https://github.com/GPflow/GPflow

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Revision Author Date Message Commit Date
a806b62 Initiate porting from testing environment. 01 January 2018, 16:52 UTC
140a53c Merge pull request #592 from GPflow/awav/pandas-pretty-printing Pandas Model/Parameters printing. 14 December 2017, 09:49 UTC
d0937b2 Merge branch 'master' into awav/pandas-pretty-printing 13 December 2017, 20:38 UTC
3c78e4f Merge pull request #596 from GPflow/remove_likelihood_checks removed _check_targets 11 December 2017, 01:28 UTC
01d0a7a Update notebooks from master branch. 10 December 2017, 23:55 UTC
b6ff40e removed _check_targets 10 December 2017, 22:16 UTC
158af0e Re-run notebooks with new printing. 08 December 2017, 22:39 UTC
186419c Cover pandas printing for Parameter, DataHolder and Parameterized instances. 08 December 2017, 22:08 UTC
6582f41 Merge pull request #586 from GPflow/awav/replace-tf-float-and-int Standardize float type 08 December 2017, 02:39 UTC
cfa59ce Merge branch 'master' into awav/replace-tf-float-and-int 08 December 2017, 02:29 UTC
e67b457 Tests for deprecation messages. 07 December 2017, 21:41 UTC
81c4b55 Use new pandas tables in notebooks. 07 December 2017, 20:28 UTC
e923230 Merge pull request #589 from GPflow/awav/documentation Documentation fixes. 07 December 2017, 16:55 UTC
22f450d Merge branch 'master' into awav/documentation 07 December 2017, 00:00 UTC
0ef8e3d Remove redundant destination string for comparison. 06 December 2017, 23:28 UTC
f413633 Parameter representation returns str type. 06 December 2017, 23:17 UTC
e153901 Pretty printing using pandas structure. 06 December 2017, 16:49 UTC
8a1376b Merge master into branch. Resolve conflicts. 05 December 2017, 14:29 UTC
942fe22 Rename np_float[int] to float[int]_type. 05 December 2017, 00:19 UTC
f70e2dc Merge branch 'master' into awav/replace-tf-float-and-int 04 December 2017, 19:33 UTC
c3d5f28 Improve nomenclature (issue #504) (#570) * improve kernel nomenclature #504 * add deprecation errors for renames * give uncertain_conditional explicit kwargs as well * conditional(..., whiten=...) -> conditional(..., white=...) * updates to regression notebook 04 December 2017, 11:54 UTC
c951c3a Fixes for notebooks. Renaming feat => feature. 04 December 2017, 09:41 UTC
e5b8cfe Small spelling 02 December 2017, 10:34 UTC
79e0815 Clarify variables naming at assign Parameter's method. 01 December 2017, 10:54 UTC
399e732 Normalize tf floats and ints. 01 December 2017, 00:45 UTC
cf629d5 Merge pull request #581 from GPflow/readme-py3 Mention Python 3 in README.md 29 November 2017, 00:08 UTC
0656d41 Merge branch 'master' into readme-py3 28 November 2017, 11:07 UTC
5b60cb4 Update README.md 28 November 2017, 11:07 UTC
c98cd3c updates to regression notebook (#584) 28 November 2017, 10:17 UTC
0588a3c Merge pull request #583 from GPflow/awav/improve-uncertain-conditional-test Improve uncertain conditional test 28 November 2017, 08:38 UTC
27ef3ce Fix spelling error. 28 November 2017, 08:33 UTC
04d5d95 Merge branch 'master' into awav/improve-uncertain-conditional-test 27 November 2017, 22:30 UTC
52ecfab [#577] Improvement to improvement of tests in uncertain conditional test. 27 November 2017, 22:27 UTC
4a58b6e Mention Python 3 in README.md 27 November 2017, 19:54 UTC
d86af28 Merge pull request #573 from GPflow/chain_transform Chain transform helper 27 November 2017, 14:36 UTC
a79d97f reverting test edits 27 November 2017, 14:06 UTC
8f2f491 Merge branch 'master' into chain_transform 27 November 2017, 14:00 UTC
3df130f Merge pull request #580 from GPflow/awav/minibatch-iterator Exclusive behaviour for Minibatch 26 November 2017, 20:15 UTC
559c6de Merge branch 'master' into awav/minibatch-iterator 26 November 2017, 15:54 UTC
4770c34 Merge pull request #579 from GPflow/awav/kernel-quadrature-speedup-test Speed up some ekernels test on 40%. 26 November 2017, 15:46 UTC
25520f4 Fix test. Minibatch must not be re-initialized at each iteration, but keep reading and shuffling data, so that previous values are different. 26 November 2017, 12:54 UTC
706cb48 Exclude minibatch iterators from auto-initialization. 26 November 2017, 12:32 UTC
ece68fb Remove unnecessary 'session_context' from top of the 'test_exp_quadrature_diag' test. 26 November 2017, 12:08 UTC
75435e3 Speed up some ekernels test on 40%. 26 November 2017, 09:40 UTC
28070e7 10x speed up likelihood test. (#576) 25 November 2017, 12:52 UTC
30120a1 Address issues #568, #561 (#575) * Add a bunch of test for Parameter and DataHolder. Minibatch seed can be changed after cleaning or in defer_build. * Add dataholder tests. * Add failure creation tests to data holders. * Shape and dtype for dataholders work for external tensors. * According fix in dataholder test. * Change travis file. * Experiments with travis. * Improvements in Parameterized tests. * Exclude external optimizer from coverage report. * Improvements in optimizer tests. * Indent functions in optimizer's tests. * Increase coverage in Parameterized. * Increase codecov for Parameterized. * Developing test coverage further. * Tests Parameterized feeds. * Call parameter size in tests. * 100% for ParamList. * Minibatch tests. * Increase coverage for Minibatch. * Setup.py clean up. Stick to 1.4 tensorflow version. Remove backwards for py2.7. * Increase coverage for Parameters. * Increase coverage for Parameters build check. * Core tests for TensorConverter. * Code coverage targets. * Change initialization policy at decors and trainers. * Check initialization status of variable using tf.is_variable_initialized tensor. * [#568] Improve initialization status checking performance. * [#568, #561] Test for Dataset iterators is not possible. * Increase coverage for Parameter. method was added, therefore required some tests. method inconsistently handled session inputs. * Added more tests for Parameter object covering cases when tensor is trainable and parameter is not. Also added test for Parameter string conversion. 25 November 2017, 12:33 UTC
6211222 Improve docstring. 24 November 2017, 17:32 UTC
6a5e6a0 fix tests 24 November 2017, 16:32 UTC
1a886fc Merge branch 'chain_transform' of github.com:GPflow/GPflow into chain_transform 24 November 2017, 14:20 UTC
f4559a3 Some simplifications for DiagMatrix class 24 November 2017, 14:18 UTC
13e16a6 minor cleanup 24 November 2017, 11:57 UTC
b313409 adding hosekeeping for chaining transforms and simple test 24 November 2017, 11:10 UTC
cef3876 merge in test)_transforms 24 November 2017, 10:55 UTC
2cb1a4a add test 23 November 2017, 21:24 UTC
f42cab0 add positiveRescale transform combination 23 November 2017, 18:18 UTC
01c2aa3 Chain transform (#541) * Chain transform * fix abstract interface ITransform * doc changes * fix Rescale jacobian * enable chaining of transforms using __call__ * tests for transformation chaining * add tests for code coverage * add docstrings * add docstring to ITransform 23 November 2017, 18:10 UTC
a429265 add docstring to ITransform 23 November 2017, 17:45 UTC
17f736a add docstrings 23 November 2017, 17:25 UTC
8153ffa add tests for code coverage 23 November 2017, 16:46 UTC
a3aa873 Merge branch 'master' into chain_transform 23 November 2017, 16:23 UTC
076ae06 Moment matching for uncertain conditional (#536) * Add Features base classes * Convert SGPR and SVGP models to use InducingFeatures (including backwards compatibility) * Fix tests * Added Multiscale feature. To show the generality of the inter-domain code. * Fixed py2 metaclass issue, as per John Bradshaw's suggestion. * Improve docstrings, register Multiscale feature * Change SGPR models to determine feature length dynamically [but feature.__len__() still needs to be made dynamic as well!] * Bits and pieces missed in the merge. * Add features to __init__. * Fixed incorrect parameter dtype assignment on compile. * kernel expectations for inducing point features * Added `uncertain_conditional` (not run, untested). * Uncertain conditional, only for whitened case * Uncertain conditional tested, only whitened case * Uncertain conditional * Unittests for uncertain conditional * Update test_uncertain_conditional.py Fix tests that wouldn't have run due to being hidden in a generator expression * Uncertain conditional without full output covariance * Added quadrature tests * Two bugfixs. - Static assignment of len(feature) - Upper bound mixin referred to Z. * Fixed bugs in multiscale & added features. * Added tests for `Multiscale` inducing features. * Moved uncertain conditional test to new testing directory. * Updated `RELEASE.md`, and small changes for tests. * add test for len(feature) * Deprecation property for `Z`, relative imports, improved test. * `SGPMC` has inducing features now + better docstrings. * Fixed `SGPMC`. * Add a bunch of test for Parameter and DataHolder. Minibatch seed can be changed after cleaning or in defer_build. * Add dataholder tests. * Add failure creation tests to data holders. * Shape and dtype for dataholders work for external tensors. * According fix in dataholder test. * Change travis file. * Experiments with travis. * Improvements in Parameterized tests. * Exclude external optimizer from coverage report. * Improvements in optimizer tests. * Indent functions in optimizer's tests. * Increase coverage in Parameterized. * Increase codecov for Parameterized. * Developing test coverage further. * Tests Parameterized feeds. * Call parameter size in tests. * 100% for ParamList. * Minibatch tests. * Increase coverage for Minibatch. * Setup.py clean up. Stick to 1.4 tensorflow version. Remove backwards for py2.7. * Increase coverage for Parameters. * Increase coverage for Parameters build check. * Core tests for TensorConverter. * Code coverage targets. * `feat` now `feature` + other changes. * Update _version.py * Fix small import errors. * change exception * Fix broken unit tests * Add no cover pragma and remove unused functions 23 November 2017, 16:22 UTC
edbc289 tests for transformation chaining 23 November 2017, 16:11 UTC
d4a6251 enable chaining of transforms using __call__ 23 November 2017, 16:10 UTC
bec13b9 fix Rescale jacobian 23 November 2017, 16:10 UTC
0cf8024 Fixed SVGP minibatch issue, plus regression test. 23 November 2017, 14:23 UTC
8b3ced9 Merge pull request #567 from GPflow/explicit-kwargs Explicit kwargs 21 November 2017, 16:53 UTC
fe6e6e6 explicit kwargs for conditionals 20 November 2017, 18:06 UTC
a578ec3 Merge branch 'master' of https://github.com/GPflow/GPflow 20 November 2017, 17:55 UTC
6c35a7a Inter-domain features for GPflow 1.0 (#530) * Add Features base classes * Convert SGPR and SVGP models to use InducingFeatures (including backwards compatibility) * Fix tests * Added Multiscale feature. To show the generality of the inter-domain code. * Fixed py2 metaclass issue, as per John Bradshaw's suggestion. * Improve docstrings, register Multiscale feature * Change SGPR models to determine feature length dynamically [but feature.__len__() still needs to be made dynamic as well!] * Bits and pieces missed in the merge. * Add features to __init__. * Fixed incorrect parameter dtype assignment on compile. * Two bugfixs. - Static assignment of len(feature) - Upper bound mixin referred to Z. * Fixed bugs in multiscale & added features. * Added tests for `Multiscale` inducing features. * Updated `RELEASE.md`, and small changes for tests. * add test for len(feature) * Deprecation property for `Z`, relative imports, improved test. * `SGPMC` has inducing features now + better docstrings. * Fixed `SGPMC`. * Testing now uses tf1.4. * `feat` now `feature` + other changes. * Update _version.py * change exception 20 November 2017, 17:43 UTC
0741f86 Increase test coverage. (#565) * Add a bunch of test for Parameter and DataHolder. Minibatch seed can be changed after cleaning or in defer_build. * Add dataholder tests. * Add failure creation tests to data holders. * Shape and dtype for dataholders work for external tensors. * According fix in dataholder test. * Change travis file. * Experiments with travis. * Improvements in Parameterized tests. * Exclude external optimizer from coverage report. * Improvements in optimizer tests. * Indent functions in optimizer's tests. * Increase coverage in Parameterized. * Increase codecov for Parameterized. * Developing test coverage further. * Tests Parameterized feeds. * Call parameter size in tests. * 100% for ParamList. * Minibatch tests. * Increase coverage for Minibatch. * Setup.py clean up. Stick to 1.4 tensorflow version. Remove backwards for py2.7. * Increase coverage for Parameters. * Increase coverage for Parameters build check. * Core tests for TensorConverter. * Code coverage targets. 20 November 2017, 14:48 UTC
f42fc3e Merge pull request #560 from GPflow/artemav/fixing-notebooks Fixes at `multiclass` and `models` notebooks. 16 November 2017, 12:11 UTC
17971da Docstring for value method. 16 November 2017, 10:51 UTC
6c0f367 Merge branch 'master' into artemav/fixing-notebooks 16 November 2017, 10:36 UTC
05a7127 Merge branch 'master' of github.com:GPflow/GPflow 16 November 2017, 10:31 UTC
36043d7 get_variable_by_name has different arguments, it is not possible to unify these tests with get_tensor_by_name. 16 November 2017, 09:55 UTC
9f060ac Fix in misc test at get_variable_by_name function. 16 November 2017, 09:40 UTC
c5e638c Fix in misc test. 16 November 2017, 09:28 UTC
c452eae Remove filter for tests directory in 'codecov' yaml configuration. 16 November 2017, 09:25 UTC
456c478 Clear caches for FITCvsVFE.ipynb. 16 November 2017, 09:21 UTC
c6f700b Merge pull request #556 from GPflow/value-property adding value property 16 November 2017, 09:03 UTC
784d4bb Variable is always initializable in misc. 16 November 2017, 01:42 UTC
981dfe6 Correcting misc module. 16 November 2017, 01:36 UTC
981d423 Add tests to misc test cases. 16 November 2017, 01:27 UTC
cf70789 Add test_misc.py. 16 November 2017, 01:11 UTC
9216f88 Increase coverage for misc.py. 16 November 2017, 01:05 UTC
29e26f8 Increase coverage for misc file. 16 November 2017, 00:57 UTC
e25f0ab Ignore file. 15 November 2017, 23:53 UTC
e2d40d1 Fixes at notebooks multiclass and models. 15 November 2017, 23:08 UTC
88ddcb8 Fixing tests for assign & read_values modifications at parameterized object. 15 November 2017, 21:12 UTC
4e295b5 Merge branch 'master' into value-property 15 November 2017, 14:18 UTC
4ff00cb Using `fixed` now throws error. (#559) * Using `fixed` now throws error. * Tests now don't refer to `.fixed` any more. 15 November 2017, 13:15 UTC
188d678 Merge branch 'master' into value-property 15 November 2017, 12:09 UTC
4788b59 Update RELEASE.md (#558) 15 November 2017, 12:08 UTC
3875119 add tests for `value` property 15 November 2017, 11:19 UTC
249bb21 Merge branch 'master' of https://github.com/GPflow/GPflow 15 November 2017, 11:14 UTC
a22b850 Merge branch 'master' of https://github.com/GPflow/GPflow into chain_transform 15 November 2017, 11:11 UTC
7724e4e Tests for pandas frame in parameterized assign. 15 November 2017, 09:41 UTC
b75251b Pandas Series is acceptable in assign operation. 14 November 2017, 23:29 UTC
fc8ea51 Add read_values feature for parameterized objects. 14 November 2017, 23:18 UTC
56b4689 Initializing must not be persevering. 13 November 2017, 23:14 UTC
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