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https://github.com/Terkild/CITE-seq_optimization
01 April 2021, 19:12:10 UTC
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Tip revision: 1c7fcabb18a1971dc4d6e29bc3ed4f6f36b2361f authored by Terkild on 13 March 2021, 20:04:44 UTC
Add figures for review
Tip revision: 1c7fcab
FileModeSize
10X-Datasets-UMI-per-marker_files
ADT-counting-methods_files
ADT-reads-in-cells-vs-empty-drops_files
Antibody-titration_files
Cell-number-titration_files
Demux_Preprocess_Downsample_files
Load-unfiltered-data_files
R
Snakemake
Volume-and-cell-number-titration_files
Volume-titration_files
data
figures
.gitignore -rw-r--r--40 bytes
10X Datasets UMI per marker.Rmd -rw-r--r--3.6 KB
10X-Datasets-UMI-per-marker.md -rw-r--r--3.5 KB
ADT counting methods.Rmd -rw-r--r--19.1 KB
ADT reads in cells vs empty drops.Rmd -rw-r--r--17.0 KB
ADT-counting-methods.md -rw-r--r--19.2 KB
ADT-reads-in-cells-vs-empty-drops.md -rw-r--r--20.1 KB
Antibody titration.Rmd -rw-r--r--29.2 KB
Antibody-titration.md -rw-r--r--33.6 KB
CITE-seq_optimization.Rproj -rw-r--r--205 bytes
Cell number titration.Rmd -rw-r--r--18.6 KB
Cell-number-titration.md -rw-r--r--22.7 KB
Demux_Preprocess_Downsample.Rmd -rw-r--r--21.1 KB
Demux_Preprocess_Downsample.md -rw-r--r--26.8 KB
Load unfiltered data.Rmd -rw-r--r--14.7 KB
Load-unfiltered-data.md -rw-r--r--15.6 KB
README.md -rw-r--r--2.0 KB
Sequencing satuation.R -rw-r--r--1.1 KB
Volume and cell number titration.Rmd -rw-r--r--15.8 KB
Volume titration.Rmd -rw-r--r--18.3 KB
Volume-and-cell-number-titration.md -rw-r--r--19.9 KB
Volume-titration.md -rw-r--r--22.4 KB

README.md

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