swh:1:snp:ffdd0a7d2c8ea15ad41d45b3b178f668bd942287
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Tip revision: 132ff3b511872d504d88a6b35e26ac4652fcf5ed authored by Derek Young on 01 May 2007, 00:00:00 UTC
version 0.2.0
Tip revision: 132ff3b
depth.r
######################################################################
# the following depth function can compute the depth for             #
# multi points at one time                                           #
######################################################################

#dyn.load("~fxuan/depth/spherical/sphericaldepth.so")
depth <- function(pts,x,Cx=var(x)){
  x=x%*%t(chol(solve(Cx)))
  pts=pts%*%t(chol(solve(Cx)))
  y <- .Fortran("mudepth",
                as.integer(nrow(x)),
                as.integer(nrow(pts)),
                as.integer(ncol(x)),
                as.single(pts),
                as.single(x),
                as.integer(1:nrow(pts)),
                as.single(1:nrow(pts)),
                PACKAGE="mixtools")
  count <- y[[6]]
  n <- nrow(x)
#  depth <- sqrt(8)*(count-n*(n-1)/4)/sqrt((n*(n-1)))#this is to standardize the depth
#  depth <- (factorial(n)/(2*factorial(n-2)))^(-1)*count
  depth <- choose(n,2)^(-1)*count
  depth
}
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