https://github.com/histocartography/histocartography
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<h1>Python Module Index</h1>
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<a href="#cap-h"><strong>h</strong></a>
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<table class="indextable modindextable">
<tr class="pcap"><td></td><td> </td><td></td></tr>
<tr class="cap" id="cap-h"><td></td><td>
<strong>h</strong></td><td></td></tr>
<tr>
<td><img src="_static/minus.png" class="toggler"
id="toggle-1" style="display: none" alt="-" /></td>
<td>
<a href="api/histocartography.html#module-histocartography"><code class="xref">histocartography</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.interpretability.html#module-histocartography.interpretability"><code class="xref">histocartography.interpretability</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.interpretability.base_explainer.html#module-histocartography.interpretability.base_explainer"><code class="xref">histocartography.interpretability.base_explainer</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.interpretability.grad_cam.html#module-histocartography.interpretability.grad_cam"><code class="xref">histocartography.interpretability.grad_cam</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.interpretability.graph_pruning_explainer.html#module-histocartography.interpretability.graph_pruning_explainer"><code class="xref">histocartography.interpretability.graph_pruning_explainer</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.interpretability.lrp_gnn_explainer.html#module-histocartography.interpretability.lrp_gnn_explainer"><code class="xref">histocartography.interpretability.lrp_gnn_explainer</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.metrics.html#module-histocartography.metrics"><code class="xref">histocartography.metrics</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.metrics.metrics.html#module-histocartography.metrics.metrics"><code class="xref">histocartography.metrics.metrics</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.ml.html#module-histocartography.ml"><code class="xref">histocartography.ml</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.ml.layers.html#module-histocartography.ml.layers"><code class="xref">histocartography.ml.layers</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.ml.layers.constants.html#module-histocartography.ml.layers.constants"><code class="xref">histocartography.ml.layers.constants</code></a></td><td>
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<td></td>
<td>   
<a href="api/histocartography.ml.layers.dense_gin_layer.html#module-histocartography.ml.layers.dense_gin_layer"><code class="xref">histocartography.ml.layers.dense_gin_layer</code></a></td><td>
<em></em></td></tr>
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<td></td>
<td>   
<a href="api/histocartography.ml.layers.gin_layer.html#module-histocartography.ml.layers.gin_layer"><code class="xref">histocartography.ml.layers.gin_layer</code></a></td><td>
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<td></td>
<td>   
<a href="api/histocartography.ml.layers.mlp.html#module-histocartography.ml.layers.mlp"><code class="xref">histocartography.ml.layers.mlp</code></a></td><td>
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<td></td>
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<a href="api/histocartography.ml.layers.multi_layer_gnn.html#module-histocartography.ml.layers.multi_layer_gnn"><code class="xref">histocartography.ml.layers.multi_layer_gnn</code></a></td><td>
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<td>   
<a href="api/histocartography.ml.layers.pna_layer.html#module-histocartography.ml.layers.pna_layer"><code class="xref">histocartography.ml.layers.pna_layer</code></a></td><td>
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<a href="api/histocartography.ml.models.html#module-histocartography.ml.models"><code class="xref">histocartography.ml.models</code></a></td><td>
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<a href="api/histocartography.ml.models.base_model.html#module-histocartography.ml.models.base_model"><code class="xref">histocartography.ml.models.base_model</code></a></td><td>
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<a href="api/histocartography.ml.models.cell_graph_model.html#module-histocartography.ml.models.cell_graph_model"><code class="xref">histocartography.ml.models.cell_graph_model</code></a></td><td>
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<a href="api/histocartography.ml.models.hact_model.html#module-histocartography.ml.models.hact_model"><code class="xref">histocartography.ml.models.hact_model</code></a></td><td>
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<a href="api/histocartography.ml.models.hovernet.html#module-histocartography.ml.models.hovernet"><code class="xref">histocartography.ml.models.hovernet</code></a></td><td>
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<a href="api/histocartography.ml.models.tissue_graph_model.html#module-histocartography.ml.models.tissue_graph_model"><code class="xref">histocartography.ml.models.tissue_graph_model</code></a></td><td>
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<td>   
<a href="api/histocartography.ml.models.zoo.html#module-histocartography.ml.models.zoo"><code class="xref">histocartography.ml.models.zoo</code></a></td><td>
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<td>   
<a href="api/histocartography.pipeline.html#module-histocartography.pipeline"><code class="xref">histocartography.pipeline</code></a></td><td>
<em></em></td></tr>
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<td>   
<a href="api/histocartography.preprocessing.html#module-histocartography.preprocessing"><code class="xref">histocartography.preprocessing</code></a></td><td>
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<a href="api/histocartography.preprocessing.assignment_matrix.html#module-histocartography.preprocessing.assignment_matrix"><code class="xref">histocartography.preprocessing.assignment_matrix</code></a></td><td>
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<a href="api/histocartography.preprocessing.feature_extraction.html#module-histocartography.preprocessing.feature_extraction"><code class="xref">histocartography.preprocessing.feature_extraction</code></a></td><td>
<em></em></td></tr>
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<td>   
<a href="api/histocartography.preprocessing.graph_builders.html#module-histocartography.preprocessing.graph_builders"><code class="xref">histocartography.preprocessing.graph_builders</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.preprocessing.io.html#module-histocartography.preprocessing.io"><code class="xref">histocartography.preprocessing.io</code></a></td><td>
<em></em></td></tr>
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<td></td>
<td>   
<a href="api/histocartography.preprocessing.nuclei_concept_extraction.html#module-histocartography.preprocessing.nuclei_concept_extraction"><code class="xref">histocartography.preprocessing.nuclei_concept_extraction</code></a></td><td>
<em></em></td></tr>
<tr class="cg-1">
<td></td>
<td>   
<a href="api/histocartography.preprocessing.nuclei_extraction.html#module-histocartography.preprocessing.nuclei_extraction"><code class="xref">histocartography.preprocessing.nuclei_extraction</code></a></td><td>
<em></em></td></tr>
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<td></td>
<td>   
<a href="api/histocartography.preprocessing.stain_normalizers.html#module-histocartography.preprocessing.stain_normalizers"><code class="xref">histocartography.preprocessing.stain_normalizers</code></a></td><td>
<em></em></td></tr>
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<td>   
<a href="api/histocartography.preprocessing.stats.html#module-histocartography.preprocessing.stats"><code class="xref">histocartography.preprocessing.stats</code></a></td><td>
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<td>   
<a href="api/histocartography.preprocessing.superpixel.html#module-histocartography.preprocessing.superpixel"><code class="xref">histocartography.preprocessing.superpixel</code></a></td><td>
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<a href="api/histocartography.preprocessing.tissue_mask.html#module-histocartography.preprocessing.tissue_mask"><code class="xref">histocartography.preprocessing.tissue_mask</code></a></td><td>
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<td>   
<a href="api/histocartography.preprocessing.utils.html#module-histocartography.preprocessing.utils"><code class="xref">histocartography.preprocessing.utils</code></a></td><td>
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<a href="api/histocartography.utils.html#module-histocartography.utils"><code class="xref">histocartography.utils</code></a></td><td>
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<a href="api/histocartography.utils.draw_utils.html#module-histocartography.utils.draw_utils"><code class="xref">histocartography.utils.draw_utils</code></a></td><td>
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<a href="api/histocartography.utils.graph.html#module-histocartography.utils.graph"><code class="xref">histocartography.utils.graph</code></a></td><td>
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<a href="api/histocartography.utils.image.html#module-histocartography.utils.image"><code class="xref">histocartography.utils.image</code></a></td><td>
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<a href="api/histocartography.utils.io.html#module-histocartography.utils.io"><code class="xref">histocartography.utils.io</code></a></td><td>
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<a href="api/histocartography.utils.torch.html#module-histocartography.utils.torch"><code class="xref">histocartography.utils.torch</code></a></td><td>
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<a href="api/histocartography.visualization.html#module-histocartography.visualization"><code class="xref">histocartography.visualization</code></a></td><td>
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<td>   
<a href="api/histocartography.visualization.visualization.html#module-histocartography.visualization.visualization"><code class="xref">histocartography.visualization.visualization</code></a></td><td>
<em></em></td></tr>
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