https://github.com/zhirongbaolab/CellIDAlignment
History
Tip revision: 7d5f9853cfc6f8def19e02a0a22a22a2c519e2ac authored by U-MSKCC\SantellA on 31 July 2020, 14:54:41 UTC
initial commit of tidied alignment projet code
Tip revision: 7d5f985
File Mode Size
ProximityGraphs
TPS3D
datafiles
gmmreg_cpd
icp
matlab_loading_code
FilterDeathsN.m -rw-r--r-- 6.0 KB
FilterDivisionsN.m -rw-r--r-- 9.7 KB
FilterUnnamedCellsN.m -rw-r--r-- 6.6 KB
README.md -rw-r--r-- 135 bytes
WG_prealignment_model_driver.m -rw-r--r-- 5.0 KB
buildConstraintMatrixNeighborhood.m -rw-r--r-- 2.3 KB
coalignNamedEmbryos.m -rw-r--r-- 2.7 KB
coalignNamedEmbryosPerTime.m -rw-r--r-- 3.8 KB
coalignNamedEmbryosToEM.m -rw-r--r-- 1.9 KB
code_readme.txt -rw-r--r-- 967 bytes
computeAffineLeastSquares.m -rw-r--r-- 369 bytes
computeCorrectnessAndRealMatches.m -rw-r--r-- 1.5 KB
correctmatches.m -rw-r--r-- 392 bytes
correctmatchesnames.m -rw-r--r-- 235 bytes
countConstraintViolationsNeighborhood.m -rw-r--r-- 3.3 KB
distance.m -rw-r--r-- 1.3 KB
findNearbyDivisions.m -rw-r--r-- 871 bytes
iterativeMatchWithConstraintsNoAnswerN.m -rw-r--r-- 4.8 KB
iterativeMatchWithConstraintsNoAnswerNPreGraph.m -rw-r--r-- 4.5 KB
lapjv.m -rw-r--r-- 10.1 KB
matchPointClounds.m -rw-r--r-- 1.5 KB
matchPointCloundsConsensus.m -rw-r--r-- 1.7 KB
matchPointCloundsConsensusMultiembOptimizedIteratedN.m -rw-r--r-- 3.7 KB
matchPointCloundsConsensusMultiembOptimizedN.m -rw-r--r-- 2.4 KB
matchPointCloundsFast.m -rw-r--r-- 1.3 KB
matchPointCloundsWithPerturbationUpdatingConstraintsN.m -rw-r--r-- 14.2 KB
matchPointCloundsWithPerturbationUpdatingConstraintsNIt.m -rw-r--r-- 6.9 KB
test_em_embryo1_alignment_new.m -rw-r--r-- 12.9 KB
test_em_embryo2_alignment_new.m -rw-r--r-- 13.1 KB
test_em_embryo9_alignment_new.m -rw-r--r-- 9.5 KB
tissueLevelAccuracySimplified.m -rw-r--r-- 3.5 KB
visualizeMatches.m -rw-r--r-- 2.7 KB
visualizeMatchesNamed.m -rw-r--r-- 3.1 KB

README.md

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