- |
/// | l | comp_id_1 |
/// | l | ... |
/// | l | comp_id_n |
std::vector<int> getComponentIDs(const Location& l) const;
/// Global index of the given component id at given location \c l.
///
/// | Location | ComponentID | GlobalIndex |
/// | -------- | ----------- | ----------- |
/// | l | comp_id | gi |
GlobalIndexType getGlobalIndex(Location const& l, int const comp_id) const;
/// Global indices for all components at the given location \c l.
///
/// If there is more than one component at the given location, the
/// function returns a vector containing global indices for each component.
///
/// | Location | ComponentID | GlobalIndex |
/// | -------- | ----------- | ----------- |
/// | l | comp_id_1 | gi23 |
/// | ... | ... | ... |
/// | l | comp_id_k | gi45 |
std::vector<GlobalIndexType> getGlobalIndices(const Location& l) const;
/// Global indices for all components at all given locations \c ls ordered
/// by location. The return list is sorted first by location.
///
/// | Location | ComponentID | GlobalIndex |
/// | -------- | ----------- | ----------- |
/// | l_1 | comp_id_1 | gi23 |
/// | ... | ... | ... |
/// | l_1 | comp_id_k | gi45 |
/// | l_2 | comp_id_1 | gi46 |
/// | ... | ... | ... |
/// | l_2 | comp_id_m | gi67 |
/// | ... | ... | ... |
/// | l_n | comp_id_n | gi78 |
std::vector<GlobalIndexType> getGlobalIndicesByLocation(
const std::vector<Location>& ls) const;
/// Global indices for all components at all given locations \c ls ordered
/// by component ids. The return list is sorted first by component ids.
/// | Location | ComponentID | GlobalIndex |
/// | -------- | ----------- | ----------- |
/// | l_1 | comp_id_1 | gi23 |
/// | ... | ... | ... |
/// | l_k | comp_id_1 | gi45 |
/// | l_1 | comp_id_2 | gi46 |
/// | ... | ... | ... |
/// | l_m | comp_id_2 | gi78 |
/// | ... | ... | ... |
/// | l_n | comp_id_n | gi89 |
std::vector<GlobalIndexType> getGlobalIndicesByComponent(
const std::vector<Location>& ls) const;
/// Get the number of local unknowns excluding those associated
/// with ghost nodes (for DDC with node-wise mesh partitioning).
std::size_t dofSizeWithoutGhosts() const { return _num_local_dof; }
/// Get ghost indices (for DDC).
std::vector<GlobalIndexType> const& getGhostIndices() const
{
return _ghosts_indices;
}
/// Computes the index in a local (for DDC) vector for a given location and
/// component.
/// When domain decomposition is not used, it is equal to getGlobalIndex().
/// The range is needed to compute the offset for non-ghost locations and
/// also to map ghost locations.
GlobalIndexType getLocalIndex(Location const& l, int const comp_id,
std::size_t const range_begin,
std::size_t const range_end) const;
/// A value returned if no global index was found for the requested
/// location/component. The value is implementation dependent.
static NUMLIB_EXPORT GlobalIndexType const nop;
#ifndef NDEBUG
const detail::ComponentGlobalIndexDict& getDictionary() const
{
return _dict;
}
friend std::ostream& operator<<(std::ostream& os, MeshComponentMap const& m)
{
os << "Dictionary size: " << m._dict.size() << "\n";
for (auto l : m._dict)
os << l << "\n";
return os;
}
#endif // NDEBUG
private:
/// Private constructor used by internally created mesh component maps.
explicit MeshComponentMap(detail::ComponentGlobalIndexDict& dict)
: _dict(dict)
{
}
/// Looks up if a line is already stored in the dictionary.
/// \attention The line for the location l and component id must exist,
/// the behaviour is undefined otherwise.
/// \return a copy of the line.
detail::Line getLine(Location const& l, int const comp_id) const;
void renumberByLocation(GlobalIndexType offset = 0);
detail::ComponentGlobalIndexDict _dict;
/// Number of local unknowns excluding those associated
/// with ghost nodes (for domain decomposition).
std::size_t _num_local_dof = 0;
#ifdef USE_PETSC
/// Number of global unknowns. Used internally only.
std::size_t _num_global_dof = 0;
#endif
/// Global ID for ghost entries
std::vector<GlobalIndexType> _ghosts_indices;
/// \param components a vector of components
/// \param order type of ordering values in a vector
void createSerialMeshComponentMap(
std::vector<MeshLib::MeshSubset> const& components,
ComponentOrder order);
#ifdef USE_PETSC
/// \param components a vector of components
/// \param order type of ordering values in a vector
void createParallelMeshComponentMap(
std::vector<MeshLib::MeshSubset> const& components,
ComponentOrder order);
#endif
};
} // namespace NumLib