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Revision cdd1f987c1b4869a0deb2dd8248af0ab5a1c9575 authored by Travis Abbott on 13 January 2015, 03:11:03 UTC, committed by Travis Abbott on 13 January 2015, 03:11:03 UTC 
update gmt bwa run-mem to lean on gmt/ShellPipeline
 
the code to deal with error detection in pipes has been pulled out.
1 parent e9baddd
History
File Mode Size
alignment_summary @ 8932081
bam-readcount @ c044123
bam-window @ 572bfaf
bassovac @ 41b7bc4
bin
bmm @ 311e4d9
breakdancer @ 8f07f3d
configuration-manager @ f719544
copyCat @ 78b25a7
cron @ 584bc07
fqgrep @ fe0206d
genome-db-cosmic @ bdec904
genome-db-omim @ d9b949a
genome-db-pfam @ e5acfb0
genome-music
genome-music-testdata @ 860ea75
genome-snapshot-deps @ 7d13e9e
genome-snapshot-testdata @ 72c0ded
genome-sys-user
genome-webserver
genome-www
getopt-complete @ 2dc69f2
gms-config @ 6ccaa62
gmt-sys-vmbuilder
graphite @ 8a08a11
hooks
init
jenkins @ 03a62f9
joinx @ e83e763
lib
pairoscope @ 5fdcd27
sciClone @ 723cadc
scripts
sff2fastq @ b815f97
somatic-sniper @ b83aab3
sqitch
tgi-etc @ 08ba1a6
tigra @ 6fe6b74
tigra-sv @ 715dda8
ur @ ef244bd
varscan @ 83ae9d8
vendor
workflow @ 541917f
.gitignore -rw-r--r-- 302 bytes
.gitmodules -rw-r--r-- 9.7 KB
.mailmap -rw-r--r-- 301 bytes
.test-tracker.conf -rw-r--r-- 365 bytes
LICENSE -rw-r--r-- 7.5 KB
README -rw-r--r-- 618 bytes
WHERE_TO_PUT_CODE -rw-r--r-- 2.4 KB
create-c-project.sh -rwxr-xr-x 2.9 KB
create-project -rwxr-xr-x 2.9 KB
test-data-relocate-me l--------- 55 bytes

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