https://github.com/cran/Rcpp
Tip revision: b62824151c733ec9544df164fd22de73ef0d3a3a authored by Dirk Eddelbuettel on 01 October 2012, 06:36:16 UTC
version 0.9.14
version 0.9.14
Tip revision: b628241
ChangeLog
2012-09-30 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.14
* inst/NEWS: Release 0.9.14
* inst/include/Rcpp/config.h: Release 0.9.14
* debian/*: Similarly updated for new release to Debian
2012-09-08 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.sugarOps.R: More sugar Ops unit tests
2012-09-07 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.sugarOps.R: (Incomplete) beginnings of new
unit test file for sugar operations on vectors and matrices
2012-09-07 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/functions/sign.h: Sign gets a SEXP operator
2012-09-03 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/sugar/functions/math.h: Added new sugar
function trunc(), round() and signif()
* inst/unitTests/runit.sugar.R: Added unit tests for these
2012-09-01 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Makefile: The 'all' target is now empty to prevent
autobuilders such as R-Forge from falling over
2012-07-23 Dirk Eddelbuettel <edd@debian.org>
* R/bib.R: Trim the trailing ".bib" from the generated bibtex
filename as Windows adds one anyway leading to two and an error
2012-07-21 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/Module.h (Rcpp): Corrected typo / incomplete
reference in finalizer use
2012-07-06 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/config.h: In order to not attempt to include
exception_defines.h if on OS X (as the clang runtime may not have
predictable access to g++ headers providing these), do not define
RCPP_HAS_DEMANGLING which is used in src/exceptions.cpp
2012-06-28 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.13
* inst/NEWS: Release 0.9.13
* inst/include/Rcpp/config.h: Release 0.9.13
* debian/*: Similarly updated for new release to Debian
* tests/doRUnit.R: Updated, added (by default commented-out) setting
to enforce all tests to run, added standard copyright headers noting
heritage off work by Martin Maechler and Gregor Gorjanc
* inst/unitTests/runTests.R: Only check environment variable to run
all tests if it is not already set (to cooperate with doRUnit.R)
2012-06-27 Dirk Eddelbuettel <edd@debian.org>
* src/Environment.cpp: Default ctor initializes its RObject with
R_GlobalEnv; SEXP constructor does not use a default arg as it tests
* inst/include/Rcpp/Environment.h: Corresponding change
* inst/include/RcppCommon.h: #define(s) for before/after clang++ 3.0
* src/exceptions.cpp: Added support for clang++ (>= 3.0) which (just
like g++ 4.6 or later) needs bits/exceptions_defines
* inst/unitTests/runit.modref.R: re-activated
* inst/unitTests/runit.Module.client.package.R: re-activated core
* inst/unitTests/runit.modref.R: Run only if RunAllCppTests var set
* inst/unitTests/runit.Module.client.package.R: Idem
* inst/unitTests/runit.support.R: Idem
* inst/unitTests/runit.rcout.R: Idem
* inst/unitTests/runit.environments.R: Idem
* inst/unitTests/runit.Language.R: Idem
* inst/unitTests/runit.Function.R: Idem
2012-06-23 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.12
* inst/NEWS: Release 0.9.12
* inst/include/Rcpp/config.h: Release 0.9.12
* debian/*: Similarly updated for new release to Debian
* src/Environment.cpp: Remove empty constructor which is redundant
since fix in rev3592 with default SEXP value of R_GlobalEnv
* inst/include/Rcpp/Environment.h: Idem
* inst/unitTests/runTests.R (allTests): Command-line flag --allTests
sets an environment variable indicating that all tests should run
* inst/unitTests/runit.Module.R: Run only if RunAllCppTests var set
* inst/unitTests/runit.Module.client.package.R: Idem
* inst/unitTests/runit.client.package.R: Idem
* inst/unitTests/runit.XPtr.R: Idem
* inst/unitTests/runit.macros.R: Idem
* inst/doc/unitTests/Rcpp-unitTests.R: Ensure Rcpp-unitTests
vignette is built with RunAllCppTests flag set
* cleanup: Also clean in inst/unitTests/testRcppClass/src
* DESCRIPTION: Set Maintainer: to edd@debian.org as CRAN prefers to
receive upload email from the same address the Maintainer field
2012-06-22 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.11
* inst/NEWS: Release 0.9.11
* inst/include/Rcpp/config.h: Release 0.9.11
* debian/*: Similarly updated for new release to Debian
* DESCRIPTION: Increased Depends to R (>= 2.15.1)
2012-06-21 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-modules/Rcpp-modules.Rnw: Updated to reflect use
under R 2.15.1
* inst/skeleton/zzz.R: Idem
2012-06-20 Dirk Eddelbuettel <edd@debian.org>
* R/loadRcppModules.R: Use lib.loc= argument on packageDescription()
as suggested by Kurt, and fetch libname from enclosing environment
* DESCRIPTION: Typo and grammar fixes with thanks to Kurt and Doug
2012-05-25 Dirk Eddelbuettel <edd@debian.org>
* inst/skeleton/zzz.R: Added new 'evalqOnLoad()' call for R-devel,
currently commented out
2012-05-24 Dirk Eddelbuettel <edd@debian.org>
* inst/skeleton/Num.cpp: Added to Rcpp.package.skeleton(); will be
added when module=TRUE in call
* inst/skeleton/stdVector.cpp: Idem
* inst/unitTests/testRcppModule/src/rcpp_module.cpp: added more
comments, added copyright header, corrected output of example
functions by not escaping "backslash-n" twice
* inst/unitTests/testRcppModule/src/stdVector.cpp: added some
comments, added copyright header
* inst/unitTests/testRcppModule/src/Num.cpp: Idem
* inst/unitTests/runit.Module.client.package.R: Added four simple
tests for Rcpp Modules
* inst/doc/Rcpp-modules/Rcpp-modules.Rnw: Some extensions and
clarifications added
2012-05-13 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/iostream/Rostream.h: Added Rstreambuf.h include
as per rcpp-devel discussion with Alexey Stukalov
2012-05-09 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Expanded R CMD SHLIB discussion
after suggested changes from Søren Højsgaard; also expanded compiler
section a little mentioning clang/clang++ and icc.
2012-05-02 Dirk Eddelbuettel <edd@debian.org>
* src/Environment.cpp: Move one default argument to Environment.h
* src/Function.cpp: Move one default argument to Function.h
* inst/THANKS: Thanks to Anirban Mukherjee for these two changes
2012-04-28 John M Chambers <jmc@r-project.org>
* R/RcppClass.R: use globalVariables() from R 2.15.1 (with exists()
test to no break older versions) to declare C++ fields and methods
* inst/unitTests/testRcppClass/R/load.R: test use
2012-04-22 Dirk Eddelbuettel <edd@debian.org>
* src/debugging.cpp: Expanded 'if defined()' test to included Cygwin
thanks to a patch submitted by Dario Buttari
2012-04-19 Dirk Eddelbuettel <edd@debian.org>
* src/Evaluator.cpp: errorOccuredSym never used and commented out
2012-04-18 John M Chambers <jmc@r-project.org>
* R/RcppClass.R: New version of setRcppClass, allowing R classes to
extend C++ classes used via Rcpp modules
* R/loadModule.R: New function, replaces uses of .onLoad()
* man/*: Added/updated corresponding documentation
2012-04-07 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/Vector.h: bug fix. reported on Rcpp-devel
http://comments.gmane.org/gmane.comp.lang.r.rcpp/3292
2012-03-29 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.Vector.R: unit test for containsElementNamed
2012-03-29 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/Vector.h: Vector<> gains the
containsElementNamed method to test for presence of named element
2012-03-24 Romain Francois <romain@r-enthusiasts.com>
* src/cache.cpp: Using a single Rcpp_cache, stored in the Rcpp
namespace
* src/Evaluator.cpp: Using tryCatch instead of rcpp_tryCatch, no more
using .Internal; but still define rcpp_TryCatch for backwards compat.
2012-03-23 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added short subsection on how to
test a package from the command-line, expanding a patch by Glenn
Lawyer in response to an initial rcpp-devel post by Dirk
2012-02-16 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.10
* inst/NEWS: Release 0.9.10
* inst/include/Rcpp/config.h: Release 0.9.10
* debian/*: Similarly updated for new release to Debian
2012-02-16 Douglas Bates <bates@stat.wisc.edu>
* src/Evaluator.cpp: PROTECT the expr argument to Evaluator::Run.
Reorganize code.
2011-12-15 Douglas Bates <bates@stat.wisc.edu>
* src/Evaluator.cpp: Avoid Rf_install inside an R API call
2012-02-12 Dirk Eddelbuettel <edd@debian.org>
* R/excections.R: Revert to previous use with .Internal
* R/tools.R: Add branch for R 2.15.0 which can use
assingInMyNamespace; else still use unlockBinding
2012-02-12 Dirk Eddelbuettel <edd@debian.org>
* Rcpp-introduction.Rnw: Small wording fix thanks to Pat Burns
2012-02-06 Romain Francois <romain@r-enthusiasts.com>
* R/exceptions.R: one less .Internal call
* src/Evaluator.cpp: one less .Internal call
2012-02-03 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Extractor.h: remove use of Fast in Extractor
* inst/include/Rcpp/sugar/functions/mapply/mapply.h: new sugar
function, similar to sapply, but with 2 or 3 (for now) input vectors
2012-02-01 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/iostream/Rostream.h: no need to include Rcpp.h
here
* inst/include/RcppCommon.h: include Rostream.h here, instead of ...
* inst/include/Rcpp.h: ... here (needed for RcppArmadillo)
2012-01-29 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/diff.h: custom implementation of diff for the
REALSXP case, skipping unnecessary NA tests
2012-01-24 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: New FAQ entry on passing a single
option to g++, based on a rcpp-devel question by Whit Armstrong.
2012-01-15 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/Vector.h: fixing IntegerVector(int,int),
reported by Gregor Kastner on rcpp-devel
* inst/unitTests/runit.Vector.R: regression test for the above
2011-12-25 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.9
* inst/NEWS: Release 0.9.9
* inst/include/Rcpp/config.h: Release 0.9.9
* debian/*: Similarly updated for new release to Debian
2011-12-24 Dirk Eddelbuettel <edd@debian.org>
* Reverting the 'int64' changes listed below (during the period from
Oct-31 to Nov-07) which adversely affect packages using Rcpp
We will re-apply the 'int64' changes in a way which should
cooperate more easily with 'long' and 'unsigned long'
This covered svn revisions 3264 to 3308.
* DESCRIPTION: Remove (for now) Depends: on int64
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Dito for int64_t example
* inst/unitTests/runit.Module.client.package.R: On Windows,
deactivate 'test.Module.package'
* inst/unitTests/runit.client.package.R: On Windows, deactivate
'test.client.packageA' test
2011-12-23 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runTests.R: unit tests output 'fallback' directory
changed to '..' and files are now in top-level of $pkg.Rcheck/
2011-12-21 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.8
* inst/NEWS: Release 0.9.8
* inst/include/Rcpp/config.h: Release 0.9.8
* debian/*: Similarly updated for new release to Debian
2011-12-20 Dirk Eddelbuettel <edd@debian.org>
* inst/skeleton/zzz.R (.onLoad): correct order of arguments
2011-12-18 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/FastLM/lmArmadillo.R: Link with -llapack when using
external Armadillo library (but RcppArmadillo makes all this easier)
2011-12-18 Romain Francois <romain@r-enthusiasts.com>
* inst/doc/*: Fixes to various vignettes for new version of highlight
2011-12-16 Douglas Bates <bates@stat.wisc.edu>
* inst/unitTests/runit.stats.R: Correct cut+paste typo in qbinom
* inst/include/Rcpp/XPtr.h: Check for XPtr type constructing from SEXP
2011-12-12 John M Chambers <jmc@r-project.org>
* R/RcppClass.R: Added setRcppClass for classes extending C++ classes
* man/setRcppClass.Rd: Added corresponding documentation
* NAMESPACE: Added corresponding exports entry
2011-11-13 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/stats/f.h: Correct call to not require ncp parameter
* inst/unitTests/runit.stats.R: Add unit tests for pf(), pnf(),
pchisq(), pnchisq() and pcauchy()
2011-11-07 Romain Francois <romain@r-enthusiasts.com>
* include/Rcpp/internal/wrap.h: implemented wrap_dispatch_importer__impl
for int64 and uint64, needed for RProtoBuf
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Add int64_t usage example
2011-11-06 Romain Francois <romain@r-enthusiasts.com>
* include/Rcpp/modules/Module_generated_Pointer_method.h: added code to deal
with const free "methods", e.g. OUT foo( const Class*, ...) in modules
Before const_method could only deal with actual const methods of the class,
e.g. OUT Class::foo( ... ) const
* include/Rcpp/modules/Module_generated_Pointer_CppMethod.h: idem
* include/Rcpp/as.h: deal with as<int64_t> and as<uint64_t>
* include/Rcpp/internal/export.h : deal with as< some_container<int64_t> >
and as< some_container<uint64_t> > where some_container is some container
that has iterators, e.g. std::vector
2011-10-31 Romain Francois <romain@r-enthusiasts.com>
* include/Rcpp/int64/int64_lite.h: handling int64_t and uint64_t types,
based on the int64 package
* include/Rcpp/internal/wrap.h: new dispatch layers to handle int64_t,
uint64_t and containers of these
* DESCRIPTION: new depending on int64
2011-10-28 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/iostream/Rostream.h (Rcpp): Added tentative patch
for operator<< also contributed by Jelmer Ypma -- but kept commented
out for now
2011-10-25 Dirk Eddelbuettel <edd@debian.org>
* src/Rostream.cpp: Patch by Jelmer Ypma which adds a new device
'Rcout' not unlike std::cout but uses Rprintf internally
* src/Rstreambuf.cpp: Idem
* include/include/Rcpp/iostream/Rostream.h: Idem
* include/include/Rcpp/iostream/Rstreambuf.h: Idem
* include/include/Rcpp.h: Include new headers
* inst/unitTests/runit.rcout.R: Added simple unit test
2011-09-29 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.7
* inst/NEWS: Release 0.9.7
* inst/include/Rcpp/config.h: Release 0.9.7
* debian/*: Similarly updated for new release to Debian
* inst/include/Rcpp/sugar/block/SugarBlock_1.h: Apply second path by
Martyn Plummer to permit compilation on Solaris
* inst/include/Rcpp/sugar/block/SugarBlock_2.h: Idem
* inst/include/Rcpp/sugar/block/SugarBlock_3.h: Idem
* inst/include/Rcpp/sugar/matrix/outer.h: Idem
* inst/include/Rcpp/vector/LazyVector.h: Idem
* inst/unitTests/testRcppModule/src/stdVector.cpp: Idem
2011-09-24 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/Extractor.h: Apply patch by Martyn Plummer to
help with compilation on Solaris
* inst/include/Rcpp/sugar/block/Vectorized_Math.h: Idem
* inst/include/Rcpp/sugar/functions/math.h: Idem
* inst/include/Rcpp/sugar/block/SugarBlock_2.h: Also applied path by
Martyn Plummer, but with additional #ifdef layer for SunPro Compiler
* inst/include/Rcpp/vector/LazyVector.h: Idem
2011-08-26 Douglas Bates <bates@stat.wisc.edu>
* inst/examples/OpenMP/OpenMPandInline.r: Added another variant
using import_transform for the Rcpp Vector class.
2011-08-26 Dirk Eddelbuettel <edd@debian.org>
* inst/include/*h: Removed exception specifiers in function headers
* src/*cpp: Corresponding changes in implementations
* inst/examples/OpenMP/OpenMPandInline.r: Added two std::transform()
variants as suggested in rcpp-devel email by Davor Cubranic
2011-08-25 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/OpenMP/OpenMPandInline.r: Added new example for
OpenMP via inline, comparing simple loops with plain Rcpp and sugar
2011-08-23 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/Misc/ifelseLooped.r: Added new example based on blog
post today, and a StackOverflow ansers---and which shows how Rcpp can
accelerate loops that may be difficult to vectorise due to dependencies
* inst/examples/Misc/: New directory for small examples regrouping
the new example as well as the fibonacci example added in Rcpp 0.9.6
2011-08-17 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added a short section including an
example on the issue raised by Murray wherein 64 bit 'long' integer
types can be cast with loss to numeric types without error or warning.
2011-07-28 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.Function.R: new unit test for accessing a
non-exported function from a namespace
2011-07-26 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.6
* inst/NEWS: Release 0.9.6
* inst/include/Rcpp/config.h: Release 0.9.6
* debian/*: Similarly updated for new release to Debian
2011-07-24 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/Fibonacci/fib.r: New example showing how to compute a
Fibonacci sequence using Rcpp and compare it to R and byte-compiled R
2011-07-14 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/RcppGibbs/RcppGibbs.R: New example RcppGibbs,
extending Sanjog Misra's Rcpp illustration of Darren Wilkinson's
comparison of MCMC Gibbs Sampler implementations;
* inst/examples/RcppGibbs/timeRNGs.R: added short timing on Normal
and Gaussian RNG draws between Rcpp and GSL as R's rgamma() is seen
to be significantly slower
2011-07-13 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/traits/is_eigen_base.h: helper traits to
facilitate implementation of the RcppEigen package. The is_eigen_base
traits identifies if a class derives from EigenBase using SFINAE
* inst/include/Rcpp/internal/wrap.h: new layer of dispatch to help
RcppEigen
2011-07-07 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/XPtr.h: The XPtr class template gains a second
template parameter allowing the developper to supply his/her own
finalizer instead of the default one that calls delete
2011-07-05 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.5
* inst/NEWS: Release 0.9.5
* inst/include/Rcpp/config.h: Release 0.9.5
* debian/*: Similarly updated for new release to Debian
2011-07-02 Dirk Eddelbuettel <edd@debian.org>
* cleanup: Also clean in examples/OpenMP/
2011-06-09 Dirk Eddelbuettel <edd@debian.org>
* inst/skeleton/zzz.R (.onLoad): Force load of methods package before
calling loadRcppModules() to make 'R CMD check' happier
2011-06-06 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/Vector.h : init becomes protected to fix the bug
reported by Doug Bates on Rcpp-devel.
2011-05-31 Romain Francois <romain@r-enthusiasts.com>
* R/loadRcppModules.R: New argument "direct" in loadRcppModules
* R/tools.R: New unexported function forceAssignInNamespace
2011-05-29 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/stats/random/rlnorm.h: Repaired accidental header
guard from 'norm' to 'lnorm' so that the file really gets included,
make several calls to standard library 'exp()' explicit as '::exp()'
and fixed a cut-and-paste typo
2011-05-24 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/internal/wrap.h: For arguments of type const char *,
wrap now checks for NULL arguments before calling Rf_mkString()
* unitTests/runit.wrap.R: Added unit test for this
2011-05-14 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-quickref/Rcpp-quickref.Rnw: Corrected an error in STL
example and added two more STL examples
2011-04-27 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/OpenMP/piWithInterrupts.cpp: Beginnings of new
contributed example on OpenMP as well as user interrupt handling
2011-04-26 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/functions/mean.h: new sugar function: mean
* inst/include/Rcpp/sugar/functions/var.h: new sugar function: var
* inst/include/Rcpp/sugar/functions/sd.h: new sugar function: sd
2011-04-19 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: New example setting row and column
names for matrices
2011-04-16 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: New example using Rcpp.plugin.maker
2011-04-12 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.4
* inst/NEWS: Release 0.9.4
* inst/include/Rcpp/config.h: Release 0.9.4
* debian/*: Similarly updated for new release to Debian
2011-04-12 Romain Francois <romain@r-enthusiasts.com>
* inst/unitTests/testRcppModules/src/stdVector.cpp: compiler
disambiguation
* src/r_cast.cpp: use a callback to R's "as.character" instead of
calling Rf_coerceVector, which did not work as expected for factors
2011-04-11 Romain Francois <romain@r-enthusiasts.com>
* R/loadRcppModules.R: New R function "loadRcppModules" that looks
for the "RcppModules" field in the DESCRIPTION file, loads and
populates the modules into the package NAMESPACE
* man/loadRcppModules.Rd: documentation
* inst/unitTests/testRcppModule: using loadRcppModules
2011-04-11 Dirk Eddelbuettel <edd@debian.org>
* inst/man/Rcpp-package.Rd: Added JSS reference in \references{}
* inst/doc/*: Added JSS reference to vignettes
2011-04-09 Dirk Eddelbuettel <edd@debian.org>
* inst/CITATION: Finalized using JSS data on volume, number, pages
2011-04-07 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-quickref/Rcpp-quickref.Rnw: Add patch by Christian
pointing out need for Rcpp:: namespace qualifier, and hint for Rcpp-FAQ
2011-04-05 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added OS X entry for min. sufficient
versions of OS X itself and Xode based on Simon's post to rcpp-devel
2011-04-05 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.3
* inst/NEWS: Release 0.9.3
* inst/include/Rcpp/config.h: Release 0.9.3
* debian/*: Similarly updated for new release to Debian
2011-04-05 Romain Francois <romain@r-enthusiasts.com>
* R/01_show.R: set of cosmetic changes to the show method for C++
classes
* inst/include/Rcpp/Module.h: fixed module bug by not using
singletons of the class_ template
2011-04-03 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-introduction.Rnw: Updated to forthcoming JSS paper
* inst/CITATION: Added citation() support using forthcoming paper
* inst/doc/Makefile: Trying make parallel builds possible by not calling
'clean' in the 'all' target; thanks to Brian Ripley for the heads-up
2011-04-02 Dirk Eddelbuettel <edd@debian.org>
* cleanup: Also clean in inst/unitTest/testRcppModule/src/
* inst/include/RcppCommon.h: Define new variable for g++ < 4.6.0
* src/exceptions.cpp: Include <exception_defines.h> up to g++-4.5 only
* inst/unitTests/testRcppModule/src/stdVector.cpp: Use #ifdef not #if
* inst/include/Rcpp/module/Module_generated_ctor_signature.h: Add a
bit of null-op code to suppress a 'unused parameter' warning in the
initial (and non-templated) ctor_signature() function
2011-03-21 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/testRcppModule/src/stdVector.cpp: Protect push_back
declaration by #ifdef as it conflicts with -std=c++0x use for g++-4.5
2011-03-17 Dirk Eddelbuettel <edd@debian.org>
* inst/include/RcppCommon.h: Condition the typedef for 'long long'
of rcpp_long_long_type on the (still experimental) support for C++0x
which can be enabled with the non-portable g++ flag '-std=c++0x';
adding a test for C++0x support suppresses a new warning with g++ about
long long being part of C++98; thanks to Kurt Hornik for raising this
2011-03-10 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/grow.h: Applied another patch kindly supplied by
Murray which fixes another clang/llvm and C++ conformance issue by
re-ordering declarations as unqualified names must be declared before
they are used, even when used within templates.
2011-02-28 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Makefile: Call R and Rscript relative to R_HOME/bin
2011-02-23 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.2
* inst/NEWS: Release 0.9.2
* inst/include/Rcpp/config.h: Release 0.9.2
* debian/*: Similarly updated for new release to Debian
* inst/include/RcppCommon.h: Apply patch by Alexey Stukalov to enable
basic Intel Compiler support without Cxx0x or TR1 features
* inst/THANKS: Added some Thank You! to Baptiste, Alexey and Ken
* inst/include/Rcpp/Module.h: Minor reworking of module loading
macro to get rid of one g++ warning
2011-02-22 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.Module.client.package.R: Add a test for OS X
10.5.* or older and do not execute the test here as g++ 4.2.1 balks
at some of the Rcpp modules code. Thanks to Simon Urbankek for
pinning this down and Baptiste Auguie for additonal testing.
2011-02-20 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added RcppArmadillo example
2011-02-19 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added three more setup-related
questions in the first section following another rcpp-devel question
2011-02-14 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.1
* inst/NEWS: Release 0.9.1
* inst/include/Rcpp/config.h: Release 0.9.1
* debian/*: Similarly updated for new release to Debian
2011-02-13 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/Module.h: Cache return of Rf_install("Module") in
a static helper function used by the LOAD_RCPP_MODULE macro
2011-02-11 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added two more examples
2011-02-10 Douglas Bates <bates@stat.wisc.edu>
* inst/include/Rcpp/XPtr.h: Replace calls to EXTPTR_PTR with
R_ExternalPtrAddr. The distinction is important when R is
compiled with PROTECTCHECK enabled.
2011-02-01 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/Vector.h: extra PROTECT'ion in several places
2011-01-25 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/DataFrame_generated.h: Assign Rf_install() result
to local SEXP (by modifying generator script creating the file)
* inst/include/Rcpp/DataFrame.h: Assign Rf_install() result to local SEXP
* inst/include/Rcpp/DottedPair.h: idem
* inst/include/Rcpp/grow.h: idem
* inst/include/Rcpp/Module.h: idem
* inst/include/Rcpp/vector/eval_methods.h: idem
* inst/include/Rcpp/vector/Vector.h: idem
2011-01-25 Douglas Bates <bates@stat.wisc.edu>
* src/exceptions.cpp: Assign Rf_install() result to local SEXP
* src/Evaluator.cpp: idem
* src/Reference.cpp: idem
* src/S4.cpp: idem
* inst/include/Rcpp/Date.h: Use predefined symbol.
2011-01-22 Dirk Eddelbuettel <edd@debian.org>
* src/cache.cpp: Assign Rf_install() result to local SEXP
* src/Environment.cpp: idem
* src/Evaluator.cpp: idem
* src/Function.cpp: idem
* src/Function.cpp: idem
* src/RObject.cpp: idem
* src/Symbol.cpp: idem
* inst/doc/Rcpp.bib: Added SoDA (some time ago)
2011-01-13 Douglas Bates <bates@stat.wisc.edu>
* src/Reference.cpp: Protect the value being set in Reference::FieldProxy::set
2011-01-11 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/string_proxy.h: fix implicit conversion to int,
reported by Daniel Sabanes Bove on Rcpp-devel
* inst/unitTests/runit.vector.R: unit test for the above fix
2011-01-08 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp.bib: Updated a number of CRAN versions
2011-01-07 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/config.h (RCPP_VERSION): Set to 0.9.0, at last.
2011-01-06 Douglas Bates <bates@stat.wisc.edu>
* R/zzz.R (.onLoad): Don't call init_Rcpp_cache here.
* src/Rcpp_init.c: Don't register init_Rcpp_cache. It should only
be called once and it is called in the C function R_init_Rcpp.
* NAMESPACE: Use registered symbols instead of relisting them.
Registration allows for checking the number of arguments.
2011-01-04 Dirk Eddelbuettel <edd@debian.org>
* src/debugging.cpp: Treat the *BSD flavours like Windows and offer
file and line number but not stack trace (for lack of execinfo)
* src/Makevars: Replace implicit variable $^ with explicit list
2011-01-02 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-quickref/Rcpp-quickref.Rnw: Applied patch with
additional documentation by Christian Gunning
2010-12-23 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/RObject.h: New internal class SEXPstack to handle
garbage collection. Presumably more efficient than R_PreserveObject
and R_ReleaseObject
* inst/include/Rcpp/sugar/operators/times.h: More efficient operator*
for REALSXP sugar expressions, avoiding unnecessary NA tests.
* inst/include/Rcpp/sugar/operators/divides.h: More efficient
operator/ for REALSXP sugar expressions, avoiding unnecessary NA
tests.
* inst/include/Rcpp/sugar/operators/minus.h: More efficient operator- for
REALSXP sugar expressions, avoiding unnecessary NA tests.
2010-12-22 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/operators/plus.h: More efficient operator+
for REALSXP sugar expressions, avoiding unnecessary NA tests.
2010-12-22 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.Vector.R: Applied patch by Christian Gunning
to add more tests for complex-typed vectors
2010-12-20 Dirk Eddelbuettel <edd@debian.org>
* R/inline.R (Rcpp.plugin.maker): Reverse order in PKG_LIBS
2010-12-19 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.9.0
* debian/*: Similarly updated for new release to Debian
2010-12-18 Dirk Eddelbuettel <edd@debian.org>
* inst/announce/ANNOUNCE-0.9.0.txt: Started announcement post
* inst/unitTests/runit.Date.R: Added new unit tests for date and
datetime from string
2010-12-17 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/Datetime.h: correct default format to use %OS for
fractional seconds and not the popular typo %OS (i.e. ooh, not zero)
* src/Datetime.cpp: add missing as.POSIXct() after strptime for
constructor from string as we then use the constructor from double
* src/Date.cpp: add missing as.Date() after strptime for constructor
from string as we then use the constructor from int
2010-12-13 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/string_proxy.h: List::Proxy did not
convert bool correctly, reported on Rcpp-devel by Daniel Sabanés
Bové <daniel.sabanesbove@ifspm.uzh.ch>
2010-12-12 Romain Francois <romain@r-enthusiasts.com>
* R/SHLIB.R: new unexported R function SHLIB, small wrapper around
R CMD SHLIB
* inst/include/Rcpp/sprintf.h: returning a std::string to avoid leaks
2010-12-10 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/sprintf.h: Use vsnprintf() instead
2010-12-10 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/barrier.h: faster versions (crossing the write
barrier) for string_elt, etc ...(to be used only internally)
* src/barrier.cpp: implementation of the above
2010-12-09 John M Chambers <jmc@r-project.org>
* src/Module.cpp: Rcpp/src/exceptions.cpp,
Rcpp/src/Rcpp_init.c, etc. add a not_initialized exception and a
dummy_pointer to identify such objects, throw exc. back to R
2010-12-07 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/matrix.h: Matrix gains a nested ::Sub
typedef
2010-12-05 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/module/Module_generated_class_constructor.h: the
default constructor was always considered valid because of the use of
&yes instead of &yes_arity<0>
* R/Rcpp.package.skeleton.R: Rcpp.package.skeleton( "foo",
example_code = FALSE) did not work properly. Rcpp.package.skeleton
gains some arguments
2010-12-05 Dirk Eddelbuettel <edd@debian.org>
* src/Date.cpp: Add 1900 to tm.year after mktime00() call as we now
no longer assume the field is '1900-less'
* src/Date.cpp: Define new static const variable baseYear as 1900
and use throughout
* inst/unitTests/runit.Date.R (test.Date.getFunctions): Added unit
tests for the get* functions of the Date class
* R/bib.R (bib): Correct expression for default Rcpp bibtex file
2010-12-04 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/Date.h: Remove addition of 1900 in getYear()
2010-12-04 Romain Francois <romain@r-enthusiasts.com>
* inst/doc/Rcpp-quickref/Rcpp-quickref.Rnw: documentation patch by
Christian Gunnning <xian@unm.edu>
* inst/include/Rcpp/vector/matrix.h: fix SubMatrix. Bug reported by
Christian Gunnning <xian@unm.edu> on Rcpp-devel
* inst/include/Rcpp/vector/SubMatrix.h: factored out of matrix.h
* inst/include/Rcpp/sprintf.h: new sprintf template to format strings
2010-12-03 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.RObject.R: fix 'inherits' test added today
* inst/include/Rcpp/module/Module_generated_Constructor.h: Applied
patch by Tama Ma <pingnang@phys.ethz.ch> for up to seven args in ctor
* inst/include/Rcpp/module/Module_generated_class_constructor.h: Idem
* inst/include/Rcpp/module/Module_generated_ctor_signature.h: Idem
2010-12-03 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/RObject.h : new inline method inherits that
checks if an object inherits from a given class (wrapper around
Rf_inherits)
* inst/unitTests/runit.RObject.R: unit test for the above
2010-12-02 Douglas Bates <bates@stat.wisc.edu>
* inst/include/Rcpp/generated/Function__operator.h,
inst/include/Rcpp/Function.h: operator() becomes const.
2010-11-29 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/Vector.h: trying to please suncc after
CRAN checks
* R/Module.R: protect the module$refClassGenerators <- generators
line against the case where there are no classes (triggered a
problem with the parser package)
2010-11-27 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.8.9
* debian/*: Similarly updated for new release to Debian
2010-11-26 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/Vector.h: List::create( _["foo"] ) sets
the SEXP to R_MissingArg, usueful for formal arguments
specifications, simpler form than List::create( _["foo"] =
R_MissingArg )
* inst/include/Rcpp/macros/unroll.h: helper macro RCPP_UNROLL_LOOP
* inst/include/Rcpp/vector/MatrixColumn.h: added
MatrixColumn::operator=( MatrixColumn& ) otherwise it gets
synthetized by the compiler
* inst/include/Rcpp/vector/MatrixRow.h: same for MatrixRow
* inst/include/Rcpp/vector/Matrix.h: added Matrix( SubMatrix ) and
Matrix::operator=( SubMatrix )
2010-11-25 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/module/Module_generated_function.h: new .function
with formal argument specification
* inst/include/Rcpp/module/Module_generated_CppFunction.h: helper
classes for the above
* R/Module.R: using the formal argument specification if available
* R/populate.R: new R function populate to dump the contents of a
module into an environment or a namespace
* man/populate.Rd: documentation for populate
2010-11-24 Romain Francois <romain@r-enthusiasts.com>
* R/00_classes.R: formals<- method for C++Function that allows to set
default arguments, etc .. to a C++ function
2010-11-23 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Makefile: Call Rscript with --vanilla to skip user settings
2010-11-23 Romain Francois <romain@r-enthusiasts.com>
* R/00_classes.R: C++Class gains a docstring slot to host self
documentation
* R/Module.R: calling an exposed C++ more efficiently by using the xp
directly rather than traversing the map internally
* R/00_classes.R: C++Function gains a docstring slot to host self
documentation of the internal function. And a "signature" slot to
host the C++ signature of the function
* R/01_show.R: updated show( C++Function ) to display the docstring
and the signature. updated show( C++Class ) to display the docstring.
* inst/include/Rcpp/module/Module_generated_CppFunction.h: self
documentation for exposed C++ functions and extraction of the
signature
* inst/include/Rcpp/module/Module_generated_function.h: idem
2010-11-22 Romain Francois <romain@r-enthusiasts.com>
* R/00_classes.R: C++OverloadedMethods gains an "info" class methods,
factored out from Module.R
* R/01_show.R: more information printed in show( C++Class )
* inst/include/Rcpp/Module/Module_generated_get_signature.h:
templates to grab method signatures
* inst/include/Rcpp/Module.h: CppMethod gains a signature method that
returns the signature of the method.
* R/00_classes.R: C++OverloadedMethods gains a "signatures" field
that contains the signature of each overload
* R/Module.R: registered method gain an automatically generated self
description that contains the method(s) signature(s) and the
docstring that is declared in .method
* inst/include/Rcpp/Module/Module_generated_CppMethod.h: implement
signature
* inst/include/Rcpp/Module/Module_generated_Pointer_CppMethod.h: idem
2010-11-21 Romain Francois <romain@r-enthusiasts.com>
* R/Module.R: internal version of cpp_hasDefaultConstructor
* src/Module.cpp: implementation (Class__has_default_constructor)
* inst/include/Rcpp/Module.h: support (class_.has_default_constructor)
* inst/include/Rcpp/module/Module_generated_class_constructor.h: new interface
for exposing constructors, the init_ disappears and the template arguments
are directly applied to the .constructor function
* inst/include/Rcpp/module/Module_generated_Constructor.h: removed init_*
* inst/include/Rcpp/module/Module_generated_method.h: .method gains a docstring
argument to allow self documentation of exposed methods
* inst/include/Rcpp/module/Module_generated_PointerMethod.h: idem
* R/Module.R: grab method docstrings
2010-11-20 John M Chambers <jmc@r-project.org>
* R/Module.R: now checks for the existence of a default constructor
for a C++ class and generates a suitable $initialize() method accordingly.
2010-11-20 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/MatrixRow.h: added missing return *this ;
* R/Module.R: dispatch based on void-ness of the methods. For example
if all methods are known to be void, etc ...
* R/00_classes.R: more information in the C++OverloadedMethods ref
class
* src/Module.cpp: new .External CppMethod__invoke_void and
CppMethod__invoke_notvoid that are used when we know for sure that
all overloaded methods are void, or not void
* inst/include/Rcpp/Module.h: class_ gains invoke_void and
invoke_notvoid to support the changes above
2010-11-18 Douglas Bates <bates@stat.wisc.edu>
* inst/include/Rcpp/module/Module_generated_[class_]Constructor.h:
allow up to 6 arguments to .constructor
2010-11-18 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Module.h: rework the class_ template to allow
overloaded methods
* R/00_classes.R: The C++Method class disappears and the
C++OverloadedMethods enters. a "C++OverloadedMethods" object points
to a set of overloaded C++ methods that all share the same name.
* R/Module.R: adapt some of the code to cope with changes above
2010-11-17 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/as_vector.h: added the as_vector function
that turns a sugar matrix expression into a vector of the appropriate
type
* inst/include/Rcpp/vector/Matrix.h: new SubMatrix class
2010-11-13 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Module.h: expose constructors as the
"cpp_constructor" field of "C++ClassRepresentation" and the
"constructors" slot of "C++Class"
2010-11-07 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/operators/minus.h: fixed
Minus_Vector_Primitive<RTYPE,false,T>
* inst/unitTests/runit.sugar.R: new test for the above
2010-11-05 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Module.h: exposing multiple constructors in modules
* src/Module.cpp: The mangled class name is now "Rcpp_" plus the
class name. The previous version used the address of the external
pointer to the module, which was not constant.
2010-11-04 Douglas Bates <bates@stat.wisc.edu>
* inst/include/Rcpp/module/Module_generated_Constructor.h: remove
redundant 'return's.
2010-11-04 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Module.h: experimental way to specify which
constructor to use in classes exposed by modules. This is still too
restrictive as it only allows one constructor.
* inst/include/Rcpp/sugar/block/SugarMath.h: extend the SUGAR_MATH_1
macro so that we can apply functions (e.g. sqrt) directly on SEXP
2010-11-01 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION (Version): Release 0.8.8
* debian/*: Similarly updated for new release to Debian
2010-10-30 Dirk Eddelbuettel <edd@debian.org>
* inst/include/RcppCommon.h: New define IS_GCC_450_OR_LATER
* inst/include/Rcpp/Extractor.h: Do not enable Rcpp::Fast if g++
4.5.0 or later is used -- we need to figure out what upsets it
2010-10-23 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/MatrixRow.h: Faster row indexing
* inst/include/Rcpp/vector/Matrix.h: added use of _ to get columns
and rows of a matrix. For example if x is a NumericMatrix, x(_,i)
returns the same as x.column(i) and x(i,_) returns the same as
x.row(i)
* inst/unitTests/runit.Matrix.R: unit tests for the above
* inst/include/Rcpp/sugar/functions/sum.h: the sugar version of sum
now takes care of missing values correctly
* inst/include/Rcpp/sugar/functions/cumsum.h: sugar version of cumsum
2010-10-21 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/MatrixColumn.h: Fixed indexing
bug (mismatch between number of rows and number of columns
* inst/unitTests/runit.Matrix.R: test fix above based on the
R-help/Rcpp-devel thread:
http://article.gmane.org/gmane.comp.lang.r.rcpp/851
* inst/include/Rcpp/vector/MatrixColumn.h: Column gains a operator=
taking a sugar expression. Faster indexing (caching the pointer
instead of calling nrow many times)
* inst/include/Rcpp/vector/Matrix.h: first pass at making matrix
indexing faster
2010-10-21 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/Module.h: Reorder instantiation for class_
2010-10-20 Dirk Eddelbuettel <edd@debian.org>
* include/Rcpp/XPtr.h: Applied patch by Karl Millar
* include/Rcpp/vector/Vector.h: Idem
2010-10-19 Dirk Eddelbuettel <edd@debian.org>
* src/posixt.cpp: Correct POSIXct, POSIXt ordering for R 2.12.0
2010-10-14 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION (Version): Release 0.8.7
* debian/*: Similarly updated for new release to Debian
2010-10-10 Romain Francois <romain@r-enthusiasts.com>
* tests/doRUnit.R: workaround to disable tests on windows 64 until we can
figure out what upsets R CMD check.
* R/Module.R: expose the finalizer
2010-10-07 John M Chambers <jmc@r-project.org>
* R/Module.R: modify cpp_refMethods to substitute the .External
directly with the method and class pointers.
2010-10-03 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/stats/random/r*: Added comment reminding users
read up on Section 6.3 of "Writing R Extensions" and the need to
call GetRNGstate() and PutRNGstate() when using R's RNGs
2010-09-30 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/MatrixRow.h: Matrix row inherits
VectorBase so that it becomes a sugar expression, so that we can do
something like this:
NumericMatrix x( ... ) ;
NumericVector x0 = x.row(0) ;
* inst/include/Rcpp/vector/MatrixColumn.h: idem for columns
* cleanup: run make clean in the inst/doc directory to install
the fake vignettes
2010-09-27 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/traits/is_sugar_expression.h: new trait class
to recognize sugar expressions
* inst/include/Rcpp/vector/Vector.h: operator=( sugar expression)
no longer allocate unnecessary memory.
2010-09-26 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rpp/Fast.h: new helper class Rcpp::Fast that allows
faster indexing of Vector
* inst/include/Rcpp/sugar/operators/plus.h: port to operator+ the same
improvements than in operator*
2010-09-25 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/routines.h: declare routines that are registered
* src/Rcpp_init.c: register routines
* R/*.R: use registration information in many .Call and .External
functions to speed things up
* inst/include/Rcpp/RangeIndexer.h: experimenting with loop unrolling
2010-09-24 John M Chambers <jmc@r-project.org>
* R/Module.R: modify cpp_fields to substitute the .Call
directly with the field and class pointers; supplements the
changes entered by Romain on 9-22. (svn rev 2165, 2141)
* src/Rcpp_init.c: set up registration of .Call's (rev 2167)
2010-09-24 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/Range.h : Range gains some
operators (++,--,n etc ...)
* inst/examples/ConvolveBenchmarks/convolve3_cpp.cpp: using the new
Range operators
* inst/include/Rcpp/sugar/operators/times.h: speed improvements. Not
using pointer to member functions seems to be beneficial.
* inst/include/Rcpp/sugar/nona/nona.h: sugar function that wraps a
sugar expression in an object that pretends it does not contain any
missing values. This allows many sugar functions and operators to use
their fast versions when we know that the object does not contain
missing values.
2010-09-22 Romain Francois <romain@r-enthusiasts.com>
* R/Module.R: set [[ and [[<- as regular methods too, which restores
previous behavior
2010-09-17 Romain Francois <romain@r-enthusiasts.com>
* src/Reference.cpp: new objects are created via a callback to R's
new function, as R_do_new_object did always return the same
environment
* R/00_classes.R: new ref class C++Method to represent C++ methods
and holding their external pointers directly (same idea as C++Field)
* inst/include/Rcpp/Module.h: internal support for
C++Method (template class S4_CppMethod)
2010-09-17 John M Chambers <jmc@r-project.org>
* R/00_classes.R, R/02_completion.R, et al.: use of environment
underlying the reference classes removes need for slots in
C++Object class (svn rev's 2133, 2134)
2010-09-16 Romain Francois <romain@r-enthusiasts.com>
* R/00_classes.R: moving classes definition here
* inst/Rcpp/Module.h: added C++ class S4_field that builds S4 objects
of class C++Field. Build the list of fields as part of the creation
of the C++Class objects
* src/Module.cpp: .Call functions CppField__get and CppField__set to
get/set values of an object's field using external pointers
directly (no std::map lookup internally)
* R/Module.R: (unexported) functions .getField and .setField that
call CppField__get and CppField__set
* inst/include/Rcpp/Reference.h: skeleton for a Rcpp::Reference class
that will help dealing with reference classes on the C++ side
* src/Reference.cpp: implementation (needs update)
2010-09-16 John M Chambers <jmc@r-project.org>
* R/Module.R, tests/modRef.R: un-generic of new(); return a
generator object for C++ classes. Use environment as superclass.
2010-09-15 Romain Francois <romain@r-enthusiasts.com>
* DESCRIPTION: added the declaration MinimumSvnRev to control which
version of R-devel we need so that Rcpp fully works, currently set to
52905
* R/zzz.R: check the svn revision of R against the declared
MinimumSvnRev requirement and print a message if necessary (this will
only stay for the interim period while we develop 0.8.7 so that we
all are on the same page.
* inst/include/Rcpp/Module.h: added methods to class_Base :
methods_arity and methods_voidness to query the number of arguments
of methods of a class and if the method is void
* R/Module.R: implement referenceMethods (from methods) for 'C++Class'
2010-09-11 Dirk Eddelbuettel <edd@debian.org>
* src/Date.cpp: Add include of unistd.h to make Solaris happy
2010-09-09 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.8.6
* debian/*: Similarly updated for new release to Debian
2010-09-08 Dirk Eddelbuettel <edd@debian.org>
* inst/include/RcppCommon.h: Also include typeinfo header file
2010-09-08 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Module.h : added class_Base::property_names
method to grab the names of all fields (properties)
* src/Module.cpp : added R access (.Call) function
CppClass__properties to grab the names of the fields (property) from
the XP of a class
* inst/include/Rcpp/Module.h : added class_Base::property_is_readonly
method to query if a property is read only
* src/Module.cpp : added R access (.Call) function
CppClass__property_is_readonly to query if a class property is read
only
* inst/include/Rcpp/Module.h : added class_Base::property_class
method to grab the C++ class of a property
* src/Module.cpp : added R access (.Call) function
CppClass__property_class to grab the C++ class of a property
2010-09-06 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/ConvolveBenchmarks/exampleRCode.r: Rewritten /
simplified using the rbenchmark::benchmark() function
* DESCRIPTION: Added Suggests: on rbenchmark package
2010-09-04 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/ConvolveBenchmarks/exampleRCode.r: Some cosmetics
* inst/examples/ConvolveBenchmarks/convolve3_cpp.cpp: Remove one
unneccessary loop to set values to zero (which the ctor does for us)
2010-09-03 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-extending/Rcpp-extending.Rnw: Add highlight definitions
* inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Idem
* inst/doc/Rcpp-package/Rcpp-package.Rnw: Idem
2010-09-02 Dirk Eddelbuettel <edd@debian.org>
* src/msvcmath.cpp: Undo unmotivated msvc patch
* inst/include/Rcpp/msvc/: Idem
* inst/include/Rcpp/XPtr.h: Idem
* inst/include/RcppCommon.h: Idem
* src/Date.cpp: Idem
* DESCRIPTION: Added Suggests: on highlight package
2010-08-20 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/complex.h : binary operators for Rcomplex : +,-,*,/
2010-08-15 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/SugarBlock.h: more control of the NA behavior
in SUGAR_BLOCK_2. SUGAR_BLOCK_2 will now propagate the NA, and the new
SUGAR_BLOCK_2_NA will use a fixed NA (can be true or false). This can be
useful if the function that is sugar'ed never generates NA.
* inst/include/Rcpp/sugar/undoRmath.h : undo the macros done by Rmath.h
2010-08-13 Douglas Bates <bates@stat.wisc.edu>
* include/Rcpp.h: undo more defines from Rmath.h
2010-08-13 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/complex.h: simplify complex sugar functions
Re, Im, Conj, Mod
* inst/include/Rcpp/sugar/complex.h: new sugar functions operating on
complex expressions: exp, log, sqrt, cos, sin, tan, acos, asin, atan,
acosh, asinh, atanh, cosh, sinh, tanh
* inst/unitTests/runit.sugar.R: added regression test for complex functions
which did not handle NA properly before
* DESCRIPTION: no longer requireing GNU make as we dont use it anymore
* src/Makevars: removed the use of ifeq (which was the last thing requiring
GNU make)
2010-08-12 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/math.h: replace previous versions of floor,
abs, exp, ceil, ceiling with versions generated by the SUGAR_MATH_1
macro
2010-08-11 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/vector.h: Vector gains constructor
taking size and function pointers, acting as generators :
Vector( const int& siz, stored_type (*gen)(void), bool seed = true )
template <typename U1>
Vector( const int& siz, stored_type (*gen)(U1), const U1& u1,
bool seed = true)
template <typename U1, typename U2>
Vector( const int& siz, stored_type (*gen)(U1,U2), const U1& u1,
const U2& u2, bool seed = true)
so that for example :
NumericVector( 10, norm_rand )
generates a N(0,1) vector of size 10
* inst/include/Rcpp/stats/random/rlnorm.h: Added rlnorm and rlnorm_
* inst/include/Rcpp/stats/random/rgamma.h: Added rgamma and rgamma_
* inst/include/Rcpp/stats/random/rt.h: Added rt and rt_
* inst/include/Rcpp/stats/random/rbinom.h: Added rbinom and rbinom_
* inst/include/Rcpp/stats/random/rnchisq.h: Added rnchisq and rnchisq_
* inst/include/Rcpp/stats/random/rgeom.h: Added rgeom and rgeom_
* inst/include/Rcpp/stats/random/rhyper.h: Added rhyper and rhyper_
* inst/include/Rcpp/stats/random/rnbinom_mu.h: Added rnbinom_mu and rnbinom_mu_
* inst/include/Rcpp/stats/random/rnbinom.h: Added rnbinom and rnbinom_
* inst/include/Rcpp/stats/random/rpois.h: Added rpois and rpois_
* inst/include/Rcpp/stats/random/rweibull.h: Added rweibull and rweibull_
* inst/include/Rcpp/stats/random/rlogis.h: Added rlogis and rlogis_
* inst/include/Rcpp/stats/random/rwilcox.h: Added rwilcox and rwilcox_
* inst/include/Rcpp/stats/random/rsignrank.h: Added rsignrank and rsignrank_
* inst/include/Rcpp/stats/random/rnorm.h: some optimization
* inst/include/Rcpp/stats/random/rf.h: calculate n2/n1 just once
* inst/include/Rcpp/sugar/SugarBlock.h : templates and macros to facilitate
generation of sugar functions that take one or two double parameters
* inst/include/Rcpp/sugar/math.h: using SugarBlock to generate new
sugar functions:
(1 parameter) : gamma, lgamma, digamma, trigamma, tetragamma,
pentagamma, expm1, log1p, factorial, lfactorial,
cos, acosh, atan, cos, cosh, log, log10, sqrt, sin, sinh, tan, tanh
(2 parameter) : choose, lchoose, beta, lbeta, psigamma
2010-08-10 Douglas Bates <bates@stat.wisc.edu>
* include/Rcpp/stats/nbinom[_mu].h: Replace conflicting data member name
'size' by 'siz'
2010-08-10 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/stats/random/rnorm.h: Added rnorm and rnorm_
* inst/include/Rcpp/stats/random/runif.h: Added runif and runif_
* inst/include/Rcpp/stats/random/rbeta.h: Added rbeta and rbeta_
* inst/include/Rcpp/stats/random/rcauchy.h: Added rcauchy and rcauchy_
* inst/include/Rcpp/stats/random/rchisq.h: Added rchisq and rchisq_
* inst/include/Rcpp/stats/random/rexp.h: Added rexp and rexp_
* inst/include/Rcpp/stats/random/rf.h: Added rf and rf_
* inst/include/Rcpp/stats/stats.h : fixed name clash reported on Rcpp-devel
http://permalink.gmane.org/gmane.comp.lang.r.rcpp/610
2010-08-09 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/stats/lnorm.h: Added d-p-q (lnorm|weibull|logis|f)
generated by the script
* inst/include/Rcpp/vector/Vector.h: further dispatch to allow generators
to be passed to constructors of Vector
* inst/include/Rcpp/traits/has_iterator.h: new SFINAE detection of
generators
* inst/include/Rcpp/Generator.h : base template class for generators
2010-08-06 Douglas Bates <bates@stat.wisc.edu>
* unitTests/runit.stats.R: Corrected instances of numeric
arguments passed as integers, deleted tests for binomial with
fixed parameter values.
2010-08-06 Romain Francois <romain@r-enthusiasts.com>
* ../scripts/stats.R: R script to generate the template code for dpq functions
* include/Rcpp/stats/unif.h: Added d-p-q unif and tests
* include/Rcpp/stats/gamma.h: Added d-p-q gamma and tests
* include/Rcpp/stats/chisq.h: Added d-p-q chisq
2010-08-05 Douglas Bates <bates@stat.wisc.edu>
* include/Rcpp/stats/beta.h: Added d-p-q beta and tests
* include/Rcpp/stats/binom.h: Added pbinom and qbinom,
and tests of same in runit.stats.R
* include/Rcpp/stats/pois.h: Added ppois and qpois (plus
tests in runit.stats.R).
* include/Rcpp/stats/norm.h: Added pnorm and qnorm and
corresponding tests in unitTests/runit.stats.R
2010-08-05 Dirk Eddelbuettel <deddelbuettel@wtchi-stat-l2.wolve.com>
* inst/include/Rcpp/stats/norm.h: Added dnorm sugar function
* inst/include/Rcpp/stats/t.h: Added dt, pt, qt sugar functions
* inst/include/unitTests/runit.stats.R: Added corresponding tests
2010-08-05 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/functions/seq_along.h: added seq(int,int) to
mimic the R syntax : seq( 0, 5 )
* inst/include/Rcpp/sugar/Range.h: fixed compiler confusion
* inst/include/Rcpp/stats: new sugar functions Rcpp::stats::dpois and
Rcpp::stats::dbinom inspired by Richard Chandler post on Rcpp-devel:
http://lists.r-forge.r-project.org/pipermail/rcpp-devel/2010-August/000940.html
* inst/include/Rcpp/sugar/sum.h: preliminary version of Rcpp::sum (does not
deal with NA properly yet)
2010-08-04 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/: rework sugar matrix so that operator()(int,int)
is always used instead of operator[](int)
* inst/include/Rcpp/sugar/matrix/outer.h: new implementation based on
LazyVector, so that the value from the vector expression is only
retrieved once
2010-08-02 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/XPtr.h: give default values to tag and prot in XPtr ctor
2010-07-30 Romain Francois <romain@r-enthusiasts.com>
* inst/doc/Rcpp-quickref/* : new vignette Rcpp-quickref: quick reference guide
to Rcpp API
2010-07-28 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/exp.h: adapt to stricter standards on solaris/suncc
2010-07-25 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.8.5
* debian/*: Similarly updated for new release to Debian
2010-07-17 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/Vector.h: faster lhs use of names, only
using callback to R if necessary. (discovered while profiling
RProtoBuf)
* inst/include/Rcpp/RObject.h : faster lhs and rhs use of
RObject::slot, using R API functions R_do_slot and R_do_slot_assign
2010-07-16 Dirk Eddelbuettel <edd@debian.org>
* src/Date.cpp: Small fix which may make Solaris/SunStudio happy
2010-07-16 Romain Francois <romain@r-enthusiasts.com>
* man/Rcpp-package.Rd : removed old content and point to the
Rcpp-package vignette for current guidelines.
* DESCRIPTION: Updated to mention sugar and modules
2010-07-10 Romain Francois <romain@r-enthusiasts.com>
* src/Makevars: Remove last call to $shell by turning C++0x
detection off (and into a switch users can edit) which should
make builds more stable
* src/Makevars.win: Idem
* src/cxx0x/cxx0x.R: Detection script deprecated for now
2010-07-10 Romain Francois <romain@r-enthusiasts.com>
* man/CppClass-class.Rd: changed use of \linkS4Class to suppress a
warning with the development version of R
* man/CppObject-class.Rd: idem
2010-07-09 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.8.4
* debian/*: Similarly updated for new release to Debian
2010-07-09 Romain Francois <romain@r-enthusiasts.com>
* src/RObject.cpp: adapt the SlotProxy class to deal with the special
case of the .Data slot (slot<- changes the internal SEXP)
* R/Module.R: the C++Class now inherits from "character", to facilitate
S4 method dispatch
* src/Module.cpp: The CppClass ctor sets the .Data of the C++Class object
to an obfuscated name to avoid class names clashes at the R level.
2010-07-08 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/functions/head.h: new sugar function : head
* inst/include/Rcpp/sugar/functions/tail.h: new sugar function : tail
* inst/include/Rcpp/sugar/functions/tail.h: new sugar function : diag
2010-07-07 Dirk Eddelbuettel <edd@debian.org>
* inst/README: Updated and now pointing to all the other documentation
2010-07-07 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/functions/rep.h: version of rep that takes a
primitive as the first argument
2010-07-07 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runTests.R: Reverted to running all tests now that
tests are reorganised using the one-compile-per-function scheme which
significantly speeds up running of the numerous unit tests
2010-07-06 Dirk Eddelbuettel <edd@debian.org>
* src/Date.cpp: Imported mktime() from R (which is due to Arthur Olson)
2010-07-06 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/functions/ifelse.h: using compile time dispatch
based on the NA-ness of the condition type. ifelse handles primitive
arguments on the lhs, rhs or both
* inst/include/Rcpp/sugar/functions/rev.h: new sugar function: rev
2010-07-05 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/RcppCommon.h : no more using variadic macros in
RCPP_DEBUG
* inst/include/Rcpp/vector/Matrix.h: move ncol, nrow, rows and cols
in Matrix (used to be in Vector)
* inst/include/Rcpp/traits/matrix_interface.h: new SFINAE helper to
detect matrix interface (helps matrix sugar expressions)
2010-07-03 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/traits/result_of.h : also deal with functions
taking two arguments (useful for e.g. outer)
* inst/include/Rcpp/vector/MatrixBase.h : new CRTP base class
for Matrix to facilitate sugar syntax on matrices.
* inst/include/Rcpp/sugar/matrix/outer.h : new sugar function: outer
* inst/include/Rcpp/sugar/matrix/row.h: new sugar function: row
* inst/include/Rcpp/sugar/matrix/col.h: new sugar function: col
* inst/include/Rcpp/sugar/matrix/lower_tri.h: new sugar function: lower_tri
* inst/include/Rcpp/sugar/matrix/upper_tri.h: new sugar function: upper_tri
* inst/include/Rcpp/sugar/functions/rep.h: new sugar function : rep
* inst/include/Rcpp/sugar/functions/rep_len.h: new sugar function : rep_len
* inst/include/Rcpp/sugar/functions/rep_each.h: new sugar function : rep_each
2010-07-02 Dirk Eddelbuettel <edd@debian.org>
* src/RcppStringVector: Now uses std::vector<std::string>
* inst/include/classic/RcppStringVector.h: Idem
* inst/unitTests/runit.List.R: Added simple test for RcppStringVector
2010-07-01 Dirk Eddelbuettel <edd@debian.org>
* src/RcppDateVector: Index argument is int here as well
* src/RcppDatetimeVector: Idem
* inst/include/classic/RcppDateVector.h: Idem
* inst/include/classic/RcppDatetimeVector.h: Idem
* inst/unitTests/runit.List.R: Added simple test for RcppList
2010-06-30 Dirk Eddelbuettel <edd@debian.org>
* src/DateVector: Index argument is int; throw declared
* src/DatetimeVector: Idem
* inst/include/Rcpp/DateVector.h: Idem
* inst/include/Rcpp/DatetimeVector.h: Idem
2010-06-28 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/Im.h:
* inst/include/Rcpp/sugar/Re.h:
* inst/include/Rcpp/sugar/Conj.h:
* inst/include/Rcpp/sugar/Mod.h: added sugar functions for
complex vectors: Re, Im, Conj, Mod
2010-06-27 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.8.3
* debian/*: Similarly updated for new release to Debian
* inst/unitTests/runTests.R: Stop-gap measure to reduce the number of
tests run on Windows as we now have so many tests that the build
exceeds the time limit granted by the win-builder service. The forced
reduction of tests can be overcome by adding --allTests as a
command-line argument on Windows, or by running on another platform.
2010-06-25 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/posix.h: anticipate R 2.12.0 switch of classes
POSIXt and POSIXct
* inst/include/classic: New home for the 'classic' API headers. Also
some refactoring of the internals so that they can interoperate
better withuse the new API.
2010-06-24 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/vector/RangeIndexer.h: factored the RangeIndexer
class out of Vector, so that we can at a later time specialize it for
character vectors, lists, etc ...
2010-06-24 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/Date.h: add struct tm member variable and
sensible (ie non-intra-day) accessor functions; add SEXP ctor
* src/Date.cpp: Implementation of the above
* inst/unitTests/runit.Date.R: tests for the above
* inst/include/Rcpp/Datetime.h: New Datetime class
* src/Datetime.cpp: Implementation for new Datetime class
* inst/unitTests/runit.Datetime.R: first tests for Rcpp::Datetime
* inst/include/Rcpp/Datetime_forward.h: API Integration
* inst/include/Rcpp/DatetimeVector.h: New DatetimeVector class
* src/Datetime.cpp: Implementation for new DatetimeVector class
2010-06-23 Dirk Eddelbuettel <edd@debian.org>
* src/Date.cpp: Import mktime00() from R's src/main/datetime.c,
completed class implementation
* inst/include/Rcpp/Date.h: Add mktime00() declaration
* inst/include/Rcpp/DateVector.h: New DateVector class
* src/Date.cpp: Implementation for new DateVector class
2010-06-23 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Date_forward.h: forward declaration of Rcpp::Date and
support for wrap( container of Rcpp::Date ), e.g. wrap( vector<Date> )
* inst/include/Rcpp/sugar/Range.h: added the concept of range to allow
modification of several elements of a vector.
* inst/examples/ConvolveBenchmarks: version of the convolution function
using sugar indexing.
2010-06-22 Dirk Eddelbuettel <edd@debian.org>
* inst/include/Rcpp/Date.h: New Date class (not yet complete)
* src/Date.cpp: Implementation for new Date class (not yet complete)
* inst/unitTests/runit.Date.R: first tests for Rcpp::Date
2010-06-21 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/SugarPerformance/: New example to benchmark the new
syntactic 'sugar' classes
2010-06-19 Dirk Eddelbuettel <edd@debian.org>
* inst/include/RcppDoxygenExamples.h: Correct three wrong paths for
ConvolveBenchmak example files, and add missing FastLM/ examples
2010-06-18 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/sugar/*: implementation of Rcpp sugar, covering
binary operators (<,>,<=,>=,!=,==) for logical vectors or logical
expressions, arithmetic operators (+,-,*,/) for vectors and
expressions, and several functions similar to the R functions of the
same name, currently: abs, all, any, ceiling, diff, exp, ifelse,
is_na, lapply, pmin, pmax, pow, sapply, seq_along, seq_len, sign
* inst/doc/Rcpp-sugar/Rcpp-sugar.Rnw: vignette documenting Rcpp sugar
2010-06-17 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Vector.h: split into more manageable files
* inst/include/Rcpp/vector/VectorBase.h: simplify the VectorBase class
so that it is just implementing CRTP. It does not inherit from RObject anymore.
This will help implementation of sugar.
2010-06-16 Dirk Eddelbuettel <edd@debian.org>
* src/RcppDateVector.cpp: Also provide non-const operator()(int i)
* inst/include/RcppDateVector.h: Idem
2010-06-16 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/InternalFunction.h: new class Rcpp::InternalFunction
* R/Module.R: R support for Rcpp::InternalFunction
* inst/include/Rcpp/Module.h: added the LOAD_RCPP_MODULE macro to
allow loading a module from C++
* R/Module.R: if the first argument is an external pointer already,
Module assumes it is a module pointer. (R support for the item above)
2010-06-15 Dirk Eddelbuettel <edd@debian.org>
* src/RcppDatetimeVector.cpp: Use std::vector internally
* inst/include/RcppDatetimeVector.h: Idem
* src/RcppDateVector.cpp: Use std::vector internally
* inst/include/RcppDateVector.h: Idem
2010-06-14 Dirk Eddelbuettel <edd@debian.org>
* src/RcppDatetimeVector.cpp: Add constructor from int
* inst/include/RcppDatetimeVector.h: Idem
* src/RcppDateVector.cpp: Add constructor from int
* inst/include/RcppDateVector.h: Idem
2010-06-13 Dirk Eddelbuettel <edd@debian.org>
* src/RcppResultSet.cpp: Proper template specialisation for wrap
* inst/include/RcppResultSet.h: Idem
* src/RcppDateVector.cpp: Add const qualifier to operator()(int i)
* inst/include/RcppDateVector.h: Idem
2010-06-13 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Vector.h: added new factory functions for Vector:
Vector::import and Vector::import_transform
2010-06-12 Dirk Eddelbuettel <edd@debian.org>
* src/RcppDate.cpp: Simple RcppDate(SEXP) ctor added
* inst/include/RcppDate.h: Idem
* src/RcppResultSet.cpp: carved out four new wrap() functions by
splitting the existing code in add() methods off
2010-06-11 Romain Francois <romain@r-enthusiasts.com>
* R/help.R: workaround to allow the syntax "Rcpp ? something" to
bring Rcpp documentation
* inst/include/Rcpp/Module.h: support for exposing public data
members
* inst/doc/Rcpp-modules/Rcpp-modules.Rnw: a section to mention fields
as a way to expose data members
* inst/Rcpp/traits/is_na.h : new helper class Rcpp::traits::is_na
2010-06-09 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.8.2
* debian/*: Similarly updated for new release to Debian
2010-06-08 Romain Francois <romain@r-enthusiasts.com>
* src/RcppCommon.cpp: track if demangling is available (currently
only available with gcc)
2010-06-08 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.8.1
* debian/*: Similarly updated for new release to Debian
2010-06-07 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-extending*: Extended mini vignette "Rcpp-extending"
2010-06-07 Romain Francois <romain@r-enthusiasts.com>
* inst/doc/Rcpp-extending*: Added new mini vignette "Rcpp-extending"
2010-06-05 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-FAQ*: Extended mini vignette "Rcpp-FAQ"
2010-06-05 Romain Francois <romain@r-enthusiasts.com>
* inst/doc/Rcpp-FAQ*: Added new mini vignette "Rcpp-FAQ"
2010-06-04 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Module.h:
* R/Module.R: support for properties of C++ objects
2010-06-03 Romain Francois <romain@r-enthusiasts.com>
* src/RcppCommn.cpp: added show method for C++Object and C++Class
* inst/include/Rcpp/XPtr.h: getTag and getProtected are deprecated, will be
removed in Rcpp 0.8.2. methods tag and prot should be used instead. The new
methods support both lhs and rhs use.
2010-06-02 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/traits/r_type_traits.h: added missing support for
std::complex<double>, needed by RcppArmadillo
* src/RcppCommon.cpp: added internal .Call function as_character_externalptr
to extract the address of the pointer wrapped by an external pointer
2010-06-01 Romain Francois <romain@r-enthusiasts.com>
* inst/doc/Rcpp-package*: new mini vignette "Rcpp-package" to improve the
documentation of Rcpp.package.skeleton and details the steps involved in
making a package that uses Rcpp
* inst/doc/Rcpp-modules/Rcpp-modules.Rnw: document how to use modules
in other packages (namespace, etc ...)
* R/Rcpp.package.skeleton: added the module argument
* R/Module.R: prompt method for Module objects to generate skeleton of an Rd
file with the list of functions and classes defined by the module.
2010-05-30 Romain Francois <romain@r-enthusiasts.com>
* R/Module.R: completion for C++ modules.
2010-05-29 Romain Francois <romain@r-enthusiasts.com>
* R/Module.R: when a Module is loaded, it creates extensions of the
class C++Object for each internal class to enable S4 dispatch
* R/Module.R: support for completion of methods of C++ objects
2010-05-28 Romain Francois <romain@r-enthusiasts.com>
* R/cppfunction.R: withdrawn, we now use inline::cxxfunction which is
more flexible and we no longer need to depend on inline
* man/cppfunction.Rd: *
* inst/unitTests/runTests.R: The tests now require a recent version
of inline (>= 0.3.4.2)
2010-05-27 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Module.h: adding support for registering a free function
that takes a pointer to the class of the wrapped object as first argument
in class_
2010-05-26 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Module.h:
* src/Module.cpp : limited support for exposing c++ classes in Rcpp modules
* R/Module.R : classes "C++Class", "C++Object" holding external pointers
and $ method dispatching internally
2010-05-24 Dirk Eddelbuettel <edd@debian.org>
* src/Rcpp*.cpp: Moved template code from the older API to headers
headers in inst/include/*.h; removed empty source files
2010-05-21 Romain Francois <romain@r-enthusiasts.com>
* R/exceptions.R: rework rcpp_tryCatch to prevent evaluating the
expression too early (reported by Doug Bates on Rcpp-devel)
* src/Evaluator.cpp: rework Evaluator::run() so that it correctly
evaluates inside an environment (reported by Doug Bates on
Rcpp-devel)
2010-05-20 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Vector.h : correct throw specs for
vector_from_string (reported by Brian Ripley from solaris)
* inst/include/Rcpp/internal/Proxy_Iterator.h: fixed constness of
several operators in Proxy_Iterator to try to suite suncc/solaris
* inst/include/Rcpp/config.h: define RCPP_ENABLE_MODULES to hide
the experimental module features from the official api
* R/getDLL.R: removed and promoted to getDynLib in inline
2010-05-19 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/as.h: add throw specification to as
specialization, reported by suncc compiler on CRAN checks
* inst/include/Rcpp/Module.h : adding the concept of Rcpp modules,
inspired from boost.python
* R/Module.R: R side support for modules
* R/getDLL.R: generic (s4) function to get the DLL based on either
its name e.g. getDLL( "Rcpp" ) or an object of class CFunc (from the
inline package)
2010-05-17 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.8.0
* debian/*: Similarly updated for new release to Debian
2010-05-11 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/traits/*.h: added support for long long int and
unsigned long long int, which is size_t on win64
2010-05-10 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Dimension.h: added a const operator[], requested
in the Rcpp-devel thread :
http://article.gmane.org/gmane.comp.lang.r.rcpp/327
* inst/include/Rcpp/preprocessor.h: added __rcpp_info__ pseudo
reflection information to RCPP_XP_FIELD
* inst/unitTests/runit.macros.R: testing RCPP_XP_FIELD
2010-05-06 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/DataFrame.h: DataFrame( RObject::SlotProxy ) and
DataFrame( RObject::AttributeProxy ) constructors
* inst/include/Rcpp/DataFrame.h: DataFrame::create now uses the R
function data.frame and not as.data.frame, which respects the
stringsAsFactors argument.
* inst/include/Rcpp/preprocessor.h: added RCPP_XP_FIELD_SET and
RCPP_XP_FIELD_SET macros to generate getter and setter for a field of
a class handled by an external pointer. RCPP_XP_FIELD is modified to
generate both getter and setter
2010-05-05 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/S4.h: S4 gains a "is" method to identify if an
object is of a given S4 class, following Doug's advice in lme4a
* inst/include/Rcpp/algo.h: new STL-like algorithms Rcpp::any and
Rcpp::any_if
* inst/include/Rcpp/Vector.h: Vector gains a constructor taking an
RObject::SlotProxy and a constructor taking an RObject::AttributeProxy,
allowing this construct NumericVector x( y.slot( "foo" ) )
2010-05-04 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/preprocessor_generated.h: new macros to hide most of
the boiler plate code
RCPP_FUNCTION_0, ..., RCPP_FUNCTION_1
RCPP_FUNCTION_VOID_0, ...
RCPP_XP_METHOD_0, ...
RCPP_XP_METHOD_CAST_0, ...
RCPP_XP_METHOD_VOID_0, ...
2010-05-03 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.DataFrame.R: unit tests for Rcpp::DataFrame
2010-05-03 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/exceptions.h : move the what methods of exception
classes so that the symbol is defined for sure in the shared
library. This seems to make a difference due to vague linkage
issues. Decrypted from http://gcc.gnu.org/wiki/Visibility
2010-05-02 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/as.h: add throw(not_compatible) in Rcpp::as
* inst/include/Rcpp/clone.h: the clone(SEXP) moves to the headers
2010-04-28 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/Vector.h: changed Vector( size_t ) to Vector( int )
to allow Vector( 0 ) and Vector::create()
2010-04-27 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/preprocessor.h: new macro RCPP_ENUM_TRAITS to
generate traits needed to support wrap for an enum type (used in
RProtoBuf)
* R/Rcpp.package.skeleton.R: correctly handle the example_code
argument
2010-04-26 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/DataFrame_*.h: new class Rcpp::DataFrame
* inst/include/Rcpp/preprocessor.h: added RCPP_XP_FIELD macro
* inst/include/Rcpp/preprocessor_generated.h: added the set of macros
RCPP_WRAPPER_0, ..., RCPP_WRAPPER_65 to help wrapping existing
C functions into .Call callables functions
2010-04-16 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.12
* debian/*: Similarly updated for new release to Debian
* RcppLdpath.R: Remove shQuote() from trying to protect spaces in
Windows pathnames as it breaks backticks expansion usage
2010-04-06 Romain Francois <romain@r-enthusiasts.com>
* inst/include/Rcpp/traits/*.h: added support for long
2010-04-04 Romain Francois <romain@r-enthusiasts.com>
* inst/include/* : headers are moved to inst/include so that they are
are not duplicated on multi arch platforms
* R/RcppLdPath.R: RcppCxxFlags is updated to reflect the above change
* src/Makevars: simplified as the headers don't need to be copied to each
arch lib directory anymore
* src/Makevars.win: same
* inst/include/Rcpp/Vector.h : Vector<> gains a templated assignment
operator
2010-04-02 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Formula.h: new Rcpp::Formula class
* inst/unitTests/runit.Formula.R: unit test for Rcpp::Formula
2010-03-26 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.11
* debian/*: Similarly updated for new release to Debian
* inst/examples/FastLM: Updated to use new create() method
* inst/unitTests/runit.Matrix.R: New unit test new Matrix constructors
2010-03-26 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Vector.h: Fixed bug in diag()
2010-03-23 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.CharacterVector.R: New unit test for bug found by Doug
2010-03-23 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Vector.h: fixed critical bug. Vector did not have copy constructor
and assignement operators
* src/exceptions.cpp: added the demangle helper function to help debugging
* src/RcppCommon.h: added the DEMANGLE macro and the RCPP_DEBUG macro to help
debugging.
2010-03-20 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Vector.h : Vector gains a templated fill method to fill all
elements of a vector with the same value
2010-03-19 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Vector.h : Matrix gains a diag method to create diagonal
matrices
* src/Rcpp/Named.h: Named is no longer a class, but a templated function.
This preserves all the existing interface, but also allows Named to be used
in making simple vectors, e.g through the Vector::create factory functions
* src/Rcpp/Vector.h: Vector gains the "create" factory methods taking up
to 20 arguments that can be named (using the Argument class or the _
placeholder)
* src/Rcpp/make_list.h: removed since Vector::create does the job more generically
and more efficently
2010-03-19 Dirk Eddelbuettel <edd@debian.org>
* src/Rcpp/Vector.h: Matrix now also accepts a single int in the
constructor to create matrices of square sizes
* src/RcppFrame.h: Patch by Alistair Gee to make ColDatum more robust
src/RcppFrame.h: Idem
* inst/unitTests/runit.RcppFrame.R: New unit test for RcppFrame
2010-03-16 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/make_list.h: set of helper factories make_list to facilitate
production of named generic vectors.
* src/Rcpp/Named.h: new class Rcpp::Argument similar to Named but does not
contain the object, just the name. The templated Argument::operator= makes
a Named. This allows an application to define a set of arguments that it uses
in order to have a nicer construct. see the runit.Argument.R file for an example
2010-03-15 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.10
* debian/*: Similarly updated for new release to Debian
* RcppLdpath.R: Use shQuote() to protect spaces in Windows pathnames
2010-03-15 Romain Francois <romain@r-enthusiasts.com>
* inst/codebloat/codebloat.R: script to generate code (creating a
pairlist with up to n arguments).
* src/Rcpp/Function.h : Function gains a body method to retrieve
the body of the function (using the BODY macro from Rinternals.h)
2010-03-14 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/S4.h : Rcpp::S4 gains a new constructor taking a string
reference and building a new S4 object of that type. This throws an
exception if the object is not successfully created (e.g the class
is not a known S4 class)
2010-03-13 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/S4.h : new class Rcpp::S4
2010-03-12 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.9
* debian/*: Similarly updated for new release to Debian
2010-03-12 Romain Francois <romain@r-enthusiasts.com>
* inst/unitTests/runit.environments.R: mac os has a different locale
* src/Rcpp/traits/is_convertible.h: the detection is now performed without
the help of cxx0x or tr1 which makes it compatible with gcc 4.2
* src/Rcpp/traits/is_same.h: new traits is_same to help detect if two types
are the same (not currently used)
* src/Rcpp/traits/wrap_type_traits.h: use "unsigned int" instead of "size_t"
in the template specializations (64 bit compatibility)
2010-03-10 Dirk Eddelbuettel <edd@debian.org>
* R/RcppLdPath.R: More specific about quote-protection of path on Windows
* inst/doc/Rcpp-introduction.Rnw: Applied several fixes kindly suggested
by Matt Kraai
2010-03-09 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.8
* debian/*: Similarly updated for new release to Debian
2010-03-09 Romain Francois <romain@r-enthusiasts.com>
* man/Rcpp.package.skeleton.Rd: some more documentation
2010-03-07 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/Rcpp-introduction.Rnw: Added vignette based on a recent paper
2010-03-07 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/StringTransformer.h: new class template StringTransformer
that allows using a character by character function to modify
elements of a string vector (example available in package RcppExamples)
* src/Rcpp/Vector.h: string_proxy::iterator is made const char* because
R uses a global cache for the CHARSXP
2010-03-05 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Vector.h: string_proxy gains begin(), end(),
size(), and operator[] for iterating over characters of the CHARSXP
2010-03-02 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Vector.h: Vector gains a nested r_type type that is an
integral_constant<int,RTYPE> to facilitate TMP
* src/RcppCommon.{h,cpp}: added RCPP_CALL_VECTOR and RCPP_CALL_MATRIX
macros to facilitate calling a function templated by T = Vector<RTYPE>
the macro hides the boiler-plate switch( TYPEOF(x) ){ case INTSXP : ... }
2010-03-01 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Vector.h: more typedef : CharacterMatrix, StringMatrix,
GenericMatrix, ExpressionMatrix, ListMatrix
* src/ExpressionVector.cpp : replaced by templates in Vector.h
* src/Rcpp/Vector.h: use templates to cover ExpressionVector additional
methods : eval() and eval(const Environment& )
2010-02-28 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Vector.h : more generic code for vectors. All vector
types are now generated from the template Rcpp::Vector<int RTYPE>
where RTYPE is one of INTSXP, LGLSXP, REALSXP, RAWSXP, STRSXP,
VECSXP or EXPRSXP.
2010-02-24 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/exceptions.h: some exception classes factored out
* src/Rcpp/VectorBase.h: now a template, using the
Curiously recurring template pattern (the type parameter is
the derived class)
* src/Rcpp/SEXP_Vector.h: the intermediate class
SEXP_Vector_Base is removed, reverting the change on
2010-02-09. This will facilitate the introduction of the
Curiously recurring template pattern on vectors
* src/Rcpp/MatrixRow.h : Row has been factored out of SimpleVector
into a separate template class Rcpp::MatrixRow
* src/Rcpp/SimpleVector.h: gains a row method that returns
a SimpleVector::Row, aka MatrixRow<SimpleVector>
* src/Rcpp/CharacterVector.h : gains a row method that returns
a CharacterVector::Row, aka MatrixRow<CharacterVector>
* src/Rcpp/SEXP_Vector.h : gains a row method that returns
a SEXP_Vector::Row aka MatrixRow<SEXP_Vector>
* src/Rcpp/MatrixColumn.h : Column class to access elements of a
matrix column
2010-02-23 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/SimpleVector.h: added the class SimpleVector::Row
to support STL algorithms working on a row of a matrix.
* src/Rcpp/internal/ListInitialization.h: new class that
supports use of operator, (inspired from blitz) giving this
notation: IntegerVector x(3); x = 0, 1, 2 ;
2010-02-21 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/as.h: more generic as implementation. primitive
types are handled through templates which for example makes
it possible to as<GPB::int64> in RProtoBuf. std::deque<T>
and std::list<T> become as'able when T is a primitive type
as indicated by the Rcpp::traits::r_type_traits
* src/as.cpp: removed since as is now fully implemented via
templates
2010-02-19 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/as.h: as now delegates to a template class
Exporter since partial specialization was not possible with
the interface of as. It is possible to partially specialize
Exporter. std::vector<T> when T is a primitive type is
now handled through Exporter. Some support Exporter have been
added and used in RcppArmadillo
* src/Rcpp/internal/wrap.h: support for std::complex<double>
and std::complex<float> (needed for RcppArmadillo)
* src/Rcpp/traits/wrap_type_traits.h : The Importer concept
has been introduced to support wrap() of more types. If a
class has a typedef "r_import_type" then the following interface
is assumed and used. The corresponding class must have methods
int size() and r_import_type get(int). As usual further dispatch
is performed based on r_import_type (primitive, etc ...).
RcppArmadillo has an example of this for wrapping arma::field<T>
objects using the FieldImporter<T> class.
2010-02-18 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Language.h: added fixed_call to support STL algorithms
similar to generate.
* inst/unitTests/runit.Language.R: unit test for fixed_call
* src/Rcpp/Environment.h: Environment gains a find method
which searches for a binding in the associated environment
but also in all its parents, as opposed to get which just
looks in the environment.
2010-02-17 Dirk Eddelbuettel <edd@debian.org>
* src/Makevars: Simplified as RcppExample.cpp is shipped off
* src/Makevars.win: Simplified as RcppExample.cpp is shipped off
2010-02-17 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/SEXP_Vector.h : The lhs use of operator[](string) has
been improved so that if the name does not exist in the vector,
the vector grows.
* inst/unitTests/runit.GenericVector.R: new unit test
test.List.implicit.push.back about the new operator[](string)
* src/Rcpp/SimpleVector.h : new template class SimpleMatrix<int>
that derives from SimpleVector<int>, with typedefs NumericMatrix
IntegerMatrix, LogicalMatrix, RawMatrix, ComplexMatrix. The actual
functionality comes from SimpleVector but SimpleMatrix has
constructors and assignment operators that behave slighlty
differently : they check that their input is a matrix
* src/Rcpp/traits/wrap_type_traits: added support for float
* src/Rcpp/Rcpp.h: now including RObject here instead of in
RcppCommon.h because RObject is a client of implicit converters
(attr) and so we need to leave a hook for third party code, e.g.
RcppArmadillo
2010-02-16 Dirk Eddelbuettel <edd@debian.org>
* src/Makevars.wim: Applied improved version kindly supplied by Brian Ripley
* R/RcppExample.R, man/RcppExample.Rd: Moved to RcppExamples package
* man/RcppDate.Rd, man/RcppParams.Rd, man/RcppResultSet.Rd, RcppVector.Rd,
src/RcppExample.cpp: Idem
* inst/examples/FastLM: Slightly reworked, actual code factored out
and used in a per-library demo/test script and a joint benchmark.r
2010-02-15 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/FastLM: New example directory with two 'fast lm'
implementations using, respectively, GNU GSL (in C) and Armadillo
(in C++); Armadillo is seen as faster for lack of extra copying
2010-02-14 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Language.h: accepting Function in unary_call and
binary_call to support STL algorithms using R functions.
2010-02-14 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.7
* debian/*: Similarly updated for new release to Debian
2010-02-14 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Language.h: fixing serious bug. The 'code bloat'
constructors taking a std::string did not explicitely
create a symbol, so the created calls were wrong.
* src/Rcpp/Language.h: new template classes Rcpp::unary_call
and Rcpp::binary_call to allow use of Language objects
in STL algorithms.
* inst/unitTests/runit.Language.R: unit test and example
of using unary_call and binary_call
2010-02-12 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.6
* NEWS: Updated
* debian/*: Similarly updated for new release to Debian
2010-02-12 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/Environment.h: Environment gains a default
constructor. This is needed for RInside.
2010-02-10 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/SEXP_Vector.h: SEXP_Vector (and therefore
ExpressionVector and GenericVector, a.k.a List) gain
methods push_front, push_back and insert that are templated and
use the 'implicit wrap idiom' to add an element to the front
or, the back or an arbitrary (valid) position of the list,
pushing other elements. Internally the SEXP is actually copied.
* src/Rcpp/SEXP_Vector.h: SEXP_Vector gains an erase method
modelled after std::vector<>::erase to remove elements from
a list. erase has a single iterator (or int) form that removes
one element, and a range based version
erase(iterator first, iterator last) that erases all elements
between first and last.
* src/Rcpp/VectorBase.h: VectorBase gains a version of
offset to support retrieving the offset of a given name of a
vector: offset( const std::string& name)
* src/Rcpp/SimpleVector.h : uses the new offset to perform
names based indexing (FR #808)
* src/Rcpp/SEXP_Vector.h: same
* src/Rcpp/CharacterVector.h: same
* inst/unitTests/runit.GenericVector.R: unit tests for names
based indexing
* inst/unitTests/runit.IntegerVector.R: same
* inst/unitTests/runit.CharacterVector.R: same
2010-02-09 Dirk Eddelbuettel <edd@debian.org>
* inst/skeleton/Makevars: Use $R_HOME/bin indirection
* inst/skeleton/Makevars.win: Idem
2010-02-09 Romain Francois <romain@r-enthusiasts.com>
* src/Rcpp/SEXP_Vector.h: The functionality of SEXP_Vector
that was independent of the template parameter was factored out
into a new base class SEXP_Vector_Base. This follows the advice
of item 44 of Effective C++.
* src/Rcpp/SEXP_Vector.h: SEXP_Vector_Base::iterator is introduced
as well as methods begin() and end() to support use of stl
algorithms on lists.
* inst/unitTests/runit.GenericVector.R: new unit test for
testing SEXP_Vector_Base::iterator and illustrating a c++
version of lapply using std::transform
* src/Rcpp/CharacterVector.h: CharacterVector gains a random
access iterator, begin() and end() to support STL algorithms.
The iterator dereferences to a StringProxy
* src/Rcpp/RObject.h: remove RObject::asFoo methods which were
deprecated in Rcpp 0.7.5. The alternative is to use Rcpp::as<Foo>
2010-02-08 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.5
* debian/*: Similarly updated for new release to Debian
2010-02-07 Romain Francois <francoisromain@free.fr>
* src/RcppSexp.h: class RcppSexp removed (was deprecated)
* src/Rcpp/*.h: defaults copy constructors and assignment
operators have been added for all classes extending RObject.
Otherwise the compiler generates default versions that circumvent
the garbage collection management
2010-02-06 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/functionCallback/newApiExamples.r: Added simpler
version using the new API
* inst/examples/functionCallback/newApiExamples.r: Updated
* inst/unitTests/runit.RcppVector.R: added test for NA/NaN
* inst/unitTests/runit.RcppMatrix.R: idem
2010-02-06 Romain Francois <francoisromain@free.fr>
* src/Rcpp/RObject.h : asFoo methods are deprecated.
* src/Rcpp/DottedPair.h : using R_len_t instead of int
to anticipate future changes in R
* src/Rcpp/VectorBase.h: idem
* src/DottedPair.cpp: idem
* src/VectorBase.cpp: idem
* src/as.cpp: idem
* src/Rcpp/SimpleVector.h: SimpleVector is now only parameterized
by the SEXP type. The c type is automatically retrieved using
the storage_type trait class.
2010-02-05 Dirk Eddelbuettel <edd@debian.org>
* inst/THANKS: Added in order to show our appreciation
2010-02-04 Romain Francois <francoisromain@free.fr>
* src/Rcpp/DottedPair.h: code bloat to allow creation of
DottedPair containing up to 5 objects without variadic templates
RInside for example needs this.
* src/Rcpp/Language.h: same
* src/Rcpp/Pairlist.h: same
* src/Rcpp/grow.h: same
* src/Rcpp/internal/wrap.h : one more level of dispatch to
identify if there needs a cast between the primitive
iterated over and the target storage type. For example
size_t needs a cast to be stored in an integer vector. This
will be useful for the RProtoBuf package with e.g. types like
google::protobuf::int64 which needs to be cast to double.
Consequently the special handling of bool has been withdrawn
as bool can now be assimilated to a primitive type that does
require casting (to int)
2010-02-03 Romain Francois <francoisromain@free.fr>
* src/Rcpp/VectorBase.h: VectorBase gains a names method that
uses the proxy pattern to get or set the names of a vector
* src/Rcpp/DottedPair.h: DottedPair gains a << operator to
add an object to the queue of the list. this is much useful
when variadic templates are not available
* src/Rcpp/RObject.h: support for slot assignment. The slot
method now uses the proxy pattern.
* inst/unitTests/runit.S4.R: unit test for slot assignment
2010-02-02 Romain Francois <francoisromain@free.fr>
* src/internal/r_coerce.h : coercion is now handled by a templated
function r_coerce<int,int>, for example r_coerce<INTSXP,REALSXP>
takes an int, performs coercion and returns a double
* src/traits/has_iterator.h : introduce a trait that uses the
SFINAE idiom to check if a class T has a nested type called
"iterator". This helps wrap dispatch which now uses the
range based wrap implementation in that case
* src/Rcpp/wrap.h: The range based wrap function is exposed
at the Rcpp:: level. The interface is
wrap( InputIterator first, InputIterator last )
and dispatch is performed internally using iterator traits
2010-02-01 Romain Francois <francoisromain@free.fr>
* src/traits/wrap_type_traits.h: new namespace Rcpp::traits::
to host Rcpp type traits used by the template meta programming
dispatching of wrap
2010-01-31 Dirk Eddelbuettel <edd@debian.org>
* doxyfile: several updates plus improvements related to examples/
* src/RcppDoxygenExamples.h: A phony empty file needed mainly to
define a few \example tags for Doxygen
2010-01-31 Romain Francois <francoisromain@free.fr>
* src/Rcpp/internal/wrap.h: more wrap for stl templates are
candidate for wrap (when T can be wrapped)
std::list<T> -> vector or list
std::multiset<T> -> vector or list
std::map<std::string,T> -> named vector or named list
std::multimap<std::string,T> -> named vector or named list
std::tr1::unordered_map<std::string,T> -> named vector or named list
std::tr1::unordered_set<T> -> vector or list
std::tr1::unordered_multiset<T> -> vector or list
* inst/unitTests/runit.wrap.R : unit tests for the new
wrappable types
2010-01-30 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.4
* debian/*: Similarly updated for new release to Debian
* inst/unitTests/runit.RcppMatrix.R: also test STL return
* inst/unitTests/runit.RcppVector.R: added
2010-01-30 Romain Francois <francoisromain@free.fr>
* src/Rcpp/internal/wrap.h: rework wrap using traits and
template meta programming. wrap is now really a template
and has many generated specializations. This file is
a private header and should only be included by RcppCommon.h
* src/Rcpp/Language.h: Language gains Function aware constructors
and eval methods
2010-01-28 Romain Francois <francoisromain@free.fr>
* src/Rcpp/DottedPair.h: DottedPair::Proxy are no more lazy, i.e
traversal of the pair list happens at construction time, so
that the proxy can be created once and used many times more
efficiently.
* src/Rcpp/DottedPair.h: Pairlist and Language are now derived
from the new virtual class DottedPair since both class were
almost identical
* src/Rcpp/SimpleVector.h: simple vectors gain a range
based assign method and a range based assign constructor
* inst/unitTests/runit.IntegerVector.R: new unit test
test.IntegerVector.range.constructors
* src/Rcpp/Dimension.h: new class Rcpp::Dimension to support
creation of vectors with dimensions
* src/Rcpp/*Vector.h: using Rcpp::Dimension
* src/Rcpp/SimpleVector.h: data is initialized with 0 when
the object is constructed from size or Dimension constructor
* inst/unitTestsrunit.CharacterVector.R: new unit test to test
constructors using Dimension
* inst/unitTests/runit.IntegerVector.R: idem
* inst/unitTests/runit.GenericVector.R: idem
* R/unit.tests.R: new unexported function "test" to trigger
unit tests using installed test cases
* src/Rcpp/CharacterVector.h: minor bug fix in assign
* inst/unitTest/runit.RcppResultSet.R: compare time using
as.numeric to avoid timezone problems
2010-01-27 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.RcppMatrix.R: added
* inst/unitTests/runit.RcppMatrixView.R: added
* inst/unitTests/runit.RcppVector.R: added
* inst/unitTests/runit.RcppVectorView.R: added
2010-01-27 Romain Francois <francoisromain@free.fr>
* src/Rcpp/CharacterVector.h: CharacterVector gains a default
constructor
* src/Rcpp/CharacterVector.h: CharacterVector gains range
constructors and range based assign methods facilitating
construction from iterators
* inst/unitTests/runit.CharacterVector.R: unit tests for assign
and range based constructors
* src/Rcpp/CharacterVector.h: CharacterVector::StringProxy
gets a printing operator <<(std::ostream& )
* src/Rcpp/Environment.h: removed the static
Environment::RCPP_NAMESPACE which caused problems when
embedding R
* src/Rcpp/RObject.h: RObject::AttributeProxy::operator RObject
replaced by templated implicit conversion operator, delegating the
actual work to as<>.
* src/Environment.h: Binding::operator RObject is removed since
it can be automatically generated by the templated implicit
conversion operator
* man/RcpUnitTests.Rd: fix html rendering
* inst/doc/Makefile: clean the index.html file before copying it
2010-01-26 Dirk Eddelbuettel <edd@debian.org>
* src/RcppDatetime.cpp: New SEXP-based constructor
* src/RcppDatetime.h: idem, bug fix for operator-
* src/RcppDate.h: new accessor getJulian() [relative to epoch
just like R's julian()] to complement getJDN()
* inst/unitTests/runit.RcppDatetime.R: added
2010-01-26 Romain Francois <francoisromain@free.fr>
* src/Rcpp/clone.h: explicit cloning of RObjects. The clone
template function creates a new object of the same class
as the object it is passed in, encapsulating a duplicate
of the SEXP contained by the input RObject.
* src/Rcpp/r_cast.h: new template function to handle casts
from one SEXP to another. This is mostly useful internally
* src/Rcpp/VectorBase.h: VectorBase gains a offset method
that is responsible to calculate the correct offset based
on variable number of size_t arguments. currently the number
of arguments can be 1 (vector indexing) and 2 (matrix indexing)
but arbitrary number of arguments will be added later
for arbitrary array-like indexing.
* src/Rcpp/SimpleVector.h: outsourcing offset calculation
to VectorBase::offset
* src/Rcpp/CharacterVector.h: use offset to implement matrix-like
indexing for matrices of strings
* inst/unitTests/runit.CharacterVector.R: unit test for matrix
indexing (test.CharacterVector.matrix.indexing)
* inst/Rcpp/SEXP_Vector.h: use offset to implement matrix like
indexing on lists
* inst/unitTests/runit.GenericVector.R: unit test for matrix
indexing (test.List.matrix.indexing)
2010-01-26 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.RcppDate.R: added
2010-01-25 Romain Francois <francoisromain@free.fr>
* src/Rcpp/wrap.h: wrap is back at being a template. The
template parameter T is first converted to SEXP implicitely
and the wrap(SEXP) method is used. This allows clients to only have to
implement an implicit conversion to SEXP operator for their class
and have wrap for free.
* src/Rcpp/SEXP_Vector.h: factored out ExpressionVector and
GenericVector into a templated SEXP_Vector class parameterized
by the SEXP type (VECSXP or EXPRSXP). GenericVector and
ExpressionVector now are generated from the template. This will
ease adding features to both classes.
* src/as.cpp: also use coercion for as<bool>, as<int>, as<double>
as<Rbyte> (FR #768)
* src/Rcpp/as.h: smarter template as<T>, now the template
attempts to create an object by passing the SEXP as the first
parameter, so any class that has a constructor taking a SEXP
can be as<>'ed. see item below for how this can be useful
* src/Rcpp/Environment.h: lhs use of Environment::Binding is now
a bit smarter and uses as<> to implicitely convert the SEXP
to the requested type, so that if as<Foo> makes sense, this
works: Foo foo = env["x"] ;
* src/Rcpp/Environment.h: Environment::assign gains a templated
form so that we can assign anything that can be wrapped to
a name in an environment.
* inst/unitTests/runit.environments.R: new unit test
'test.environment.assign.templated' to test the templated assign
* src/Makevars(.win?): listen to the RCPP_CXX0X environment variable
and if set to "yes" attempt to add c++0x support if possible
2010-01-24 Dirk Eddelbuettel <edd@debian.org>
* configure.in: Withdrawn as OS X universal binaries are only built
when there is src/Makevars and neither src/Makefile nor configure
* configure: idem
* src/Makevars: Again a static file, content copied from Makevars.in,
-std=c++0x selection back to simply unabling a comment
2010-01-24 Romain Francois <francoisromain@free.fr>
* src/SimpleVector.h : new template to replace simple vector
classes. now NumericVector, IntegerVector, LogicalVector,
ComplexVector and RawVector are all generated from the same
template class. A first attempt at matrix indexing is added
as part of this.
* inst/unitTests/runit.NumericVector.R: new unit tests about
matrix indexing
* src/Rcpp/VectorBase.h: added the exception not_a_matrix
that is thrown when attempting to perform matrix indexing on
a vector that is not a matrix.
2010-01-23 Dirk Eddelbuettel <edd@debian.org>
* inst/unitTests/runit.RcppParams.R: added
* inst/unitTests/runit.RcppResultSet.R: added
2010-01-23 Romain Francois <francoisromain@free.fr>
* src/wrap.cpp: s/copy/std::copy/
* src/RcppDateTime.h: explicitely include <time.h> (win64 warning)
2010-01-22 Romain Francois <francoisromain@free.fr>
* src/Makevars.win: disable c++0x entirely (for now)
* src/Rcpp/Environment.h: make sure what() is const. (suncc finding)
* src/RcppCommon.h: pre declare classes, as an attempt to
deal with the suncc warning "RObject may not have a type qualifier."
* src/Rcpp/*.h: make sure RcppCommon.h is the first included header
* src/*cpp: make sure foo.cpp only include Rcpp/foo.h
* src/Environment.cpp: use Evaluator instead of R_ToplevelExec
* src/RcppFunction.{h,cpp}: listen to some suncc warnings
* src/RcppFrame.cpp: listen to some suncc warnings
* src/as.cpp: use transform instead of assign, which should
make the code more portable (particularly suncc) and also
deal with coercion
2010-01-21 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.3
* debian/*: Similarly updated for new release to Debian
* INDEX: updated
* configure.in: Some more small cleanups
* inst/skeleton/Makevars.win: Add missing default file
2010-01-21 Romain Francois <francoisromain@free.fr>
* configure.in: Some small cleanups, add RCPP_CXX0X env var
2010-01-20 Romain Francois <francoisromain@free.fr>
* src/*: make update private virtual in RObject and couple it with
setSEXP so that it gets called automatically, instead of manually
* src/*: move more code depending on c++0x from cpp files to header
files
2010-01-20 Dirk Eddelbuettel <edd@debian.org>
* configure.in: Detect C++ capabilties (via g++ major/minor) via
small C++ program embedded in autoconf macro
2010-01-19 Romain Francois <francoisromain@free.fr>
* configure.in: use the cxx0x.R script to discover if the
compiler being used is c++0x capable
* configure: regenerated from updated configure.in
* src/Makevars.in: using CLINK_CPPFLAGS variable
* src/Makevars.win: using CLINK_CPPFLAGS variable with the
cxx0x.R discovery script
2010-01-18 Dirk Eddelbuettel <edd@debian.org>
* R/RcppLdpath.R: Rewrote logic for LdFlags() to decide when linking
is static: default now is everywhere but Linux, and choices can be
overriden as before
2010-01-18 Romain Francois <francoisromain@free.fr>
* inst/discovery/cxx0x.R: replaces the cxx0x.c file to take
care of compiling, etc...
2010-01-17 Romain Francois <francoisromain@free.fr>
* src/exceptions.cpp: slightly less dumb exception logic
on non GCC compilers. exceptions will now trigger an R error
with a default message (we don't attempt to get the
exception class or message because we don't know how to)
* src/Rcpp/Pairlist.h: Pairlist lacked a default constructor
which is needed when the variadic templates are not
available
* inst/unitTests/*: add -std=c++0x in inline when necessary
* R/RcppLdPath.R : new script RcppCxx0xFlags() and Cxx0xFlags()
that compile, load and call a simple C file in order to check
the compiler version and add the -std=c++0x flag
* inst/discovery/cxx0x.c: discovery script. simple C script that
returns "-std=c++0x" if it is compiled with GCC >= 4.3 and
"" otherwise
2010-01-16 Dirk Eddelbuettel <edd@debian.org>
* src/Rcpp/*h: call Rf_length() etc as ::Rf_length() to ensure we get
the one from the top-level namespace
2010-01-16 Romain Francois <francoisromain@free.fr>
* src/Rcpp/Environment.h: Environment gains a new_child method
to create an environment enclosed by this
* inst/unitTests/runit.environments.R: unit test for new_child
* src/Rcpp/ExpressionVector.h: ExpressionVector gains a
convenience methods eval to evaluate itself
* inst/unitTests/runit.ExpressionVector.R: added unit tests
for ExpressionVector::eval
* src/Rcpp/ExpressionVector.h: ExpressionVector gains a
constructor ExpressionVector( const std::string& ) that
parses the string as R code
* inst/unitTests/runit.ExpressionVector.R: added unit tests
to cover the new constructor
* src/Rcpp/Environment.h : the Rcpp namespace is cached because
we use it in many places and retrieving it is an "expensive"
operation that requires a round trip to the R side
* src/Evaluator.cpp: use the cached Rcpp namespace
* R/Rcpp.package.skeleton: now generating example C++ and R
code that uses Rcpp, also the generated Makevars contains
a hack so that the generated package can pass check (after
edition of Rd files, NAMESPACE, etc ...)
* inst/skeleton: added example code used by the skeleton
generator
2010-01-15 Romain Francois <francoisromain@free.fr>
* src/Rcpp/NumericVector.h: cache the start of the array to
improve performance of operator[]
* src/NumericVector.cpp: idem
* src/Rcpp/IntegerVector.h:
* src/Rcpp/RawVector.h:
* src/Rcpp/ComplexVector.h:
* src/Rcpp/LogicalVector.h: idem
* src/IntegerVector.cpp:
* src/RawVector.cpp:
* src/ComplexVector.cpp:
* src/LogicalVector.cpp: idem
2010-01-13 Romain Francois <francoisromain@free.fr>
* R/cpp.package.skeleton.R: new function cpp.package.skeleton
to extend the code generation performed by package.skeleton
to Rcpp features
* man/cpp.package.skeleton.Rd: documentation for cpp.package.skeleton
* src/Rcpp/VectorBase.h: new virtual class Rcpp::VectorBase
to manage common things of all vectors (length, names, etc ...)
all Vector classes now derive from VectorBase
* src/Rcpp/Environment.h: Environment::Binding gains a templated
conversion operator, to facilitate distance 2 implicit conversion
making this possible:
Environment env("package:stats") ;
Function f = env["rnorm"] ;
* src/Rcpp/GenericVector.h: GenericVector::Proxy gains an
assignement operator to deal with Environment::Binding. This is
to work around distance 1 implicit conversion restrictions
* src/Rcpp/NumericVector.h: operator[], begin and end are
promoted to inline member functions
* src/Rcpp/IntegerVector.h: idem
* src/Rcpp/RawVector.h: idem
* src/Rcpp/LogicalVector.h: idem
2010-01-12 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.2
* debian/*: Similarly updated for new release to Debian
* .Rbuildignore: Add 'inst/doc/{html,latex,man} as we no
longer ship the voluminous doxygen-generated content
* inst/doc/examples/ConvolveBenchmarks/convolve2*: Added simple
benchmark on the well-known vector convolution example from
'Writing R Extensions' to compare C and C++ implementations
* inst/doc/examples/ConvolveBenchmarks/buildAndRun.sh: idem
inst/doc/examples/ConvolveBenchmarks/exampleRCode.r: idem
2010-01-12 Romain Francois <francoisromain@free.fr>
* inst/doc/examples/ConvolveBenchmarks/convolve2*: Added additional
C++ examples to convolution benchmark highlighting performance gains
2010-01-11 Romain Francois <francoisromain@free.fr>
* src/Rcpp/CharacterVector.h: StringProxy gains operator+=
* src/CharacterVector.cpp: implementation
* src/Rcpp/*Vector.h: operator[] now throws index out of bounds
exception when needed (FR#770)
* src/*Vector.cpp: same
* src/Rcpp/Environment.h: operator[](string) for environment
allowing to get/set values of a binding in this environment.
The Environment::Binding class has been created to act as
a proxy.
* src/Environment.cpp: idem
* inst/unitTests/runit.environments.R: unit tests for the above
2010-01-10 Romain Francois <francoisromain@free.fr>
* src/Rcpp/Pairlist.h: operator[] for pairlist using proxies
* src/Pairlist.cpp : idem
* inst/unitTests/runit.Pairlist.R: new unit tests
* src/Rcpp/Language.h: same for Language
* src/Language.cpp : idem
* inst/unitTests/runit.Language.R: new unit tests
* inst/unitTests/runit.Function.R: added unit test for function
throwing exceptions
* src/Function.cpp: grab the condition message and not the call
2010-01-09 Romain Francois <francoisromain@free.fr>
* src/Rcpp/RObject.h: attr can now be used to get or set the
attribute (used to be read only). This is another manifestation
of the proxy pattern. The rhs can be anything wrap can handle
* inst/unitTests/runit.RObject.R: added test.RObject.attr.set
unit test (setting attribute).
* src/Rcpp/Function.h: Function::operator() now throws an
exception if an R error occurs.
2010-01-08 Dirk Eddelbuettel <edd@debian.org>
* configure.in: provide basic support for c++ compiler version detection
at build-time so that we can add -std=c++0x when applicable;
provide defaults in case we do not use g++
* src/Makevars.in: copied from Makevars, set C++ flags from configure
* configure.win: simply log what g++ version is being used
2010-01-08 Romain Francois <francoisromain@free.fr>
* src/Rcpp/wrap.h: added wrap( size_t ) to disambiguate it
* int/unitTests/runit.XPTr.R: forgot to set the finalizer on the
external pointer
* src/Rcpp/Pairlist.h: Pairlist gains a push_back, replace,
length, size, remove and insert methods
* src/Rcpp/Language.h: idem for Language
2010-01-07 Romain Francois <francoisromain@free.fr>
* src/Rcpp/Pairlist.h: gains a push_front method
* src/Rcpp/wrap.h : now the result type of the various wrap
functions depends on the parameters. wrap( bool ) makes a
LogicalVector, etc ... wrap(SEXP) dispatches to the
appropriate Rcpp:: class depending on TYPEOF
* src/Rcpp/RObject.h: added methods "isS4", "slot"
and "hasSlot" to deal with S4 objects
* inst/unitTests/runit.S4.R: unit tests
* src/Rcpp/ComplexVector.h: new class Rcpp::ComplexVector
to manage ... complex vectors (CPLXSXP)
* src/ComplexVector.cpp: implementation
* inst/unitTests/runit.ComplexVector.R: unit tests
* src/Rcpp/Promise.h: new class Rcpp::Promise to manage
promises (PROMSXP). only read access so far (no way to force
the promise)
* src/Promise.cpp: implementation
* src/Rcpp/RObject.h: the result of attr is now an RObject
rather than a SEXP. This does not change previous behavior
because of the implicit conversion
* src/Rcpp/ExpressionVector.h: new class Rcpp::ExpressionVector
which shares a lot with GenericVector.
* src/ExpressionVector.cpp: implementation
* inst/unitTests/runit.ExpressionVector.R: unit tests
* src/Rcpp/CharacterVector.h: new class Rcpp::CharacterVector
to manage character vectors (STRSXP). StringVector is a
convenience typedef equivalent to CharacterVector
* src/CharacterVector.cpp: implementation
* inst/unitTests/runit.CharacterVector.R: unit tests
* src/Rcpp/WeakReference.h: new class Rcpp::WeakReference
to wrap WEAKREFSXP with accessors to the key and value
* src/WeakReference.cpp: implementation
* src/Rcpp/Rcpp_Rinternals.h: borrowed from Rinternals so that
we can use VECTOR_PTR (which R forbids unless we define
USE_RINTERNALS, but defining it disables NO_R_REMAP)
* src/Rcpp/GenericVector.h : added begin and end to allow
stl type iteration over generic vectors. Now using the
Proxy pattern (from Item 30 of More Effective C++) to
allow getting and setting the elements of the list through
the operator[].
* int/unitTests/runit.GenericVector.R: examples are reworked
using [] where set and get were used.
2010-01-06 Dirk Eddelbuettel <edd@debian.org>
* src/RcppCommon.h: Protect definition of logTxt by #ifndef
* inst/doc/Rcpp-unitTests.Rnw: Minor LaTeX tweak
2010-01-06 Romain Francois <francoisromain@free.fr>
* src/Rcpp/wrap.h : wrap can now use initializer lists (available
on on GCC >= 4.4).
* src/wrap.cpp: implementation
* int/unitTests/runit.wrap.R: unit tests
* src/RObject.cpp : make methods RObject::asFoo
calling Rcpp::as<Foo> to avoid code duplication
2010-01-05 Romain Francois <francoisromain@free.fr>
* src/Rcpp/GenericVector.h : new class Rcpp::GenericVector
and an alias Rcpp::List to handle lists (VECSXP), aka generic
vectors
* src/GenericVector.cpp : implementation
* inst/unitTests/runit.GenericVector.R: unit tests
* src/Rcpp/IntegerVector.h : new class Rcpp::IntegerVector
to manage integer vector (INTSXP). IntegerVector can be
constructed from SEXP of appropriate type, from an int which
simply allocates a vector that big, or using an
initialization list (the last is GCC >= 4.4 only).
Additionally IntegerVector defines begin() and end() so that
they can be used in STL algorithms
* src/IntegerVector.cpp : implementation
* inst/unitTests/runit.IntegerVector.R: unit tests
* src/Rcpp/NumericVector.h : same as above, but for numeric
vectors (REALSXP)
* src/NumericVector.cpp : implementation
* inst/unitTests/runit.NumericVector.R: unit tests
* src/Rcpp/RawVector.h : same as above, but for numeric
vectors (RAWSXP)
* src/RawVector.cpp : implementation
* inst/unitTests/runit.RawVector.R: unit tests
* src/Rcpp/LogicalVector.h : same as above, but for numeric
vectors (RAWSXP)
* src/LogicalVector.cpp : implementation
* inst/unitTests/runit.LogicalVector.R: unit tests
* src/RcppCommon.h: improve the conditional compiling logic
with macros HAS_VARIADIC_TEMPLATES and HAS_INIT_LISTS instead
of CXX0X. This ensures the package can be compiled with
older GCC, with lower functionality
* src/RcppCommon.{h,cpp}: added a capabilities function that
can be used to bring the result of the two above macros to R
* R/RcppLdPaths.R: added unexported function RcppCapabilities
to call the internal capabilities. capabilities is an alias
to RcppCapabilities so that we can call Rcpp::capabilities()
2010-01-04 Romain Francois <francoisromain@free.fr>
* src/Rcpp/Function.h: new class Rcpp::Function to manage functions
(closures, primitives and builtins) all share the Function class
(at least for now). This is implemented as a functor taking
variable number of arguments, so it looks pretty similar to the
R function
* src/Function.cpp: implementation
* inst/unitTests/runit.Function.R: unit tests
* src/Rcpp/Pairlist.h: new class Rcpp::Pairlist to manage dotted
pair lists (LISTSXP). unsurprisingly this shares a lot of
similarities with Language class
* src/Pairlist.cpp: implementation
* inst/unitTests/runit.Pairlist.R: unit tests for Rcpp::Pairlist
* src/Rcpp/wrap.h: wrap no more a template. this was not a good
idea as it prevented implicit conversion to SEXP behavior when
wrap'ing a RObject.
* src/Rcpp/Environment.h: added the remove method
* src/unitTests/runit.environments.R: remove unit test
* src/unitTests/runit.Language.R: remove verbose=TRUE in cfunction
call (generated noise)
* src/wrap.cpp: added a few missing PROTECT
2010-01-04 Dirk Eddelbuettel <edd@debian.org>
* src/excections.cpp: Get rid of another unused variable
* src/RcppCommon.cpp: Idem
2010-01-03 Romain Francois <francoisromain@free.fr>
* src/Rcpp/Environment.h: Environment gains the parent
method that returns the parent environment
* src/Rcpp/as.h: template as<> to convert SEXP to classic
C++ types, factored out of RObject
* src/as.cpp: specific implementations. as<int>, as<bool>
as<string>, ...
* inst/unitTests/runit.as.R: unit tests
* src/Rcpp/wrap.h : factored out from RObject. there is now a
template wrap in addition to the specific implementations. The
template generates a warning and return NULL
* src/wrap.cpp: specific implementations of the wrap template
(factored out of RObject)
* src/Rcpp/pairlist.h : variadic templates to
recursively generate a pairlist
(CAR and CDR) from any number of "wrap("'able objects.
(factored out of Language)
* src/pairlist.cpp: end of recursion for the above
* src/Rcpp/grow.h : grow a pairlist with any wrappable
object. Used in pairlist
* src/grow.cpp : specific implementation for Named object
to allow tagging the head of the pairlist.
* src/Rcpp/Named.h : new class Named that is used to specify
named elements in a pairlist.
* src/Named.cpp: implementation
* src/Rcpp/RObject.h: added wrap(const char* const) RObject factory
method
* src/Rcpp/RObject.h: rework the garbage collection mechanism so that
it is automatic and hidden. methods preserve and release are now
private to the RObject class and the SEXP may only be changed using
the protected setSEXP member function. isPreserved and forgetPreserve
are defunct.
* src/Rcpp/RObject.h: RObject gains assignment operators and copy constructors
* src/RcppCommon.h: added the CXX0X define that controls whether
we can use C++0x features offered by the gcc. currently the define
is hardcoded, but this will eventually be a configure guess. The
canUseCXX0X function can be called to bring this back to R
* R/RcppLdPath.R: added the canUseCXX0X R function to query
the internal canUseCXX0X function, use this in RcppCxxFlags so that
code linking against Rcpp (inline code or packages) can take
advantage of it
* src/Rcpp/Language.h : new class Rcpp::Language to manage calls
(LANGSXP SEXP)
* src/Language.cpp : implementation
* inst/unitTests/runit.Language.R: unit tests
* src/Rcpp/Environment.h : added constructors and made the SEXP based
constructor smarter (using as.environment)
* inst/unitTests/runit.environments.R: more unit tests
* src/Rcpp/Symbol.h: new class Rcpp::Symbol to encapsulate
symbols. This allows to use Symbol("rnorm") instead of the most cryptic
Rf_install("rnorm")
* src/Symbol.cpp: implementation
* inst/unitTests/runit.Symbol.R: unit tests
2010-01-03 Dirk Eddelbuettel <edd@debian.org>
* doxyfile: updated to current doxygen standard using -u
2010-01-02 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.1
* debian/*: Similarly updated for new release to Debian
2010-01-02 Romain Francois <francoisromain@free.fr>
* pkg/src/RcppSexp.h: Added to preserve existing interface,
implementation use the redesigned class src/RObject.h
2010-01-01 Romain Francois <francoisromain@free.fr>
* pkg/src/Rcpp/RObject.h: RObject::RObject constructors are
replaced by the Rcpp::wrap set of functions. Currently the wrap
functions make a RObject object but it is likely that as new
classes become available in the new API, wrap will return
instances of classes that extend RObject.
* pkg/src/Rcpp/RObject.h: s/protect/preserve/, added methods
isPreserved and forgetPreserve
* ** : adapted examples, code, and unit tests to reflect both
above items
2009-12-31 Romain Francois <francoisromain@free.fr>
* src/Rcpp/Evaluator.h : new class Rcpp::Evaluator that eases
evaluation of R expression with error capture. so that we can for example
throw C++ exceptions
* src/Evaluator.cpp : implementation of Rcpp::Evaluator
* inst/unitTests/runit.evaluator: unit tests of Rcpp::Evaluator
* inst/Rcpp/RObject.h: RObject::RObject(SEXP) now initializes isProtected
* inst/src/Environment.cpp: use of exceptions
2009-12-30 Romain Francois <francoisromain@free.fr>
* src/Rcpp/Environment.h : added support for environment through the
Rcpp::Environment class
* src/Environment.cpp: idem
* inst/unitTests/runit.environments.R: testing the above
* src/RcppCommon.h: now includes <R_ext/Callbacks.h>, needed for the
environment support
2009-12-30 Romain Francois <francoisromain@free.fr>
* src/Makevars* : adapt for allowong copy of the Rcpp directory
* src/Rcpp_RObject.h: replace by src/Rcpp/RObject.h
* src/Rcpp_XPtr.h: replaced by src/Rcpp/XPtr.h
* src/*.cpp: adapt to the Rcpp directory
* cleanup: idem
2009-12-30 Romain Francois <francoisromain@free.fr>
* inst/unitTests/runit.RObject.R: new unit tests
* inst/unitTests/runit.exceptions.R: idem
* inst/unitTests/runit.XPtr.R: idem
* man/RcppUnitTests.Rd: shows and link unit test reports generated at
build time
2009-12-29 Romain Francois <francoisromain@free.fr>
* src/Rcpp_RObject.{h,cpp}: new namespace Rcpp and new class
Rcpp::RObject to replace RcppSexp with the same functionality.
* src/Rcpp_XPtr.h: replaces RcppXPtr.h and the class is now
Rcpp::XPtr<> and extends Rcpp::RObject
* inst/examples/RcppInline/external_pointer.r: use the new namespace
* inst/examples/RcppInline/RcppInlineWithLibsExamples.r: idem
* inst/examples/RcppInline/RcppSexpTests.r: idem
* DESCRIPTION: marked as version 0.7.0.5
* inst/doc/*: fake (empty) vignette and unit test trigger
* inst/unitTests/*: prepare the space for unit tests
* tests/doRUnit.R : added the usual RUnit tests trigger
2009-12-29 Romain Francois <francoisromain@free.fr>
* src/RcppXPtr.h: now RcppXPtr extends RcppSexp and RcppSexp manages
garbarge collection, attributes, etc ...
* src/exceptions.cpp: replaces src/exception_handling.cpp
* DESCRIPTION: now suggesting RUnit.
2009-12-29 Romain Francois <francoisromain@free.fr>
* src/RcppXPtr.h: added operator SEXP() to class
RcppXPtr to ease implicit conversion from RcppXPtr to SEXP.
This means we can directly return the RcppXPtr object to R when the
return type of the function is SEXP. (no need to explicitely call
asSexp anymore)
* src/RcppSexp.{h,cpp} : idem
2009-12-29 Romain Francois <francoisromain@free.fr>
* src/RcppXPtr.h: new smart external pointer wrapper. The RcppXPtr
template can be used to wrap a external pointer (SEXP) so that it
looks like the dumb pointer it is wrapping (as far as the * and ->
operator are concerned). The template parameter controls the type
of object that is wrapped by the pointer.
* src/Rcpp.h: importing the RcppXPtr.h header
* src/RcppExample.cpp: added an example of RcppXPtr usage
* inst/examples/RcppInline/external_pointer.r: added example using
the RcppXPtr template
* DESCRIPTION: marking this as 0.7.0.4
2009-12-28 Romain Francois <francoisromain@free.fr>
* R/exceptions.R: s/uncaught_cpp_exception/cpp_exception/ and added a
'class' argument to hold the class name of the C++ exception
(range_error, etc ...)
* inst/examples/RcppInline/UncaughtExceptions.r: extend examples to
show how to grab details of the C++ exception
* src/exception_handling.cpp: factored out from RcppCommon.cpp, now
able to grab the class name of the exception and its message.
2009-12-27 Dirk Eddelbuettel <edd@debian.org>
* R/RcppInline.R: Removed as we now use cfunction() from inline (>= 0.3.4)
* man/{RcppInline,internals}.Rd: idem
* NAMESPACE: removed entries related to cfunction and methods
* DESCRIPTION: Added 'Suggests: inline (>= 0.3.4)
* inst/examples/RcppInline/*R: Add library(inline) or require(inline)
2009-12-27 Romain Francois <francoisromain@free.fr>
* src/RcppCommon.{h,cpp} : added experimental uncaught exception
management
* R/zzz.R : added .onAttach, used to register the uncaught exception
management on package attach
* R/exceptions.R : added R side of the exception management, unexported
as it is only used by internal C++ code
* inst/examples/RcppInline/UncaughtExceptions.r: demo of the
uncaught exception system
* src/RcppSexp.{h,cpp} : added method isNULL to test if the
underlying SEXP is NULL
* src/RcppSexp.{h,cpp} : added some methods to deal with attributes
attributeNames : the names of the attributes as a vector<string>
hasAttribute : test whether the SEXP has the given attribute
attr : extract the attribute (might return NULL)
* src/RcppSexp.{h,cpp} : added RcppSexp(bool), RcppSexp(vector<bool>)
constructors and RcppSexp.asBool(), RcppSexp.asStdVectorBool() methods
* inst/examples/RcppInline/RcppSexpTests.r: examples/tests of the
above items
2009-12-26 Romain Francois <francoisromain@free.fr>
* src/RcppSexp.{h,cpp} : added std::set<{int,double,Rbyte,string}> as
accepted input type for the RcppSexp class (needed by RProtoBuf)
* inst/examples/RcppInline/RcppSexpTests.r: examples/tests of the above
2009-12-21 Romain Francois <francoisromain@free.fr>
* src/RcppSexp.{h,cpp} : support for raw vector added into RcppSexp
* inst/examples/RcppInline/RcppSexpTests.r: examples of raw vector
support
2009-12-20 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/RcppInline/RcppInlineWithLibsExamples.r: Minor
simplifications using new RcppSexp types, added third example
2009-12-19 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.7.0
* DESCRIPTION: Descrition fields reworded and expanded to explicitly
mention 'inlining' ability as well as simple SEXP support.
* src/RcppSexp.{h,cpp}: Switch to R_PreserveObject and R_ReleaseObject
with a big thanks to Romain for the most appropriate suggestion
* src/RcppSexp.{h,cpp}: Added converters for vectors of
int, double, and std::string vectors
* src/RcppResultsSetp.{h,cpp}: Added simple single SEXP return
* src/RcppCommon.{h,cpp}: Adding simple logging facility
* inst/examples/RcppInline/RcppSexpTests.r: expanded for new types
2009-12-18 Dirk Eddelbuettel <edd@debian.org>
* R/RcppInline.R: Another improvement for Rcpp use
* inst/examples/RcppInline/RcppSimpleExamples.r: Another simple case
2009-12-17 Dirk Eddelbuettel <edd@debian.org>
* R/RcppInline.R: Improved / simplified in light of getting it to
work on Windoze too so switched to setting env var explicitly;
also split into three args for CPPFLAGS, CXXFLAGS and LIBS
* man/RcppInline.Rd: Updated accordingly to reflect new args
* inst/examples/RcppInline/RcppInlineWithLibsExamples.r: Idem
2009-12-16 Dirk Eddelbuettel <edd@debian.org>
* src/RcppSexp.{h,cpp}: Added simple RcppSexp class for simple
conversion from and to single-element SEXPs -- currently limited
to int, double, std::string
* inst/examples/RcppInline/RcppSexpTests.r: Simple tests for this
2009-12-15 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: License changed to 'GPL (>= 2)'
* COPYING: Changed from LGPL 2.1 to GPL 2 (or later)
* src/*.{h,cpp}: Relicensed under GPL 2 (or later)
2009-12-13 Dirk Eddelbuettel <edd@debian.org>
* R/RcppInline.R: Extended to for additional header and library
arguments so that we can work with arbitrary other projects
* man/RcppInline.Rd: Added documentation for these arguments
* inst/examples/RcppInline/RcppInlineWithLibsExamples.r: New
examples using GNU GSL to show how to compile + link via inline
2009-12-11 Dirk Eddelbuettel <edd@debian.org>
* R/RcppInline.R: Imported function 'cfunction' from the inline
package, along with small patch to directly support Rcpp. The
inclusion may be temporary -- if our patch is integrated into
inline we may just depend on that package
* man/RcppInline.Rd: Imported from inline, plus change for Rcpp
* inst/examples/RcppInline/RcppInlineExample.r: Small example
taken from the 'Intro to HPC with R' tutorials
* R/RcppVersion.R: Removed as unused as redundant given read.dcf() in R
* man/RcppVersion.R: idem
* NAMESPACE: updated accordingly
* INDEX: idem
2009-11-18 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Add Dominick back into Authors per his new request
reversing his requests to be removed from last December
2009-11-17 Dirk Eddelbuettel <edd@debian.org>
* man/RcppParams.Rd: applied patch by Frank S. Thomas to fix example
2009-11-15 Dirk Eddelbuettel <edd@debian.org>
* src/RcppDateVector.{cpp,h}: Moved out of Rcpp.{h,cpp}
* src/RcppDatetimeVector.{cpp,h}: idem
* src/RcppFunction.{cpp,h}: idem
* src/RcppMatrix.{cpp,h}: idem
* src/RcppMatrixView.{cpp,h}: idem
* src/RcppNumList.{cpp,h}: idem
* src/RcppResultSet.{cpp,h}: idem
* src/RcppStringVector.{cpp,h}: idem
* src/RcppStringVectorView.{cpp,h}: idem
* src/RcppVector.{cpp,h}: idem
* src/RcppVectorView.{cpp,h}: idem
* src/RcppCommon.cpp: takes remaining utility function from Rcpp.cpp
2009-11-09 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.6.8
* src/RcppParams.{cpp,h}: Code reorginsation, moved out of Rcpp.{h,cpp}
* src/RcppDate.{cpp,h}: idem
* src/RcppDatetime.{cpp,h}: idem
* src/RcppCommon.h: New header file for common defines and includes
* src/Makevars{,.win}: Updated and generalised to reflect new files
2009-11-08 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.6.7
* man/RcppVector.Rd: Remove erraneous use of \R in \title{} section
noticed by the Rd parser in R-devel (with thanks to Kurt Hornik)
2009-11-06 Dirk Eddelbuettel <edd@debian.org>
* src/RcppList.{h,cpp}: Added a simple class to accept list()
objects in order to cope with non-rectangular data-types -- this
comes from the RProtoBuf code currently only on r-forge where
we need accept lists that are potentially nested.
The API for RcppList is not fully fleshed out and needs a few
more append() member functions. Also length is currently fixed.
* cleanup: Change header file removal to Rcpp*.h
* inst/README: Added short README about history and status
* inst/doc/: Updated doxygen documentation
2009-09-29 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/functionCallback/*: Added simple C++ / R example of
defining an R function that is passed to and called from C++
2009-08-03 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.6.6
* src/Rcpp.{h,cpp}: Added exists() method for RcppParams to test
for existence of a named parameter.
* inst/doc/: Updated doxygen documentation
2009-04-01 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.6.5
* COPYING: Added
2009-03-30 Dirk Eddelbuettel <edd@debian.org>
* src/Makevars: Add $(R_ARCH) to target directory path when copying
the header file as an OS X user reported not finding it with
default settings.
2009-03-01 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.6.4
* .Rbuildignore: Added to exclude debian/ from source tarball
2009-02-25 Dirk Eddelbuettel <edd@debian.org>
* src/Makevars.win: Renamed from Makefile.win, added missing mkdir
* cleanup: Remove a few more Windows files
2009-02-24 Dirk Eddelbuettel <edd@debian.org>
* inst/doc/{html,latex,man}: Added new documentation of the C++ classes
* doxyfile: Added Doxygen configuration file for doc generation
2009-02-22 Dirk Eddelbuettel <edd@debian.org>
* src/Rcpp.{h,cpp}: cleaner use of namespace 'std' by formal prefix
rather than via 'using namespace std'
* src/Rcpp.h: define R_NO_MAP and use Rf_* form of R API functions
2009-02-18 Dirk Eddelbuettel <edd@debian.org>
* src/Rcpp.{h,cpp}: Added a few explicit casts, and removed unused
loop variable; all to make 'g++ -Wall' happy
2009-02-10 Dirk Eddelbuettel <edd@debian.org>
* src/Rcpp.{cpp,h}: Expanded a few of the throw() messages
2009-01-09 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.6.3
* R/RcppLdpath.R: Also defined shorter functions CxxFlags() and
LdFlags() which cat() the longer forms RcppCxxFlags() and
RcppLdFlags() to further simplify use via litter or Rscript in
Makefile or Makevars
* man/Rcpp-package.Rd: Mention short form CxxFlags() and LdFlags()
* src/Makevars: Applied another build correction for OS X suggested
by Simon Urbanek
* src/Rcpp.{cpp,h}: Added 'view-only' classes RcppVectorView,
RcppMatrixView and RcppStringVectorView contributed by David Reiss
2008-12-02 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.6.2
* R/RcppLdPath.R: Correct output for the default Linux case
2008-11-30 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.6.1
* src/Makevars: Added, replacing src/Makefile: thanks to Simon for a
rewrite that provides OS X support
* src/Makefile: Retired
* src/Makefile.win: Now build libRcpp.a instead of Rcpp.a
* src/Rcpp.{cpp,h}: Removed #ifdef statements related to QuantLib and
Date ops as we no longer need to split this off -- one build for all
uses; also added another date offset for the difference between the
Unix epoch of Jan 1, 1970 and what certain spreadsheets use (which is
what QuantLib) follows. With this change, Rcpp is completely
decoupled from QuantLib headers, yet can be used from QuantLib 0.2.10
or later. However, this also removes data conversion from R/Rcpp to
QL as Rcpp no longer 'knows' QL.
* R/RcppLdPath.R: Adds new functions RcppLdPath() to return lib/
directory path, and RcppLdFlags() to return arguments, including the
optional rpath settings on Linux
* R/RcppExample.R: Added new example 'RcppVectorExample()', extended
default print method for examples
* man/Rcpp-package.Rd: Expanded / updated documentation of package
use when building other packages
* cleanup: Removing static libraries too but do not remove src/Makevars
2008-11-05 Dirk Eddelbuettel <edd@debian.org>
* Release 0.6.0
* New maintainer
* src/Makefile{,.win}: New files, including functionality from both
configure and RcppSrc/Makefile; we now build two libraries, one for
use by the package which also runs the example, and one for users to
link against
* src/Makevars.in: Removed
* src/Rcpp.{cpp,h}: moved in from ../RcppSrc
* src/Rcpp.{cpp,h}: Add new type RcppDatetime corresponding to
POSIXct in with full support for microsecond time resolution
between R and C++
* man/*: Several new manual pages added
* configure{,.in,.win}: Removed as src/Makefile* can handle this more
easily
* DESCRIPTION: Minor cleanup and reformatting, Date: now uses
svn:keyword Date property
* NAMESPACE: Renamed RcppTemplateVersion to RcppVersion,
deleted RcppDemo
* demo/ directory removed as vignette("RcppAPI") is easier and more
reliable to show vignette documentation
* R/zzz.R: RcppTemplateDemo() removed, vignette("RcppAPI") is easier
* man/RcppTemplateDemo.Rd removed as well
* R/RcppExample.R: reindented, rewritten to set default arguments
* R/RcppTemplateVersion.R: renamed to RcppVersion.R
* man/RcppTemplateVersion.Rd: renamed to RcppVersion.Rd
* RcppSrc/Rcpp.{cpp,h}: moved to src/ directory
* RcppSrc/Makefile{,.win}: removed
* inst/doc/RcppAPI.{Rnw,pdf}: Added footnote onto titlepage about how
this document has not (yet) been updated along with the channges made
