https://github.com/cran/unmarked
Tip revision: b28459ab6f0489b9ad75a597fccde2ed1452b244 authored by Richard Chandler on 06 August 2013, 00:00:00 UTC
version 0.10-2
version 0.10-2
Tip revision: b28459a
NAMESPACE
# Methods needed from other packages
importFrom(stats, confint, fitted, coef, vcov, predict, update, profile,
simulate, residuals, logLik)
importFrom(graphics, plot, hist)
importFrom(utils, head)
importFrom(reshape, melt, cast, recast)
# Fitting functions
export(occu, occuFP, occuRN, pcount, pcountOpen, multinomPois, distsamp, colext,
gmultmix, gdistsamp, gpcount)
export(removalPiFun, doublePiFun)
# S4 classes
exportClasses(unmarkedFit, unmarkedFitOccu, unmarkedFitOccuFP, unmarkedFitDS,
unmarkedFitPCount, unmarkedFitMPois, unmarkedFitPCO,
unmarkedFrame, unmarkedFrameOccu, unmarkedFramePCount,
unmarkedFrameMPois, unmarkedFrameDS, unmarkedMultFrame,
unmarkedFrameGMM, unmarkedFrameGDS, unmarkedFramePCO,
unmarkedFrameGPC,
unmarkedEstimate, unmarkedFitList, unmarkedModSel,
unmarkedRanef)
# Methods
exportMethods(backTransform, coef, confint, coordinates, fitted, getData,
getP, getFP, getB, getY, head, hessian, linearComb, mle, modSel, nllFun, numSites,
numY, obsCovs, obsNum, "obsCovs<-", obsToY, "obsToY<-", parboot, plot,
hist, predict, profile, projection, residuals, sampleSize, SE,
show, simulate, siteCovs, "siteCovs<-", summary, update, vcov,
yearlySiteCovs, "yearlySiteCovs<-", "[", smoothed, projected,
nonparboot, logLik, LRT, ranef, bup)
# Constructors
export(unmarkedEstimate, fitList, mapInfo, unmarkedFrame,
unmarkedFrameOccu, unmarkedFrameOccuFP, unmarkedFramePCount, unmarkedFrameMPois,
unmarkedFrameDS, unmarkedMultFrame, unmarkedFrameGMM,
unmarkedFramePCO, unmarkedFrameGDS, unmarkedFrameGPC)
# Formatting
export(csvToUMF, formatLong, formatWide, formatMult, formatDistData)
# Misc
export(imputeMissing, gxhn, gxexp, gxhaz, dxhn, dxexp, dxhaz, drhn, drexp,
drhaz, grhn, grexp, grhaz, sight2perpdist, lambda2psi, SSE)
useDynLib(unmarked)