from typing import (
Optional,
overload,
List,
Dict,
OrderedDict,
Tuple,
Iterable,
KeysView,
Any,
)
class TupleProxyIterator:
def __init__(self, proxy: Any): ...
def __iter__(self) -> TupleProxyIterator: ...
def __next__(self) -> Optional[str]: ...
class TupleProxy:
def __init__(self, encoding: str = ...) -> None: ...
def __copy__(self) -> TupleProxy: ...
def compare(self, other: TupleProxy) -> int: ...
def getMinFields(self) -> int: ...
def getMaxFields(self) -> int: ...
def _getindex(self, index: int) -> str: ...
@overload
def __getitem__(self, key: slice) -> List[str]: ...
@overload
def __getitem__(self, key: int) -> Any: ...
def _setindex(self, index: int, value: Optional[str]) -> None: ...
def __setitem__(self, index: int, value: Optional[str]) -> None: ...
def __len__(self) -> int: ...
def __iter__(self) -> TupleProxyIterator: ...
class NamedTupleProxy(TupleProxy):
def __setattr__(self, key: str, value: str) -> None: ...
def __getattr__(self, key: str) -> str: ...
class GTFProxy(NamedTupleProxy):
def to_dict(self) -> Dict[str, Any]: ...
def from_dict(self, d: Dict[str, Any]) -> None: ...
def invert(self, lcontig: int) -> None: ...
def keys(self) -> KeysView[str]: ...
def setAttribute(self, key: str, value: Any) -> None: ...
def attribute_string2dict(self, s: str) -> OrderedDict[str, Any]: ...
def dict2attribute_string(self, d: Dict[str, Any]) -> str: ...
def attribute_string2iterator(self, s: str) -> Iterable[Tuple[str, Any]]: ...
def __getattr__(self, key: str) -> Any: ...
def __setattr__(self, key: str, value: Any) -> None: ...
# deprecated:
# def asDict(self) -> Any: ...
# def as_dict(self) -> Any: ...
# def fromDict(self, *args, **kwargs) -> Any: ...
class GFF3Proxy(GTFProxy): ...
class BedProxy(NamedTupleProxy):
def __setattr__(self, key: str, value: Any) -> None: ...
class VCFProxy(NamedTupleProxy):
@property
def pos(self) -> int: ...
def __setattr__(self, key: str, value: Any) -> None: ...