https://github.com/cran/ape
Tip revision: d8753e6931fc7632d10cecab9aac0591a8116875 authored by Emmanuel Paradis on 06 August 2004, 00:00:00 UTC
version 1.2-4
version 1.2-4
Tip revision: d8753e6
DESCRIPTION
Package: ape
Version: 1.2-4
Date: 2004-08-06
Title: Analyses of Phylogenetics and Evolution
Author: Emmanuel Paradis <paradis@isem.univ-montp2.fr>
Korbinian Strimmer <strimmer@stat.uni-muenchen.de>
Julien Claude <claude@isem.univ-montp2.fr>
Gangolf Jobb <gangolf.deletethis@treefinder.de>
Rainer Opgen-Rhein <opgen@stat.uni-muenchen.de>
Yvonnick Noel <noel@univ-lille3.fr>
Ben Bolker <bolker@zoo.ufl.edu>
Maintainer: Emmanuel Paradis <paradis@isem.univ-montp2.fr>
Depends: gee
Description: Ape provides functions for reading, writing, plotting,
and manipulating phylogenetic trees, analyses of comparative data
in a phylogenetic framework, analyses of diversification and
macroevolution, computing distances from allelic and nucleotide
data, reading nucleotide sequences, and several tools such as
Mantel's test, computation of minimum spanning tree, the population
parameter theta based on various approaches, generalized skyline plots,
estimation of absolute evolutionary rates and clock-like
trees using non-parametric rate smoothing, conversion of APE trees
to and from hclust objects and for classifying genes in trees using
the Klastorin-Misawa-Tajima approach.
License: GPL version 2 or newer
Packaged: Fri Aug 6 15:07:25 2004; PARADYS