41b4319 | renchao.lu | 12 March 2021, 00:33:42 UTC | Merge branch 'Cleanup' into 'master' [CL] small clean-ups See merge request ogs/ogs!3507 | 12 March 2021, 00:33:42 UTC |
54f019e | renchao_lu | 12 March 2021, 00:26:53 UTC | [CL] rename function. | 12 March 2021, 00:26:53 UTC |
07ca09c | renchao_lu | 12 March 2021, 00:23:17 UTC | [CL] remove default setting. | 12 March 2021, 00:23:17 UTC |
01d0cf3 | renchao_lu | 12 March 2021, 00:22:10 UTC | [CL] set private access specifier. | 12 March 2021, 00:22:10 UTC |
a6e98b1 | renchao_lu | 12 March 2021, 00:15:30 UTC | [CL] Drop function executeInitialCalculation(). | 12 March 2021, 00:20:29 UTC |
cd5061b | renchao_lu | 12 March 2021, 00:08:30 UTC | [CL] rename function. | 12 March 2021, 00:20:26 UTC |
3e11546 | renchao_lu | 12 March 2021, 00:04:55 UTC | [CL] reset access specifier. | 12 March 2021, 00:19:50 UTC |
3765410 | Dmitry Yu. Naumov | 11 March 2021, 19:21:08 UTC | Merge branch 'move_properties_to_medium' into 'master' [THM/HM/RF] Change property assignment from solid phase to medium (permeability, storage, biot_coefficient, porosity) Closes #3032 See merge request ogs/ogs!3114 | 11 March 2021, 19:21:08 UTC |
a95dcf4 | Dmitry Yu. Naumov | 11 March 2021, 19:19:41 UTC | Merge branch 'MPL_vapour_diffusion' into 'master' Added vapour diffusion type and the FEBEX type vapour_diffusion property See merge request ogs/ogs!3491 | 11 March 2021, 19:19:41 UTC |
64a39ec | renchao_lu | 05 March 2021, 15:36:46 UTC | [T] update .prj file. | 11 March 2021, 15:15:27 UTC |
5f366e5 | renchao_lu | 05 March 2021, 15:10:39 UTC | [CL] set reactant molality. | 11 March 2021, 15:15:27 UTC |
6a93b86 | renchao_lu | 05 March 2021, 14:40:34 UTC | [CL] Rename function. | 11 March 2021, 15:15:27 UTC |
ddb21ed | renchao_lu | 05 March 2021, 15:28:06 UTC | [CL] initialize volume fraction. | 11 March 2021, 15:15:27 UTC |
ced1411 | renchao_lu | 05 March 2021, 12:00:35 UTC | [CL] Add class member volume_fraction. | 11 March 2021, 15:15:27 UTC |
4d1ff83 | Jörg Buchwald | 08 March 2021, 21:15:51 UTC | move porosity, storage, biot-coefficient and permeability to medium (RichardFlow) | 11 March 2021, 13:24:55 UTC |
1624502 | Jörg Buchwald | 08 March 2021, 21:52:04 UTC | move porosity, storage, biot-coefficient and permeability to medium (HM process) | 11 March 2021, 13:24:55 UTC |
03cfb1e | joerg | 14 September 2020, 19:04:04 UTC | move porosity, storage, biot-coefficient and permeability to medium (THM process) move porosity, storage, biot-coefficient and permeability in THM project files | 11 March 2021, 13:24:55 UTC |
f538015 | Wenqing Wang | 10 March 2021, 16:46:55 UTC | [UnitTest/VapourDiffusionFEBEX] Kept the consistency of the position of const qualifier | 11 March 2021, 09:41:46 UTC |
45cd627 | Dmitri Naumov | 10 March 2021, 11:44:49 UTC | [MatL] Replace tabs with spaces. | 11 March 2021, 09:41:46 UTC |
d76d6df | Dmitri Naumov | 10 March 2021, 11:40:04 UTC | [T/MatL] FEBEX; Use array to avoid heap allocs. Since the list of values is static, an array is sufficient. | 11 March 2021, 09:41:46 UTC |
8037529 | Dmitri Naumov | 10 March 2021, 11:38:28 UTC | [T/MatL] FEBEX; Use for-loop local variables. Reducing scope of counter. | 11 March 2021, 09:41:45 UTC |
31bf050 | Dmitri Naumov | 10 March 2021, 11:36:46 UTC | [T/MatL] FEBEX; Remove unused includes. | 11 March 2021, 09:41:45 UTC |
eea8b50 | Wenqing Wang | 06 March 2021, 12:36:38 UTC | [Doc] Added a description of VapourDiffusionFEBEX | 11 March 2021, 09:41:45 UTC |
9d51afd | Wenqing Wang | 07 March 2021, 09:33:40 UTC | [bib] Added three references | 11 March 2021, 09:41:45 UTC |
87ea295 | Wenqing Wang | 05 March 2021, 17:07:57 UTC | [Doc] Added the parameter documentation for VapourDiffusionFEBEX | 11 March 2021, 09:41:45 UTC |
e85f228 | Wenqing Wang | 05 March 2021, 16:59:31 UTC | [UnitTest] Added a test for VapourDiffusionFEBEX | 11 March 2021, 09:41:45 UTC |
5c2e9d5 | Wenqing Wang | 05 March 2021, 16:59:03 UTC | [MPL] Added a new property type: vapour_diffusion | 11 March 2021, 09:41:45 UTC |
f7fa95f | Wenqing Wang | 05 March 2021, 16:58:36 UTC | [MPL] Registered VapourDiffusion | 11 March 2021, 09:41:45 UTC |
a08ff98 | Wenqing Wang | 05 March 2021, 16:57:44 UTC | [MPL] Add CreateVapourDiffusionFEBEX | 11 March 2021, 09:41:45 UTC |
841ed20 | Wenqing Wang | 05 March 2021, 16:57:23 UTC | [MPL] Added VapourDiffusionFEBEX | 11 March 2021, 09:41:45 UTC |
f989cda | Lars Bilke | 11 March 2021, 08:33:46 UTC | Revert "[cpm] Add Boost as header-only." This reverts commit 707e3aa05823a4eb40e1efeff3e6b1995bdb1a81. | 11 March 2021, 08:33:46 UTC |
fc966cb | Lars Bilke | 10 March 2021, 19:22:04 UTC | Merge branch 'ReplaceBoostOptional' into 'master' Replace boost::optional with std::optional See merge request ogs/ogs!3502 | 10 March 2021, 19:22:04 UTC |
fa29bc7 | Dmitry Yu. Naumov | 10 March 2021, 13:36:00 UTC | Merge branch 'UpdateRMQuasiNewtonCtest' into 'master' [T/RM] Update reference. RHS includes stresses. See merge request ogs/ogs!3503 | 10 March 2021, 13:36:00 UTC |
3e170d6 | Dmitri Naumov | 10 March 2021, 10:05:23 UTC | [T/RM] Update reference. Rhs includes stresses. In 6fceafaed "[PL/RM] Use initial stress in assemble()." the rhs vector was changed, now including also stress related parts, and not only the gravitational forces. This changes only the NodalForces output, everything else is exactly same as before. | 10 March 2021, 12:34:28 UTC |
a7939a9 | Dmitri Naumov | 10 March 2021, 08:34:08 UTC | [PL] Add missing <string> include in create*(). | 10 March 2021, 08:34:57 UTC |
611c0af | Dmitri Naumov | 09 March 2021, 22:07:02 UTC | Replace optional references with pointers. Optional references are not allowed by std. Replacing with semantically equivalent pointer. | 10 March 2021, 08:34:57 UTC |
09080cf | Dmitri Naumov | 09 March 2021, 22:05:24 UTC | Use std::optional specific functions and helpers. boost::none -> std::nullopt boost::make_optional -> std::make_optional boost::optional<T>::get() -> std::optional<T>::value() | 10 March 2021, 08:34:57 UTC |
363cf6d | Dmitri Naumov | 09 March 2021, 22:33:50 UTC | Replace <boost/optional*> includes with <optional> | 10 March 2021, 08:34:37 UTC |
39469da | Dmitri Naumov | 09 March 2021, 21:43:06 UTC | Use std::optional replacing boost::optional. | 09 March 2021, 22:11:46 UTC |
72d80ab | Lars Bilke | 09 March 2021, 21:20:45 UTC | Merge branch 'cpm-fixes' into 'master' [cpm] Boost header only and skip formatting targets See merge request ogs/ogs!3501 | 09 March 2021, 21:20:45 UTC |
707e3aa | Lars Bilke | 09 March 2021, 20:25:13 UTC | [cpm] Add Boost as header-only. | 09 March 2021, 20:25:13 UTC |
e2971c9 | Lars Bilke | 09 March 2021, 20:24:48 UTC | [CMake] Disable formatting targets when formatters not found. | 09 March 2021, 20:24:48 UTC |
2958a5a | Lars Bilke | 09 March 2021, 19:59:36 UTC | Merge branch 'ReaddCleanCoverageTarget' into 'master' [CMake] Added clean_coverage target. See merge request ogs/ogs!3499 | 09 March 2021, 19:59:36 UTC |
0323857 | Lars Bilke | 09 March 2021, 19:57:07 UTC | Merge branch 'fix-shapelib' into 'master' [cpm] Fixed shapelib used from system See merge request ogs/ogs!3500 | 09 March 2021, 19:57:07 UTC |
670c6ae | Lars Bilke | 09 March 2021, 19:17:41 UTC | [cpm] Fixed shapelib used from system. | 09 March 2021, 19:17:41 UTC |
b1fec71 | Dmitry Yu. Naumov | 09 March 2021, 14:57:51 UTC | Merge branch 'CIFixTolerancesRMLiakopoulosQN' into 'master' [T/RM] Relax tolerances for failing CI job. See merge request ogs/ogs!3497 | 09 March 2021, 14:57:51 UTC |
2337827 | Lars Bilke | 12 February 2019, 08:09:25 UTC | [CMake] Added clean_coverage target. | 09 March 2021, 14:37:59 UTC |
c449fe1 | Dmitri Naumov | 09 March 2021, 13:48:03 UTC | [T/RM] Relax tolerances for failing CI job. win | 09 March 2021, 13:48:03 UTC |
eb24866 | Lars Bilke | 09 March 2021, 13:13:04 UTC | Merge branch 'format' into 'master' Clang and CMake Format preparation See merge request ogs/ogs!3496 | 09 March 2021, 13:13:04 UTC |
22144d0 | Lars Bilke | 09 March 2021, 12:14:37 UTC | [web] Added docs on cmake-format. | 09 March 2021, 12:14:37 UTC |
38f6285 | Lars Bilke | 09 March 2021, 12:00:32 UTC | [cmake] Preserve comment formating. | 09 March 2021, 12:02:20 UTC |
7a5e745 | Lars Bilke | 09 March 2021, 09:09:51 UTC | [cmake-format] Added config file. | 09 March 2021, 12:02:20 UTC |
2fea938 | Lars Bilke | 09 March 2021, 08:48:02 UTC | [clang-format] Ignore directories. | 09 March 2021, 12:02:19 UTC |
ddde0cf | Lars Bilke | 09 March 2021, 08:47:30 UTC | Added Format.cmake | 09 March 2021, 12:02:19 UTC |
ee07571 | Dmitry Yu. Naumov | 09 March 2021, 11:53:26 UTC | Merge branch 'CIFixTolerancesRMLiakopoulosQN' into 'master' [T/RM] Relax tolerances for failing CI job. See merge request ogs/ogs!3495 | 09 March 2021, 11:53:26 UTC |
f8eb3fa | Dmitri Naumov | 09 March 2021, 11:17:46 UTC | [T/RM] Relax tolerances for failing CI job. frontend | 09 March 2021, 11:17:46 UTC |
5907ba7 | Dmitry Yu. Naumov | 09 March 2021, 10:41:21 UTC | Merge branch 'RMFixesAndCleanups' into 'master' RM fixes and cleanups See merge request ogs/ogs!3477 | 09 March 2021, 10:41:21 UTC |
9816d02 | Dmitri Naumov | 08 March 2021, 14:34:27 UTC | [PL/RM] Fix eps_m computation in initialization. From the equations we have eps = eps_{m} + eps_{sw}, with eps_{sw} = -C_el^{-1} sigma_{sw}. All other places are using correct sign. | 09 March 2021, 09:17:26 UTC |
eacfb89 | Dmitri Naumov | 08 March 2021, 13:34:28 UTC | [PL/RM] Assemble. Compute p_SR before usage in rho solid_grain_pressure used in some density models was not set and caused an access error in the ExponentialProperty. | 09 March 2021, 09:17:26 UTC |
84bb557 | Dmitri Naumov | 22 February 2021, 17:04:40 UTC | [T/RM] Add liakopoulos test using assemble(). Using central differences for Jacobian computation. Still the HydraulicFlow and Nodal forces are not correct and don't include the 'M \dot{x} + K x' part. | 09 March 2021, 09:17:26 UTC |
4712e90 | Dmitri Naumov | 01 March 2021, 12:20:03 UTC | [T/RM] Move Liakopoulos diff config into project. | 09 March 2021, 09:17:26 UTC |
6fceafa | Dmitri Naumov | 22 February 2021, 17:03:43 UTC | [PL/RM] Use initial stress in assemble(). | 09 March 2021, 09:17:26 UTC |
c103065 | Dmitri Naumov | 21 February 2021, 20:35:30 UTC | [PL/RM] Fix error in mechanical strain computation Only happened in the assemble function, which does not have a ctest with swelling. | 09 March 2021, 09:17:26 UTC |
019f776 | Dmitri Naumov | 21 February 2021, 20:34:29 UTC | [PL/RM] Reuse p_FR computation in asm w/ Jacobian. | 09 March 2021, 09:17:26 UTC |
480f6b8 | Dmitri Naumov | 01 March 2021, 15:25:50 UTC | [PL/RM] Remove incorrect comment in assemble(). | 09 March 2021, 09:17:26 UTC |
93fe62d | Lars Bilke | 09 March 2021, 08:43:58 UTC | Update Dependencies.cmake (follow-up on !3494) | 09 March 2021, 08:43:58 UTC |
6dc675f | Lars Bilke | 08 March 2021, 20:23:13 UTC | Merge branch 'more-cpm' into 'master' More Conan packages moved to CPM (2nd try) See merge request ogs/ogs!3494 | 08 March 2021, 20:23:13 UTC |
8a563f7 | Lars Bilke | 08 March 2021, 13:48:22 UTC | [cpm] Suppress tests from dependencies. | 08 March 2021, 19:43:09 UTC |
47efb43 | Lars Bilke | 08 March 2021, 13:08:39 UTC | [cmake] Cleanup. | 08 March 2021, 19:43:09 UTC |
7095bad | Lars Bilke | 24 February 2021, 08:56:19 UTC | [cpm] Update to 0.31.1 | 08 March 2021, 19:43:09 UTC |
a61d381 | Lars Bilke | 24 February 2021, 09:24:19 UTC | Fixed testrunner with mfront. | 08 March 2021, 19:43:09 UTC |
710adbb | Lars Bilke | 24 February 2021, 08:24:27 UTC | Added zlib as CPM package. | 08 March 2021, 19:43:09 UTC |
7c4c60d | Lars Bilke | 08 March 2021, 09:25:23 UTC | [cpm] Added EXCLUDE_FROM_ALL. | 08 March 2021, 19:43:09 UTC |
cb89dc6 | Lars Bilke | 23 February 2021, 14:23:00 UTC | [CMake] Renamed BUILD_TESTING to OGS_BUILD_TESTING. Does not interfere with CPM modules. | 08 March 2021, 19:43:09 UTC |
eadd377 | Lars Bilke | 23 February 2021, 09:51:53 UTC | [CMake] Flag -fext-numeric-literals is valid only for C++. | 08 March 2021, 19:43:09 UTC |
6a1ab25 | Lars Bilke | 23 February 2021, 09:13:00 UTC | [CMake] package target installs only ogs, no third-party. - Removed install COMPONENTs - Made ogs the default component name - Install only the default ogs component with CPack | 08 March 2021, 19:43:09 UTC |
21efc68 | Lars Bilke | 24 February 2021, 14:01:35 UTC | [cpm] Fix frontend. | 08 March 2021, 19:43:09 UTC |
f13830d | Dmitry Yu. Naumov | 08 March 2021, 15:04:34 UTC | Merge branch 'web-additions' into 'master' Some web doc additions See merge request ogs/ogs!3493 | 08 March 2021, 15:04:34 UTC |
78d85f4 | Dmitry Yu. Naumov | 08 March 2021, 14:16:29 UTC | Merge branch 'Gmsh2OgsExtractBoundary' into 'master' GMSH2OGS; extract boundary meshes See merge request ogs/ogs!3482 | 08 March 2021, 14:16:29 UTC |
7b09b6d | Lars Bilke | 24 February 2021, 11:12:05 UTC | [cpm] Fixed hdf5 found on system. | 08 March 2021, 13:08:47 UTC |
2b76136 | Lars Bilke | 08 March 2021, 13:03:44 UTC | [web] Fixed singularity docs. Thanks to Shuang for reporting. | 08 March 2021, 13:03:44 UTC |
63005e5 | Dmitri Naumov | 04 March 2021, 08:52:46 UTC | [T/App/U] Add GMSH2OGS snakemake ctest. Testing conversion of the gmsh file removing the line elements from the boundary and extracting them as additional boundary files. | 08 March 2021, 12:21:22 UTC |
dd88ec0 | Dmitri Naumov | 06 March 2021, 11:29:10 UTC | [web] GMSH2OGS documentation for -e and -b. | 08 March 2021, 12:21:22 UTC |
2453d1e | Dmitri Naumov | 03 March 2021, 17:34:40 UTC | [T/MeL] Reference files for GMSH2OGS boundaries. | 08 March 2021, 12:21:22 UTC |
7f22968 | Dmitri Naumov | 04 March 2021, 16:14:17 UTC | [GL] Grid; Allow zero tolerance to be used. Specifying strictly smaller criterion, does not allow eps=0 to be used. | 08 March 2021, 12:21:22 UTC |
77a0920 | Dmitri Naumov | 04 March 2021, 11:06:18 UTC | [App/U] Create bulk_node_ids/element_ids. Using exact matching. If the utility would be called gmsh2vtu, then this identification would be outsourced (identifySubdomains tool). Now the user expects proper OGS-usable boundary meshes to be generated. | 08 March 2021, 12:21:22 UTC |
d3d08bb | Lars Bilke | 23 February 2021, 07:50:06 UTC | Replaced Conan CVode module with CPM. | 08 March 2021, 12:17:06 UTC |
30ee303 | Lars Bilke | 23 February 2021, 07:22:56 UTC | Replaced LibXml2 Conan module with CPM. | 08 March 2021, 12:17:06 UTC |
e7d24af | Dmitri Naumov | 24 February 2021, 16:37:21 UTC | [App/U] GMSH2OGS can now extract line boundaries. Adding a new command line flag '-b'. With the flag being set, the line elements (same as those removed by the '-e' flag) are extracted as individual meshes. The new meshes are stored in files corresponding to the material ids. | 08 March 2021, 12:12:19 UTC |
66b9434 | Dmitri Naumov | 03 March 2021, 15:38:00 UTC | [MeL] Extract marking of unused nodes and deletion For external usage. | 08 March 2021, 12:12:19 UTC |
dd7f53a | Dmitri Naumov | 03 March 2021, 14:23:48 UTC | [App/U] Fix memory info message type and prefix. | 08 March 2021, 12:12:19 UTC |
42db96b | Lars Bilke | 22 February 2021, 14:17:06 UTC | Replaced hdf5 Conan module with CPM. | 08 March 2021, 11:31:53 UTC |
6ebfe9a | Lars Bilke | 22 February 2021, 13:09:17 UTC | Replaced Conan shapelib with CPM. Is enabled when OGS_BUILD_GUI=ON | 08 March 2021, 11:31:53 UTC |
dc29d29 | Lars Bilke | 22 February 2021, 09:43:08 UTC | Install Boost via CPM. | 08 March 2021, 11:31:52 UTC |
d93b2a6 | Dmitry Yu. Naumov | 08 March 2021, 10:42:12 UTC | Merge branch 'FixGrowingMemConsumption' into 'master' Fix growing mem consumption See merge request ogs/ogs!3492 | 08 March 2021, 10:42:12 UTC |
8d52068 | Lars Bilke | 08 March 2021, 08:16:25 UTC | [web] Added page on Snakemake workflow usage. | 08 March 2021, 08:37:48 UTC |
d88df1e | Lars Bilke | 08 March 2021, 08:15:36 UTC | [web] Added some notes on ccache usage. Thanks for Alireza for reporting! | 08 March 2021, 08:15:36 UTC |
7503abe | Thomas Fischer | 04 March 2021, 13:30:16 UTC | [PL/TimeLoop] Store the ids of xdot GlobalVector's. | 08 March 2021, 05:51:01 UTC |
6a569b4 | Thomas Fischer | 04 March 2021, 13:28:41 UTC | [NL/DOF] Rm getVector() method to avoid misuse. | 06 March 2021, 14:44:42 UTC |
0fe8217 | Thomas Fischer | 04 March 2021, 13:26:03 UTC | [NL/ODESolver/Newton] Store ids to reuse the xdot vectors. | 06 March 2021, 14:44:39 UTC |