3972847 | Dmitri Naumov | 09 June 2021, 09:37:23 UTC | Don't additionally link spdlog in every library. spdlog is linked "public" in BaseLib. Reason is the violation of odr for some globals defined in the spdlog library. ==1540297==ERROR: AddressSanitizer: odr-violation (0x7f5ea9c9d020): [1] size=40 'vtable for spdlog::spdlog_ex' _deps/spdlog-src/src/spdlog.cpp [2] size=40 'vtable for spdlog::spdlog_ex' _deps/spdlog-src/src/spdlog.cpp These globals were registered at these points: [1]: #0 0x5614686e0dfa in __asan_register_globals.part.0 (/home/naumov/w/ogs/d/bin/ogs+0x1bfdfa) #1 0x7f5e6cdbe7eb in asan.module_ctor (/home/naumov/w/ogs/d/bin/../lib/libMeshLib.so+0x17d37eb) [2]: #0 0x558bd62b6dfa in __asan_register_globals.part.0 (/home/naumov/w/ogs/d/bin/ogs+0x1bfdfa) #1 0x7f831c7e54ab in asan.module_ctor (/home/naumov/w/ogs/d/bin/../lib/libBaseLib.so+0x89a4ab) | 09 June 2021, 12:36:34 UTC |
fa9c332 | Dmitri Naumov | 31 May 2021, 14:36:03 UTC | [BL] Extend error messages for xml patches. | 09 June 2021, 12:36:34 UTC |
76a3050 | Thomas Fischer | 02 June 2021, 12:56:03 UTC | [PL/U/LocalDataInitializer] Clang format. | 09 June 2021, 12:36:34 UTC |
4159dc2 | Thomas Fischer | 17 May 2021, 08:55:21 UTC | [T/ComponentTransport] Use multiple meshes tag in prj file instead of geometry. | 09 June 2021, 12:36:34 UTC |
ca88a32 | Dmitri Naumov | 28 May 2021, 15:14:33 UTC | [MPL] clang-format; Sort includes. | 09 June 2021, 10:43:51 UTC |
1231de9 | Dmitri Naumov | 26 May 2021, 16:01:12 UTC | [ParL] Remove unnecessary data member and typedef. Data member is used only in constructor, no need to store it. | 09 June 2021, 10:43:51 UTC |
15a2ed9 | Dmitry Yu. Naumov | 07 June 2021, 10:16:13 UTC | Merge branch 'Stokes' into 'master' New Process: Stokes flow See merge request ogs/ogs!3617 | 07 June 2021, 10:16:13 UTC |
24d8bcc | renchao_lu | 30 May 2021, 16:43:54 UTC | [Docu] add parameter documentation. | 03 June 2021, 17:31:19 UTC |
28d0a4e | renchao_lu | 30 May 2021, 16:49:38 UTC | [T] add parallel plate test case. | 03 June 2021, 17:31:19 UTC |
f77eba8 | renchao_lu | 02 June 2021, 17:08:19 UTC | [PL/Stokes] add local assembler interface. | 03 June 2021, 17:31:19 UTC |
ca8ac88 | renchao_lu | 02 June 2021, 17:08:03 UTC | [PL/Stokes] add integration point data. | 03 June 2021, 17:31:19 UTC |
fc99003 | renchao_lu | 30 May 2021, 16:47:29 UTC | [PL/Stokes] add local assembler. | 03 June 2021, 17:31:19 UTC |
d34f8be | renchao_lu | 30 May 2021, 16:48:14 UTC | [PL/Stokes] add process member functions. | 03 June 2021, 17:31:19 UTC |
55b078c | renchao_lu | 30 May 2021, 16:46:36 UTC | [PL/Stokes] add process data. | 03 June 2021, 17:31:19 UTC |
3475b54 | renchao_lu | 30 May 2021, 16:45:50 UTC | [PL/Stokes] create Stokes flow process. | 03 June 2021, 17:31:19 UTC |
3d3bca7 | renchao_lu | 30 May 2021, 16:45:17 UTC | [CMake] include a Stokes process module. | 03 June 2021, 17:31:19 UTC |
a43db31 | Dmitry Yu. Naumov | 03 June 2021, 17:08:49 UTC | Merge branch 'RewritePolygonTreeInterfaces' into 'master' Refactor polygon tree interfaces. See merge request ogs/ogs!3634 | 03 June 2021, 17:08:49 UTC |
4b12ab4 | Dmitri Naumov | 19 May 2021, 09:21:04 UTC | [GL] Make class members private. Moving them from protected section. All of the access is now through public interface and these parts can be hidden. | 03 June 2021, 16:34:25 UTC |
69a7f3a | Dmitri Naumov | 19 May 2021, 09:19:32 UTC | [App/IO] Remove unnecessary if-condition. The following for-loop is not run anyway. | 03 June 2021, 16:34:25 UTC |
65b3aff | Thomas Fischer | 19 May 2021, 14:08:23 UTC | [A/IO/Gmsh] Constify methods of GMSHPolygonTree. | 03 June 2021, 16:34:25 UTC |
f6b03c8 | Dmitri Naumov | 18 May 2021, 21:15:21 UTC | [GL] Use for-range loops. Add iterator IF. | 03 June 2021, 16:34:25 UTC |
379b078 | Dmitri Naumov | 18 May 2021, 20:51:09 UTC | [GL] Remove unnecessary set function used once. | 03 June 2021, 16:34:25 UTC |
c9a92d1 | Dmitri Naumov | 18 May 2021, 19:23:40 UTC | [GL] Unify tree's polygon access. Replacing different two different access types, one through a getPolygon() member function, another through direct data member _node_polygon access. | 03 June 2021, 16:34:25 UTC |
c97479d | Dmitri Naumov | 18 May 2021, 18:14:32 UTC | [GL] Add parent node access. | 03 June 2021, 16:34:25 UTC |
81d347e | Dmitri Naumov | 18 May 2021, 18:02:38 UTC | [GL] Add SimplePolygonTree::isRoot query. | 03 June 2021, 16:34:25 UTC |
673f991 | Tom Fischer | 03 June 2021, 15:01:13 UTC | Merge branch 'saturation_dependent_thermal_conductivity' into 'master' [MPL] rename HeatConduction -> ThermalConductivity See merge request ogs/ogs!3651 | 03 June 2021, 15:01:13 UTC |
bf4e1cd | Jörg Buchwald | 01 June 2021, 13:17:27 UTC | rename HeatConduction -> ThermalConductivity | 03 June 2021, 10:21:49 UTC |
334069c | renchao.lu | 03 June 2021, 08:11:42 UTC | Merge branch 'ExchangeReactionsEquil' into 'master' [CL] Exchange reactions feature to ChemistryLib See merge request ogs/ogs!3648 | 03 June 2021, 08:11:42 UTC |
8b35b21 | Dmitry Yu. Naumov | 03 June 2021, 08:09:29 UTC | Merge branch 'MFront_Update' into 'master' Updating MCAS UBI models for new MFront version See merge request ogs/ogs!3653 | 03 June 2021, 08:09:29 UTC |
1952481 | Jaime Garibay | 27 May 2021, 15:25:38 UTC | [T/docs] Added test and documentation | 03 June 2021, 06:25:00 UTC |
fb6a558 | Jaime Garibay | 21 May 2021, 14:25:30 UTC | [CL] New feature to enable exchange reactions This feature adds the capability to model exchange reactions using the Phreeqc solver | 03 June 2021, 06:24:29 UTC |
d49bec2 | Dmitry Yu. Naumov | 02 June 2021, 18:51:38 UTC | Merge branch 'fix_HM' into 'master' Fixed a MFront related bug in HM See merge request ogs/ogs!3652 | 02 June 2021, 18:51:38 UTC |
5d64c15 | Dmitry Yu. Naumov | 02 June 2021, 16:03:32 UTC | Merge branch 'rename_prj' into 'master' [THM] rename point heat source project/geometry files See merge request ogs/ogs!3650 | 02 June 2021, 16:03:32 UTC |
96974e7 | Jörg Buchwald | 01 June 2021, 12:53:26 UTC | rename point heat source project/geometry files | 02 June 2021, 14:42:51 UTC |
2f91ac8 | Wenqing Wang | 02 June 2021, 09:46:00 UTC | [HM/LocalAssembler] Pass C_el to getBulkModulus | 02 June 2021, 14:32:27 UTC |
a7508d5 | Wenqing Wang | 02 June 2021, 09:45:01 UTC | [HM/IntegrationPointData] Added a member of computeElasticTangentStiffness | 02 June 2021, 14:32:27 UTC |
7b69a4a | Dmitry Yu. Naumov | 02 June 2021, 14:28:31 UTC | Merge branch 'TH2M_refactorings' into 'master' TH2M refactorings See merge request ogs/ogs!3649 | 02 June 2021, 14:28:31 UTC |
c637662 | tnagel | 02 June 2021, 14:27:04 UTC | Changed MCAS UBI versions to new TFEL syntax. | 02 June 2021, 14:27:04 UTC |
093a1f8 | Dmitri Naumov | 01 June 2021, 12:38:29 UTC | [T/TH2M] Remove unused MPL properties. | 02 June 2021, 12:47:02 UTC |
734fbd8 | Dmitri Naumov | 20 May 2021, 12:01:57 UTC | [PL/TH2M] Remove unused variables. | 02 June 2021, 12:47:02 UTC |
ec74863 | Dmitri Naumov | 28 April 2021, 21:40:06 UTC | [PL/TH2M/PTM] Pass variables to update function. while rewriting the "get" function. This is the second step to separate behaviour from state. | 02 June 2021, 12:47:02 UTC |
fb69fff | Dmitri Naumov | 28 April 2021, 20:31:56 UTC | [PL/THM2] Extract constitutive variables. First step to separte the behaviour from state. | 02 June 2021, 12:47:02 UTC |
aad7e13 | Dmitri Naumov | 28 April 2021, 20:11:52 UTC | [PL/TH2M] Rename PhaseTransitionModel base class. Plural is incorrect, just a model. | 02 June 2021, 12:47:02 UTC |
07e920f | Dmitri Naumov | 31 May 2021, 21:02:30 UTC | [PL/TH2M] Introduce types for local matrix/vector. Saves a little bit of typing. | 02 June 2021, 12:47:02 UTC |
51806bc | Dmitry Yu. Naumov | 02 June 2021, 12:23:16 UTC | [CL] Add missing <string> include. | 02 June 2021, 12:23:16 UTC |
f2576d9 | Lars Bilke | 31 May 2021, 06:20:56 UTC | [T] Relax tolerances in Parallel_2D_StaggeredScheme_... ...ComponentTransport_TracerSimulation. | 02 June 2021, 09:26:33 UTC |
7090fe6 | Tobias Meisel | 01 June 2021, 13:55:46 UTC | [MeL/IO] : Each XDMF Test has unique output file | 01 June 2021, 21:12:48 UTC |
fc80391 | Lars Bilke | 01 June 2021, 18:19:50 UTC | Merge branch 'ShpMessage' into 'master' [FileIO] Info on shp-polygons consisting of multiple parts See merge request ogs/ogs!3645 | 01 June 2021, 18:19:50 UTC |
7d545b6 | rinkk | 28 May 2021, 15:55:38 UTC | [FileIO] Info on shp-polygons consisting of multiple parts | 01 June 2021, 15:01:58 UTC |
d7f3e5f | Dmitry Yu. Naumov | 01 June 2021, 12:18:06 UTC | Merge branch 'GeometryToGmshGeoTool' into 'master' Gmsh: Command line tool to create geo-files; fix mem leak See merge request ogs/ogs!3644 | 01 June 2021, 12:18:06 UTC |
5babfd7 | Thomas Fischer | 01 June 2021, 08:50:17 UTC | [A/U/MGT] Test geo file creation for homogeneous meshing. | 01 June 2021, 08:50:17 UTC |
ddafba0 | Thomas Fischer | 31 May 2021, 13:20:23 UTC | [web] Documenting geometryToGmshGeo. | 01 June 2021, 08:33:56 UTC |
db77fcc | Thomas Fischer | 31 May 2021, 07:23:06 UTC | [A/U/MGT] geometryToGmshGeo: handle multiple geometries. | 01 June 2021, 08:33:56 UTC |
715fe79 | Thomas Fischer | 21 May 2021, 11:25:11 UTC | [A/IO/Gmsh] Fix memory leak. The PolygonWithSegmentMarker weren't properly cleaned up. Now, the newly created object are given to the GEOObject manager class that cleans up all data. | 01 June 2021, 08:33:56 UTC |
099feba | Thomas Fischer | 21 May 2021, 09:49:58 UTC | [scripts] Enable arguments for tester programm. Credits to Lars. | 01 June 2021, 08:33:56 UTC |
27e4d7b | Thomas Fischer | 20 May 2021, 15:36:56 UTC | [A/U/MGT] Test for geometryToGmshGeo tool. | 01 June 2021, 08:33:56 UTC |
cede488 | Thomas Fischer | 20 May 2021, 08:00:49 UTC | [A/U/MGT] Tool to create Gmsh geo files from gml format. | 01 June 2021, 08:33:56 UTC |
42ef040 | Thomas Fischer | 20 May 2021, 07:59:54 UTC | [A/IO/Gmsh] Exit when required data is missing. | 31 May 2021, 04:21:07 UTC |
e5fbe5f | Thomas Fischer | 19 May 2021, 14:07:31 UTC | [A/IO/Gmsh] Don't cleanup _node_polygon. The node polygon is managed externally. | 31 May 2021, 04:21:07 UTC |
760886f | Dmitri Naumov | 28 May 2021, 21:04:45 UTC | [MPL] Pass arguments by const ref. cppcheck. | 29 May 2021, 12:47:50 UTC |
da6f43c | Lars Bilke | 28 May 2021, 20:33:14 UTC | [ci] Fixed image selection. | 28 May 2021, 20:33:14 UTC |
bbe23b3 | Dmitry Yu. Naumov | 28 May 2021, 20:15:59 UTC | Merge branch 'MplFunctionProperty' into 'master' MPL Function type property using exprtk. Closes #3153 See merge request ogs/ogs!3640 | 28 May 2021, 20:15:59 UTC |
2be63eb | Lars Bilke | 28 May 2021, 18:30:43 UTC | [ci] Archive artifacts on failure too. | 28 May 2021, 18:30:43 UTC |
2ee4c6a | Dmitry Yu. Naumov | 28 May 2021, 17:47:14 UTC | Merge branch 'ci-images' into 'master' [ci] Improvements in Docker image selection See merge request ogs/ogs!3635 | 28 May 2021, 17:47:14 UTC |
927404a | Lars Bilke | 28 May 2021, 15:45:06 UTC | Merge branch 'BinaryToPVTUConversionTool' into 'master' Tool to convert binary parallel mesh format to PVTU format. See merge request ogs/ogs!3629 | 28 May 2021, 15:45:06 UTC |
43f2aac | Dmitri Naumov | 26 May 2021, 16:00:02 UTC | [MPL] Function-type Property using exprtk. A generalized property type for (almost) arbitrary functions. Based on the exprtk library also used in the Function-type parameters. In this initial implementation all *scalar* variables from the variable array passed for the value and derivative evaluation can be used. Return values are either scalar, 2- or 3-vectors, and 2x2- or 3x3 matrices. The evaluation is somewhat slower than the dedicated implementation; in the case of component transport process a bilinear property was replaced by exactly the same function-type property and the total run-time for the ctest has increased by around 6%. | 28 May 2021, 15:20:45 UTC |
dbcb15f | Dmitri Naumov | 26 May 2021, 09:58:27 UTC | [T/CT] Use Function type property for testing. Replaces the Linear type property with a general function type expression with derivatives. | 28 May 2021, 15:20:45 UTC |
e41b471 | Thomas Fischer | 27 May 2021, 14:43:14 UTC | [T/Utils/binaryToVTU] Add test for tool. | 28 May 2021, 12:29:24 UTC |
8a32473 | Thomas Fischer | 25 May 2021, 06:00:15 UTC | [T/xdmf] Fix spelling. | 28 May 2021, 12:29:24 UTC |
facacbf | Thomas Fischer | 21 May 2021, 20:00:36 UTC | [A/U/ModelPreparation] Activate tool only if OGS_USE_MPI is set. | 28 May 2021, 12:29:23 UTC |
0e1f97a | Thomas Fischer | 19 May 2021, 12:42:20 UTC | [A/U/ModelPrep] Tool that reads mesh from parallel binary format and writes it as pvtu. | 28 May 2021, 12:29:23 UTC |
e9ed281 | Thomas Fischer | 19 May 2021, 12:40:24 UTC | [MeL/IO] Add file name to info message. | 28 May 2021, 12:19:32 UTC |
6ff1690 | Thomas Fischer | 19 May 2021, 12:38:41 UTC | [MeL/IO] Use MPI_COMM_WORLD instead of PETSC_COMM_WORLD. This change makes it possible to use MPI related mesh IO functionality without initializing PETSc. | 28 May 2021, 12:19:32 UTC |
1c97e42 | Lars Bilke | 25 May 2021, 07:18:35 UTC | [ci] Streamlined Docker image selection logic. | 28 May 2021, 11:36:18 UTC |
18f3516 | Dmitry Yu. Naumov | 28 May 2021, 11:27:26 UTC | Merge branch 'DataExplorerFixWarnings' into 'master' DataExplorer: fix Qt deprecated warnings See merge request ogs/ogs!3643 | 28 May 2021, 11:27:26 UTC |
bbc4e96 | Dmitry Yu. Naumov | 28 May 2021, 08:37:19 UTC | Merge branch 'ctest-output' into 'master' [ctest] Fixing log output See merge request ogs/ogs!3639 | 28 May 2021, 08:37:19 UTC |
fda48cd | Thomas Fischer | 28 May 2021, 06:27:13 UTC | [A/DE] Fix Qt warning: 'QFlags' is deprecated. | 28 May 2021, 06:27:13 UTC |
232469c | Thomas Fischer | 28 May 2021, 06:26:29 UTC | [A/DE] Fix Qt warning: 'split' is deprecated. | 28 May 2021, 06:26:29 UTC |
cc050e8 | Tom Fischer | 28 May 2021, 05:14:47 UTC | Merge branch 'DisableNonMPIToolsInMPIBuild' into 'master' Disable building non MPI tools in MPI / PETSc build See merge request ogs/ogs!3638 | 28 May 2021, 05:14:47 UTC |
f9ea88b | Lars Bilke | 27 May 2021, 13:07:21 UTC | [ci] Cleanup ctest log files for passed tests. | 27 May 2021, 14:04:53 UTC |
730335a | Lars Bilke | 26 May 2021, 21:35:35 UTC | [ci] Archive logs. | 27 May 2021, 13:07:17 UTC |
9d1d560 | Lars Bilke | 26 May 2021, 21:29:24 UTC | Revert "Use xsltproc to transform ctest error output (win)." This reverts commit 033fa1ec17c611d2fb3dd638b9898cbf26345d64. | 27 May 2021, 13:07:17 UTC |
6f6fc4f | Lars Bilke | 26 May 2021, 21:28:34 UTC | Revert "Use xsltproc to transform ctest error output." This reverts commit c3b4e85b26ae14baa6c10e213d00fb00acc210e5. | 27 May 2021, 13:07:17 UTC |
bef6e6a | Lars Bilke | 26 May 2021, 21:12:49 UTC | [ctest] Log for OgsTest(). | 27 May 2021, 13:07:17 UTC |
fb4792f | Lars Bilke | 26 May 2021, 20:49:15 UTC | [ctest] Log for MeshTest(). | 27 May 2021, 13:07:16 UTC |
741c368 | Lars Bilke | 26 May 2021, 20:44:44 UTC | [ctest] Better output. - ctests added with AddTest() write log files to build-dir/logs/ - when running ctest --output-on-failure: - test wrapper do not output log to console, only log file - test tester output to console as well | 27 May 2021, 13:07:16 UTC |
20d18b4 | Lars Bilke | 27 May 2021, 10:17:41 UTC | [cmake] Return early in tools CMakeLists, avoids indentation. | 27 May 2021, 10:17:41 UTC |
3b5cf62 | Tom Fischer | 27 May 2021, 10:10:46 UTC | Merge branch 'MplEnumStringConversions' into 'master' MPL enum string conversions See merge request ogs/ogs!3641 | 27 May 2021, 10:10:46 UTC |
43b7b32 | Dmitri Naumov | 27 May 2021, 08:41:16 UTC | [AppL] Add missing include. | 27 May 2021, 08:59:09 UTC |
5ff226d | Dmitri Naumov | 27 May 2021, 08:21:17 UTC | [MPL] Fix missing includes. | 27 May 2021, 08:59:09 UTC |
52f0661 | Dmitri Naumov | 27 May 2021, 08:17:04 UTC | [MPL] Move implementation in own TU. | 27 May 2021, 08:59:09 UTC |
6a04320 | Dmitri Naumov | 27 May 2021, 08:12:19 UTC | [MPL] Rewrite string to PropertyType conversion. | 27 May 2021, 08:12:19 UTC |
1669465 | Dmitri Naumov | 27 May 2021, 08:11:40 UTC | [MPL] Rewrite string to Variable conversion. | 27 May 2021, 08:11:40 UTC |
1382ea0 | Dmitri Naumov | 26 May 2021, 22:13:30 UTC | [MPL] Variable enum to string conversion. | 27 May 2021, 08:11:02 UTC |
86a8de3 | Lars Bilke | 26 May 2021, 18:55:41 UTC | [T] Fix snakemake_ExtractBoundary dependencies. | 27 May 2021, 06:19:18 UTC |
ca5825e | Thomas Fischer | 26 May 2021, 15:09:38 UTC | [A/U/SimpleMeshCreation] Disable build of non-MPI tools in MPI config. | 27 May 2021, 06:19:18 UTC |
de5cc63 | Thomas Fischer | 26 May 2021, 14:48:45 UTC | [A/U/PostProcessing] Disable build of non-MPI tools in MPI config. | 27 May 2021, 06:19:18 UTC |
31ff9b5 | Thomas Fischer | 26 May 2021, 14:48:18 UTC | [A/U/ModelPreparation] Disable build of non-MPI tools in MPI config. | 26 May 2021, 19:28:13 UTC |
1758eec | Thomas Fischer | 26 May 2021, 14:38:51 UTC | [A/U/MGT] Disable build of non-MPI tools in MPI config. | 26 May 2021, 19:28:13 UTC |
b2ad827 | Thomas Fischer | 26 May 2021, 14:38:31 UTC | [A/U/MeshEdit] Disable build of non-MPI tools in MPI config. | 26 May 2021, 19:28:12 UTC |