https://github.com/cran/gdata
Tip revision: c617c4c6108778fdd6904e49f189c3acea912778 authored by Gregory Warnes on 30 January 2008, 00:00:00 UTC
version 2.4.0
version 2.4.0
Tip revision: c617c4c
ChangeLog
2008-01-29 11:26 arnima
* man/keep.Rd: Added argument 'all'.
2008-01-29 11:09 arnima
* R/keep.R: Added argument 'all'.
2007-10-22 02:24 warnes
* branches/GenerateFORMATSfromFactorObjects/SASxport/DESCRIPTION,
trunk/MSOfficeUtil/DESCRIPTION, trunk/RMCMC/DESCRIPTION,
trunk/Rlsf/DESCRIPTION, trunk/SASxport/DESCRIPTION,
trunk/bwRF/DESCRIPTION, trunk/exp.ssize/DESCRIPTION,
trunk/fork/DESCRIPTION, DESCRIPTION, trunk/gmodels/DESCRIPTION,
trunk/gplots/DESCRIPTION, trunk/gregmisc/DESCRIPTION,
trunk/ssize/DESCRIPTION: Clarify GPL version
2007-09-10 13:39 ggorjan
* man/upperTriangle.Rd: removed unmatched brace
2007-09-10 13:02 ggorjan
* man/gdata-package.Rd: adding alias
2007-09-06 14:06 ggorjan
* man/gdata-package.Rd: keyword
2007-08-21 15:36 ggorjan
* man/gdata-package.Rd: package help page
2007-08-21 15:30 ggorjan
* NEWS, inst/NEWS: move
2007-08-21 15:29 ggorjan
* NEWS: move
2007-08-20 10:18 ggorjan
* inst/doc/mapLevels.tex: clean
2007-08-20 10:17 ggorjan
* inst/doc/mapLevels.Rnw, inst/doc/mapLevels.pdf,
inst/doc/mapLevels.tex: a real vignette
2007-08-20 10:00 ggorjan
* inst/doc/unknown.Rnw, inst/doc/unknown.pdf, inst/doc/unknown.tex:
a real vignette
2007-08-20 08:18 ggorjan
* man/unknown.Rd: additional keyword for searchig
2007-08-17 12:40 ggorjan
* man/unknown.Rd: keyword
2007-07-22 09:27 arnima
* R/Args.R, R/keep.R: Reverted back to as.character(substitute(x)),
so user can run keep(x),
keep("x"), Args(x), and Args("x").
2007-07-21 18:57 arnima
* R/keep.R: Changed as.character(substitute()) to
deparse(substitute()), following
help(substitute) recommendation.
2007-07-21 18:49 arnima
* R/Args.R: Changed as.character(substitute()) to
deparse(substitute()), following
help(substitute) recommendation.
2007-07-10 17:51 warnes
* R/read.xls.R, man/read.xls.Rd: Update read.xls() code and docs
with enhacements by Gabor Grothendieck
2007-06-06 10:24 ggorjan
* inst/doc/unknown.pdf, inst/doc/unknown.tex: last edits from
newsletter
2007-06-06 10:19 ggorjan
* R/drop.levels.R, man/drop.levels.Rd: drop levels as suggested by
Brian Ripley
2007-06-06 10:17 ggorjan
* inst/unitTests/Makefile, tests/doRUnit.R: better integration of
unit tests
2007-06-06 10:15 ggorjan
* R/mapLevels.R, R/unknown.R: making codetools happy
2007-01-28 10:42 arnima
* R/keep.R: Throw warnings rather than errors
2007-01-27 11:36 arnima
* R/keep.R: Meaningful error message is given when requested object
does not exist
2007-01-27 11:35 arnima
* R/is.what.R: is.* tests that return NA are not reported
is.what recursion is avoided
2006-11-30 21:38 ggorjan
* R/unknown.R: minor commet to the code
2006-11-30 21:36 ggorjan
* inst/doc/mapLevels.pdf, inst/doc/mapLevels.tex: description of
mapLevels methods
2006-11-30 21:32 ggorjan
* inst/doc/unknown.pdf, inst/doc/unknown.tex: description of
unknown methods
2006-11-16 13:05 ggorjan
* R/c.factor.R, man/c.factor.Rd: seems that c.factor was not a good
idea and there were better examples posted on r-devel list
2006-11-14 22:25 ggorjan
* man/combine.Rd, man/frameApply.Rd, trunk/gmodels/R/ci.R,
trunk/gmodels/R/fast.prcomp.R, trunk/gmodels/man/ci.Rd,
trunk/gplots/R/bandplot.R, trunk/gplots/R/boxplot.n.R,
trunk/gplots/R/lowess.R, trunk/gplots/R/plot.lm.R,
trunk/gplots/R/plotCI.R, trunk/gplots/R/plotmeans.R,
trunk/gplots/R/residplot.R, trunk/gplots/R/wapply.R,
trunk/gplots/man/boxplot.n.Rd, trunk/gplots/man/plotCI.Rd,
trunk/gplots/man/plotmeans.Rd, trunk/gtools/R/combinations.R,
trunk/gtools/R/running.R, trunk/gtools/man/ELISA.Rd,
trunk/gtools/man/combinations.Rd: Removed executable property
2006-11-10 23:51 ggorjan
* NAMESPACE, NEWS: just formatting
2006-11-02 15:08 ggorjan
* man/mapLevels.Rd, man/unknown.Rd: typos
2006-10-30 22:54 ggorjan
* man/write.fwf.Rd: some more examples for use of read.fwf after
write.fwf
2006-10-30 22:34 ggorjan
* inst/unitTests: ignore for report files
2006-10-30 19:18 ggorjan
* tests/tests.write.fwf.Rout.save: Id tag from source
2006-10-30 19:07 ggorjan
* NAMESPACE: removing unused import
2006-10-30 19:04 ggorjan
* R/write.fwf.R, inst/unitTests/runit.write.fwf.R,
man/write.fwf.Rd, tests/tests.write.fwf.R: Id tag
2006-10-30 19:02 ggorjan
* NAMESPACE, NEWS, R/write.fwf.R, inst/unitTests/runit.write.fwf.R,
man/write.fwf.Rd, tests/tests.write.fwf.R,
tests/tests.write.fwf.Rout.save: write.fwf
2006-10-30 17:27 ggorjan
* inst/unitTests/runit.reorder.factor.R: Id tag
2006-10-30 17:26 ggorjan
* inst/unitTests/runit.reorder.factor.R: added unit tests for
reorder.factor
2006-10-30 17:10 ggorjan
* R/c.factor.R, R/mapLevels.R, R/unknown.R,
inst/unitTests/runit.drop.levels.R,
inst/unitTests/runit.mapLevels.R, inst/unitTests/runit.trim.R,
inst/unitTests/runit.unknown.R, man/c.factor.Rd, man/unknown.Rd,
tests/doRUnit.R: mapply keeps names in R 2.4; POSIX unit tests
solved; $ should work now
2006-10-29 16:08 ggorjan
* NEWS, R/unknown.R, inst/unitTests/runit.unknown.R,
man/unknown.Rd: fixed problem in tests; added unknown methods and
tests for matrices
2006-10-29 15:47 ggorjan
* R/drop.levels.R, R/mapLevels.R, inst/unitTests/runit.mapLevels.R,
man/mapLevels.Rd, tests/doRUnit.R: sort is generic now; mapply
keeps names in R 2.4.0; some codetools suggestions fixed
2006-10-29 15:34 ggorjan
* DESCRIPTION, NAMESPACE: sort is generic from R 2.4.0
2006-10-29 15:28 ggorjan
* DESCRIPTION, NEWS, R/trim.R, man/trim.Rd: trim() gains ...
argument; version bump
2006-10-29 12:55 ggorjan
* NEWS, R/reorder.R, man/reorder.Rd: Fixed collision bug with stats
version of reorder.factor
2006-10-27 21:15 warnes
* R/c.factor.R, man/c.factor.Rd: Add c() method for factor objects,
submitted by Gregor Gorjanc
2006-09-19 21:08 warnes
* NEWS: Update NEWS file for 2.3.0 release
2006-09-19 20:52 warnes
* inst/unitTests/runit.trim.R: Explicitly set the local in
runit.trim.R to one where leading spaces affect sort order so
that the unit test works properly.
2006-09-18 20:33 warnes
* inst/doc/Rnews.sty: Update Rnews.sty to the latest version
2006-09-18 20:24 warnes
* R/trim.R, inst/unitTests/Makefile, inst/unitTests/runit.trim.R,
man/trim.Rd, tests/doRUnit.R: Integrate fixes for trim() from
Gregor and myself.
2006-09-18 19:32 warnes
* inst/unitTests/report.html, inst/unitTests/report.txt: Remove
unneeded files.
2006-09-13 19:46 warnes
* R/unknown.R, inst/unitTests, inst/unitTests/Makefile,
inst/unitTests/report.html, inst/unitTests/report.txt,
inst/unitTests/runit.drop.levels.R,
inst/unitTests/runit.mapLevels.R, inst/unitTests/runit.trim.R,
inst/unitTests/runit.unknown.R, man/unknown.Rd, tests,
tests/doRUnit.R: Add unknown() and unit test files
2006-09-13 18:15 warnes
* NAMESPACE, R/drop.levels.R, R/mapLevels.R, R/trim.R: More fixes
from Gregor Gorjanc
2006-09-13 14:55 warnes
* DESCRIPTION, NAMESPACE, R/combineLevels.R, R/mapFactor.R,
R/mapLevels.R, man/combineLevels.Rd, man/mapFactor.Rd,
man/mapLevels.Rd: Add mapLevels functions from Gregor Gorjanc,
along with associated unit tests.
2006-08-03 22:26 warnes
* DESCRIPTION, NAMESPACE, R/combineLevels.R, R/mapFactor.R,
man/combineLevels.Rd, man/mapFactor.Rd: Add Gregor Gorjanc's
mapFactor() and combineLevels() functions.
2006-08-02 22:21 warnes
* trunk/BalloonPlotPaper/BalloonPlot.pdf,
trunk/BalloonPlotPaper/BalloonPlot.tex,
trunk/MSOfficeUtil/DESCRIPTION,
trunk/PathwayModeling/thesispaper/slides.tex,
trunk/RMCMC/DESCRIPTION, trunk/RMCMC/man/make.density.Rd,
trunk/Rlsf/DESCRIPTION, trunk/Rlsf/man/lsf.numcpu.Rd,
trunk/Rlsf/man/lsf.parRapply.Rd, trunk/Rlsf/man/scat.Rd,
trunk/bwRF/DESCRIPTION, trunk/bwRF/man/RF.Rd,
trunk/exp.ssize/inst/doc/ssize.pdf,
trunk/exp.ssize/inst/doc/ssize.tex, trunk/fork/DESCRIPTION,
trunk/fork/man/exit.Rd, trunk/fork/man/fork.Rd,
trunk/fork/man/getpid.Rd, trunk/fork/man/kill.Rd,
trunk/fork/man/signame.Rd, trunk/fork/man/wait.Rd,
inst/doc/gregmisc.tex, man/ConvertMedUnits.Rd,
man/aggregate.table.Rd, man/combine.Rd, man/interleave.Rd,
man/matchcols.Rd, man/nobs.Rd, man/read.xls.Rd,
man/rename.vars.Rd, man/reorder.Rd, man/trim.Rd, man/unmatrix.Rd,
man/upperTriangle.Rd, trunk/gmodels/man/fast.prcomp.Rd,
trunk/gmodels/man/fit.contrast.Rd, trunk/gmodels/man/glh.test.Rd,
trunk/gmodels/man/make.contrasts.Rd,
trunk/gplots/inst/doc/BalloonPlot.pdf,
trunk/gplots/man/balloonplot.Rd, trunk/gplots/man/bandplot.Rd,
trunk/gplots/man/boxplot.n.Rd, trunk/gplots/man/colorpanel.Rd,
trunk/gplots/man/hist2d.Rd, trunk/gplots/man/ooplot.Rd,
trunk/gplots/man/overplot.Rd, trunk/gplots/man/plot.lm2.Rd,
trunk/gplots/man/plotCI.Rd, trunk/gplots/man/plotmeans.Rd,
trunk/gplots/man/residplot.Rd, trunk/gplots/man/sinkplot.Rd,
trunk/gplots/man/smartlegend.Rd, trunk/gplots/man/space.Rd,
trunk/gplots/man/textplot.Rd, trunk/gplots/man/wapply.Rd,
trunk/gregmisc/DESCRIPTION,
trunk/gregmisc/gregmisc/DESCRIPTION.standalone,
trunk/gregmisc/inst/doc/gregmisc.tex,
trunk/gtools/man/addLast.Rd, trunk/gtools/man/assert.Rd,
trunk/gtools/man/capture.Rd, trunk/gtools/man/combinations.Rd,
trunk/gtools/man/defmacro.Rd, trunk/gtools/man/dirichlet.Rd,
trunk/gtools/man/foldchange.Rd, trunk/gtools/man/invalid.Rd,
trunk/gtools/man/logit.Rd, trunk/gtools/man/mixedsort.Rd,
trunk/gtools/man/oddeven.Rd, trunk/gtools/man/permute.Rd,
trunk/gtools/man/quantcut.Rd, trunk/gtools/man/running.Rd,
trunk/gtools/man/scat.Rd, trunk/gtools/man/setTCPNoDelay.Rd,
trunk/nws/DESCRIPTION, trunk/qvalue/DESCRIPTION,
trunk/qvalue/man/print.qvalue.Rd, trunk/ssize/DESCRIPTION,
trunk/ssize/man/pow.Rd: Update my email address
2006-08-02 21:03 warnes
* data/MedUnits.rda: Remove MedUnits.rda to convert to binary
format
2006-08-02 21:03 warnes
* data/MedUnits.rda: Remove MedUnits.rda to convert to binary
format
2006-08-02 19:06 warnes
* DESCRIPTION: Update version number
2006-08-02 19:04 warnes
* NAMESPACE, R/drop.levels.R, R/trim.R, man/drop.levels.Rd,
man/trim.Rd: Integrate changes suggested by Gregor Gorjanc
2006-03-14 18:00 nj7w
* NAMESPACE, R/trim.R, man/resample.Rd: Fixed R CMD check errors
and added trim.default to NAMESPACE
2006-03-13 19:50 nj7w
* R/trim.R: Added trim.character and trim.factor as per Gregor's
suggestions
2006-01-03 20:20 warnes
* NAMESPACE, R/resample.R, man/resample.Rd: Add resample()
function, which generates a random sample or
permutation from the elements of the supplied vector, even if the
vector has length 1. This avoide the problems caused by
base::sample()'s special case for vectors of length 1, where it
attempts to sample from 1:x.
2005-12-13 15:56 nj7w
* ChangeLog, NEWS: Updated news and removed changelog
2005-12-12 22:02 nj7w
* DESCRIPTION, man/interleave.Rd: Updated version number for CRAN
release
2005-12-08 20:18 warnes
* R/interleave.R: Andrew Burgess reported that interleave()
converts 1-column matrixes
to vectors and provided a patch. A slight modification of his
patch
has been applied. There is now a 'drop' argument, which controls
whether 'unnecessary' dimensions are dropped. The default is
FALSE.
2005-12-04 03:02 warnes
* man/interleave.Rd: Andrew Burgess reported that interleave()
converts 1-column matrixes
to vectors and provided a patch. A slight modification of his
patch
has been applied. There is now a 'drop' argument, which controls
whether 'unnecessary' dimensions are dropped. The default is
FALSE.
2005-12-01 16:41 nj7w
* man/combine.Rd, man/reorder.Rd: Updated Greg's email address
2005-12-01 16:39 nj7w
* man/drop.levels.Rd, man/frameApply.Rd, man/ll.Rd,
man/read.xls.Rd: Updated Jim's email address
2005-11-21 18:20 arnima
* R/ll.R: Suppressed warning message in attach() call.
2005-10-27 18:41 warnes
* DESCRIPTION: Bump version number again to show that I fixed a
bug.
2005-10-27 18:19 warnes
* DESCRIPTION, R/upperTriangle.R: Update version number
2005-10-27 18:19 warnes
* man/frameApply.Rd, man/reorder.Rd: Remove explicit loading of
gtools in examples, so that failure to
import functions from gtools gets properly caught by running the
examples.
2005-10-27 18:18 warnes
* man/upperTriangle.Rd: Add missing close-bracket
2005-10-27 18:17 warnes
* NAMESPACE: Add upperTriangle and friends
2005-10-27 12:59 warnes
* R/upperTriangle.R, man/upperTriangle.Rd: Add functions for
extracting, modifying upper and lower trianglular
components of matrices.
2005-10-19 16:36 arnima
* R/is.what.R: Replaced the "not.using" vector with a more robust
try(get(test)) to find out whether a particular is.* function
returns a logical of length one.
2005-09-12 15:44 nj7w
* man/aggregate.table.Rd, man/interleave.Rd, man/matchcols.Rd,
man/nobs.Rd, man/read.xls.Rd, man/rename.vars.Rd, man/trim.Rd,
man/unmatrix.Rd, trunk/gmodels/man/fast.prcomp.Rd,
trunk/gmodels/man/glh.test.Rd, trunk/gplots/man/hist2d.Rd,
trunk/gplots/man/ooplot.Rd, trunk/gplots/man/residplot.Rd,
trunk/gplots/man/sinkplot.Rd, trunk/gplots/man/smartlegend.Rd,
trunk/gplots/man/space.Rd, trunk/gtools/man/assert.Rd,
trunk/gtools/man/dirichlet.Rd, trunk/gtools/man/permute.Rd,
trunk/gtools/man/scat.Rd: Updated Greg's email
2005-09-06 15:43 nj7w
* man/reorder.Rd: Added library(gtools) in the example
2005-09-06 15:41 nj7w
* NAMESPACE: Removed gtools dependency from NAMESPACE, as it was
being used only in an example, and was giving warning
2005-09-06 15:39 nj7w
* DESCRIPTION: Added Suggests field
2005-09-02 23:23 nj7w
* man/frameApply.Rd: Updated the example in frameApply
2005-09-02 23:14 nj7w
* NEWS: Added NEWS
2005-09-02 23:00 nj7w
* ChangeLog: ChangeLog
2005-08-31 16:28 nj7w
* DESCRIPTION, trunk/gmodels/DESCRIPTION, trunk/gplots/DESCRIPTION:
Added DESCRIPTION file
2005-08-31 16:27 nj7w
* DESCRIPTION.in, trunk/gmodels/DESCRIPTION.in,
trunk/gplots/DESCRIPTION.in: removed DESCRIPTION.in
2005-07-20 21:06 nj7w
* man/ll.Rd: updated documentation
2005-07-20 21:05 nj7w
* R/Args.R: ## Args() was using a different search path from
args(), e.g.
rep <- function(local) return(NULL)
args()
Args()
## Fixed
2005-07-20 21:05 nj7w
* R/is.what.R: ## is.what() was giving needless warnings for
functions, e.g.
is.what(plot)
## Fixed
2005-07-20 21:04 nj7w
* R/ll.R: ## ll() was crashing if argument was a list of length
zero, e.g.
x <- list()
ll(x)
## Fixed, and added sort.elements (see new help page)
2005-06-09 14:20 nj7w
* R/Args.R, R/aggregate.table.R, R/combine.R, R/elem.R, R/env.R,
R/frameApply.R, R/interleave.R, R/is.what.R, R/keep.R, R/ll.R,
R/matchcols.R, R/nobs.R, R/read.xls.R, R/rename.vars.R,
R/reorder.R, R/trim.R, R/unmatrix.R, inst/perl/IO/AtomicFile.pm,
inst/perl/IO/InnerFile.pm, inst/perl/IO/Lines.pm,
inst/perl/IO/Scalar.pm, inst/perl/IO/Scalar.pm.html,
inst/perl/IO/ScalarArray.pm, inst/perl/IO/Stringy.pm,
inst/perl/IO/Wrap.pm, inst/perl/IO/WrapTie.pm,
man/aggregate.table.Rd, man/combine.Rd, man/drop.levels.Rd,
man/interleave.Rd, man/nobs.Rd, man/rename.vars.Rd,
man/reorder.Rd, trunk/gmodels/R/ci.R,
trunk/gmodels/R/coefFrame.R, trunk/gmodels/R/estimable.R,
trunk/gmodels/R/fast.prcomp.R, trunk/gmodels/R/fit.contrast.R,
trunk/gmodels/R/glh.test.R, trunk/gmodels/R/make.contrasts.R,
trunk/gmodels/man/CrossTable.Rd, trunk/gmodels/man/ci.Rd,
trunk/gmodels/man/coefFrame.Rd, trunk/gmodels/man/estimable.Rd,
trunk/gmodels/man/fast.prcomp.Rd,
trunk/gmodels/man/fit.contrast.Rd, trunk/gmodels/man/glh.test.Rd,
trunk/gmodels/man/make.contrasts.Rd,
trunk/gplots/R/balloonplot.R, trunk/gplots/R/bandplot.R,
trunk/gplots/R/boxplot.n.R, trunk/gplots/R/colorpanel.R,
trunk/gplots/R/heatmap.2.R, trunk/gplots/R/hist2d.R,
trunk/gplots/R/lowess.R, trunk/gplots/R/ooplot.R,
trunk/gplots/R/overplot.R, trunk/gplots/R/plotCI.R,
trunk/gplots/R/plotmeans.R, trunk/gplots/R/qqnorm.aov.R,
trunk/gplots/R/residplot.R, trunk/gplots/R/rich.color.R,
trunk/gplots/R/sinkplot.R, trunk/gplots/R/smartlegend.R,
trunk/gplots/R/space.R, trunk/gplots/R/textplot.R,
trunk/gplots/R/wapply.R, trunk/gplots/man/1,
trunk/gplots/man/bandplot.Rd, trunk/gplots/man/barplot2.Rd,
trunk/gplots/man/boxplot.n.Rd, trunk/gplots/man/hist2d.Rd,
trunk/gplots/man/lowess.Rd, trunk/gplots/man/plotCI.Rd,
trunk/gplots/man/plotmeans.Rd, trunk/gplots/man/residplot.Rd,
trunk/gplots/man/space.Rd, trunk/gplots/man/wapply.Rd,
trunk/gtools/R/RSCompat.S, trunk/gtools/R/combinations.R,
trunk/gtools/R/dirichlet.R, trunk/gtools/R/foldchange.R,
trunk/gtools/R/invalid.R, trunk/gtools/R/logit.R,
trunk/gtools/R/mixedsort.R, trunk/gtools/R/oddeven.R,
trunk/gtools/R/permute.R, trunk/gtools/R/quantcut.R,
trunk/gtools/R/running.R, trunk/gtools/R/scat.R,
trunk/gtools/man/ELISA.Rd, trunk/gtools/man/combinations.Rd,
trunk/gtools/man/dirichlet.Rd, trunk/gtools/man/foldchange.Rd,
trunk/gtools/man/invalid.Rd, trunk/gtools/man/logit.Rd,
trunk/gtools/man/mixedsort.Rd, trunk/gtools/man/oddeven.Rd,
trunk/gtools/man/permute.Rd, trunk/gtools/man/quantcut.Rd,
trunk/gtools/man/running.Rd, trunk/gtools/man/scat.Rd: Updating
the version number, and various help files to synchronize
splitting of gregmisc bundle in 4 individual components.
2005-06-07 19:51 nj7w
* R/drop.levels.R: Reverting to the previous version of
drop.levels.R by replacing
sapply(...) with as.data.frame(lapply(...)) because sapply has
the undesirable effect of converting the object to a matrix,
which in turn coerces the factors to numeric.
2005-05-13 18:59 nj7w
* R/read.xls.R, trunk/gmodels/man/CrossTable.Rd,
trunk/gplots/man/heatmap.2.Rd: 1) Using dQuote.ascii function in
read.xls as the new version of dQuote doesn't work proprly with
UTF-8 locale.
2) Modified CrossTable.Rd usage in gmodels
3) Modified heatmap.2 usage in gplots.
2005-04-02 04:19 warnes
* NAMESPACE, R/drop.levels.R, man/drop.levels.Rd,
trunk/gtools/NAMESPACE, trunk/gtools/R/drop.levels.R,
trunk/gtools/man/drop.levels.Rd: Move drop.levels() from gtools
to gdata.
2005-04-02 04:14 warnes
* NAMESPACE, R/frameApply.R, man/frameApply.Rd,
trunk/gtools/NAMESPACE, trunk/gtools/R/frameApply.R,
trunk/gtools/man/frameApply.Rd: Move frameApply() to gdata
package.
2005-03-31 18:11 warnes
* man/elem.Rd: Comment out example to avoid R CMD check warnings
2005-03-22 06:16 warnes
* NAMESPACE, R/ConvertMedUnits.R, data/MedUnits.Rda,
data/MedUnits.rda, man/ConvertMedUnits.Rd, man/MedUnits.Rd,
trunk/gregmisc/DESCRIPTION, trunk/gregmisc/NEWS: Fixes to pass `R
CMD check'.
2005-03-22 02:51 warnes
* R/Args.R, R/env.R, R/ll.R, man/Args.Rd: Integrated fixes from
Arni.
2005-03-22 02:50 warnes
* man/read.xls.Rd: Improve documentation of 'perl' argument and
give examples.
2005-03-09 23:39 warnes
* R/ConvertMedUnits.R, man/ConvertMedUnits.Rd, man/MedUnits.Rd: -
Add ConvertMedUnits() plus documentation
- Add documentation for MedUnits data set.
2005-03-09 23:37 warnes
* data/MedUnits.Rda: Update MedUnits data file.
2005-03-09 22:00 warnes
* data/MedUnits.tab: Don't need both .Rda and .tab forms of the
data.
2005-03-09 21:55 warnes
* data, data/MedUnits.Rda, data/MedUnits.tab: Add MedUnits data
set, which provides conversions between American
'Conventional' and Standard Intertional (SI) medical units.
2005-03-01 17:59 warnes
* man/elem.Rd, man/ll.Rd: - Remove 'elem' call from ll example.
- Add note to 'elem' man page that it is depreciated and 'll'
should
be used instead.
2005-02-26 01:15 nj7w
* NAMESPACE, man/elem.Rd, man/env.Rd, man/ll.Rd, man/read.xls.Rd,
trunk/gplots/R/heatmap.2.R, trunk/gplots/man/heatmap.2.Rd,
trunk/gplots/man/rich.color.Rd, trunk/gplots/man/sinkplot.Rd,
trunk/gplots/man/textplot.Rd: *** empty log message ***
2005-02-25 23:32 warnes
* NAMESPACE: Remove ll methods since the base function now handles
lists and data frames.
2005-02-25 23:22 warnes
* R/elem.R, R/env.R, R/ll.R, man/Args.Rd, man/env.Rd, man/ll.Rd,
trunk/gplots/man/rich.color.Rd: Integrate changes submitted by
Arni Magnusson
2005-01-31 22:22 warnes
* R/read.xls.R, man/read.xls.Rd: Add ability to specify the perl
executable and path.
2005-01-28 18:58 warnes
* DESCRIPTION.in, NAMESPACE: Add dependency on stats.
2005-01-12 20:50 warnes
* DESCRIPTION.in, trunk/gmodels/DESCRIPTION.in,
trunk/gplots/DESCRIPTION.in, trunk/gtools/DESCRIPTION.in: Add
dependency on R 1.9.0+ to prevent poeple from installing on old
versions of R which don't support namespaces.
2004-12-27 22:09 warnes
* man/unmatrix.Rd: Update usage to match code.
2004-12-27 22:05 warnes
* R/unmatrix.R: Replace 'F' with 'FALSE'.
2004-10-12 14:57 warneg
* R/unmatrix.R, man/unmatrix.Rd: Add unmatrix() function
2004-09-27 21:01 warneg
* DESCRIPTION, DESCRIPTION.in, NAMESPACE, man/.Rhistory,
trunk/gmodels/DESCRIPTION, trunk/gmodels/DESCRIPTION.in,
trunk/gplots/DESCRIPTION, trunk/gplots/DESCRIPTION.in,
trunk/gplots/man/sinkplot.Rd, trunk/gplots/man/textplot.Rd,
trunk/gregmisc/.Rhistory, trunk/gregmisc/DESCRIPTION,
trunk/gtools/DESCRIPTION, trunk/gtools/DESCRIPTION.in,
trunk/gtools/man/running.Rd: Updated to pass R CMD check.
2004-09-03 23:08 warneg
* inst/xls, inst/xls/iris.xls: added to cvs.
2004-09-03 22:58 warneg
* inst/perl/xls2csv.pl: Checkin xls2csv.pl. Should have been in
long ago, must have been an oversight
2004-09-03 22:46 warneg
* R/read.xls.R: Need to look for files using the new package name.
2004-09-03 22:43 warneg
* man/read.xls.Rd: Need to use the new package name when looking
for iris.xls.
2004-09-03 22:42 warneg
* man/ll.Rd: Add ll.list to the to the list of functions described
2004-09-03 22:42 warneg
* NAMESPACE: Add ll and friends to the namespace
2004-09-03 17:27 warneg
* DESCRIPTION, DESCRIPTION.in, NAMESPACE, R/Args.R,
R/aggregate.table.R, R/combine.R, R/elem.R, R/env.R,
R/interleave.R, R/is.what.R, R/keep.R, R/ll.R, R/matchcols.R,
R/nobs.R, R/read.xls.R, R/rename.vars.R, R/reorder.R, R/trim.R,
man/reorder.Rd, trunk/gmodels/DESCRIPTION,
trunk/gmodels/NAMESPACE, trunk/gmodels/R/CrossTable.R,
trunk/gmodels/R/ci.R, trunk/gmodels/R/estimable.R,
trunk/gmodels/R/fast.prcomp.R, trunk/gmodels/R/fit.contrast.R,
trunk/gmodels/R/glh.test.R, trunk/gmodels/R/make.contrasts.R,
trunk/gmodels/man/estimable.Rd,
trunk/gmodels/man/fit.contrast.Rd, trunk/gmodels/man/glh.test.Rd,
trunk/gmodels/man/make.contrasts.Rd, trunk/gplots/DESCRIPTION,
trunk/gplots/NAMESPACE, trunk/gplots/R/balloonplot.R,
trunk/gplots/R/bandplot.R, trunk/gplots/R/barplot2.R,
trunk/gplots/R/boxplot.n.R, trunk/gplots/R/colorpanel.R,
trunk/gplots/R/heatmap.2.R, trunk/gplots/R/hist2d.R,
trunk/gplots/R/lowess.R, trunk/gplots/R/ooplot.R,
trunk/gplots/R/overplot.R, trunk/gplots/R/plotCI.R,
trunk/gplots/R/plotmeans.R, trunk/gplots/R/qqnorm.aov.R,
trunk/gplots/R/residplot.R, trunk/gplots/R/rich.color.R,
trunk/gplots/R/sinkplot.R, trunk/gplots/R/smartlegend.R,
trunk/gplots/R/space.R, trunk/gplots/R/textplot.R,
trunk/gplots/R/wapply.R, trunk/gtools/DESCRIPTION,
trunk/gtools/NAMESPACE, trunk/gtools/R/dirichlet.R,
trunk/gtools/R/foldchange.R, trunk/gtools/R/invalid.R,
trunk/gtools/R/mixedsort.R, trunk/gtools/R/oddeven.R,
trunk/gtools/R/permute.R, trunk/gtools/R/quantcut.R,
trunk/gtools/R/running.R, trunk/gtools/man/running.Rd: initial
bundle checkin
2004-09-02 17:14 warneg
* DESCRIPTION, DESCRIPTION.in, NAMESPACE, man/.Rhistory,
trunk/gmodels/DESCRIPTION, trunk/gmodels/DESCRIPTION.in,
trunk/gmodels/NAMESPACE, trunk/gplots/DESCRIPTION,
trunk/gplots/DESCRIPTION.in, trunk/gplots/NAMESPACE,
trunk/gplots/man/1, trunk/gplots/man/residplot.Rd,
trunk/gregmisc/.Rhistory, trunk/gtools/DESCRIPTION,
trunk/gtools/DESCRIPTION.in, trunk/gtools/NAMESPACE: Initial
revision
2004-08-27 21:57 warnes
* R/reorder.R, man/reorder.Rd, trunk/gtools/R/mixedsort.R,
trunk/gtools/man/mixedsort.Rd: Fixed bug in mixedsort, and
modified reorder.factor to use mixedsort.
2004-07-29 15:27 warnes
* inst/perl, inst/perl/IO, inst/perl/IO/AtomicFile.pm,
inst/perl/IO/InnerFile.pm, inst/perl/IO/Lines.pm,
inst/perl/IO/Scalar.pm, inst/perl/IO/Scalar.pm.html,
inst/perl/IO/ScalarArray.pm, inst/perl/IO/Stringy.pm,
inst/perl/IO/Wrap.pm, inst/perl/IO/WrapTie.pm, inst/perl/OLE,
inst/perl/OLE/Storage_Lite.pm, inst/perl/Spreadsheet,
inst/perl/Spreadsheet/ParseExcel,
inst/perl/Spreadsheet/ParseExcel.pm,
inst/perl/Spreadsheet/ParseExcel/Dump.pm,
inst/perl/Spreadsheet/ParseExcel/FmtDefault.pm,
inst/perl/Spreadsheet/ParseExcel/FmtJapan.pm,
inst/perl/Spreadsheet/ParseExcel/FmtJapan2.pm,
inst/perl/Spreadsheet/ParseExcel/FmtUnicode.pm,
inst/perl/Spreadsheet/ParseExcel/SaveParser.pm,
inst/perl/Spreadsheet/ParseExcel/Utility.pm: Add perl modules to
CVS.
2004-07-27 14:29 warnes
* man/read.xls.Rd: Fix typos/spelling.
2004-07-27 14:25 warnes
* man/read.xls.Rd: Add note that Perl is required for read.xls to
work properly.
2004-07-16 19:28 warnes
* R/read.xls.R: Remove the temporary csv file if reading it in
fails.
2004-06-22 17:09 warnes
* R/ll.R, man/ll.Rd: Add S3 methods for data frames and lists.
2004-06-08 03:54 warnes
* inst/bin, inst/bin/xls2csv, inst/bin/xls2csv.bat: Moved from
gregmisc/src/.
2004-06-08 03:44 warnes
* inst/tools: Remove the files in src, instead provide
"pre-installed" perl packages
in inst/perl.
2004-06-05 05:42 warnes
* inst/tools/Makefile: Fix typo.
2004-06-05 05:34 warnes
* inst/tools/Makefile: Fix Unix makefile so that it works when
invoked directly.
2004-06-05 05:30 warnes
* inst/tools/Makefile: Fixes for Windows
2004-06-05 05:22 warnes
* man/read.xls.Rd: Minor enhancment to read.xls example.
2004-06-05 04:05 warnes
* inst/tools/Makefile, inst/xls, trunk/gregmisc/DESCRIPTION,
trunk/gregmisc/NEWS: - Merge Makefile.win into Makefile.
Makefile.win now just redirects
to Makefile.
- Update xls2csv.bat and xls2csv shell script to correctly obtain
thier installion path and infer the location of the perl code and
libraries.
- The xls2csv.pl script now assumes that the libraries it needs
are
installed into the same directory where it is.
2004-06-04 20:42 warnes
* inst/tools/Makefile: More changes, indended to improve
installation reliabilty and to make
Makefile and Makefile.win as similar as possible.
2004-05-27 22:39 warnes
* inst/tools/Makefile: Clean should remove scripts from source
directory.
2004-05-27 22:38 warnes
* inst/perl: Moved to xls2csv.pl.in.
2004-05-27 22:20 warnes
* inst/perl/xls2csv.pl, inst/tools/Makefile: More fixes.
2004-05-27 22:20 warnes
* man/elem.Rd: Fix missing brace.
2004-05-27 21:43 warnes
* man/elem.Rd: Add explicit package name to see also links.
2004-05-27 21:24 warnes
* inst/perl/xls2csv.pl, inst/tools/Makefile: More xls2csv perl
module support changes.
2004-05-27 20:37 warnes
* inst/tools/Makefile: More changes to fix local installation of
perl modules.
2004-05-26 13:40 warnes
* man/read.xls.Rd, trunk/gtools/man/combinations.Rd: Escape
underscores in email addresses so Latex is happy.
2004-05-25 18:45 warnes
* inst/perl/xls2csv.pl, inst/tools/Makefile: More changes to
xls2csv code.
2004-05-25 17:35 warnes
* R/Args.R, man/Args.Rd: Add Args() function contributed by Arni
Magnusson <arnima@u.washington.edu>.
2004-05-25 17:14 warnes
* R/read.xls.R: - Change to call perl directly rather than
depending on the installed
shell script. This should make the code more portable to
MS-Windows
systes.
- Add additional commants..
2004-05-25 14:53 warnes
* inst/tools/Makefile: Makefile now modifies xls2csv.bat xls2csv.pl
and xls2csv to contain an
explicit path to the perl script/libraries.
2004-05-25 11:41 warnes
* inst/tools/Makefile: R CMD build calls the clean target to purge
build files from the
source tree when packaging. To get use this behavior correctly,
I've
renamed the clean target to cleanup and distclean target to
clean.
2004-05-25 11:35 warnes
* R/read.xls.R, man/read.xls.Rd: Add read.xls(), a function to read
Microsoft Excel files by
translating them to csv files via the xls2csv.pl script.
2004-05-25 02:46 warnes
* inst/tools/Makefile: More fixes. Seems to work now.
2004-05-24 23:46 warnes
* inst/perl, inst/perl/xls2csv.pl, inst/tools, inst/tools/Makefile,
inst/xls, inst/xls/iris.xls: Add files to enable inclusion and
installation of xls2csv.pl as part
of the package.
2004-04-01 20:23 warnes
* R/rename.vars.R, man/rename.vars.Rd: Add function remove.vars().
2004-03-26 22:31 warnes
* man/reorder.Rd: Contents of package 'mva' moveed to 'stats'.
2004-03-26 22:02 warnes
* R/is.what.R: - Fix is.what() for use under R 1.9.0
- is.what() now uses is.* functions found in any attached frame
2004-01-21 12:06 warnes
* R/reorder.R, man/reorder.Rd: - Add ... argument to match generic
provided in mva.
2004-01-19 22:45 warnes
* R/elem.R, R/env.R, R/ll.R, man/keep.Rd, man/ll.Rd: - Integrated
(partial) patch submitted by Arni Magnusson to clarify help text.
- Modifed code to use match.arg().
2003-12-15 21:07 warnes
* R/env.R: - Applied patch from Arni that fixed a bug that caused
env() to crash
if any environment was completely empty
2003-12-03 02:46 warnes
* man/elem.Rd, man/ll.Rd, trunk/gplots/man/lowess.Rd,
trunk/gplots/man/textplot.Rd, trunk/gplots/man/wapply.Rd,
trunk/gtools/man/foldchange.Rd: - match function argument
defaults with 'usage'
2003-12-02 17:00 warnes
* man/ll.Rd: Add one argument, to match code.
2003-12-01 15:56 warnes
* R/elem.R, R/env.R, R/is.what.R, R/keep.R, R/ll.R: - Apply changes
submitted by Arni Magnusson
2003-11-19 14:54 warnes
* man/env.Rd, man/is.what.Rd, man/keep.Rd, man/ll.Rd: Changes to
pass R CMD check.
2003-11-18 18:45 warnes
* R/elem.R, R/env.R, R/is.what.R, R/keep.R, R/ll.R,
trunk/gplots/R/overplot.R: - Convert from MS-Dos to Unix line
endings.
- Reformat to 80 columns.
2003-11-17 22:09 warnes
* man/elem.Rd: Replace 'T' with 'TRUE' to remove R CMD check error.
2003-11-17 22:09 warnes
* man/aggregate.table.Rd: Fix syntax error.
2003-11-10 22:11 warnes
* R/elem.R, R/env.R, R/is.what.R, R/keep.R, R/ll.R, man/elem.Rd,
man/env.Rd, man/is.what.Rd, man/keep.Rd, man/ll.Rd,
trunk/gplots/R/heatmap.2.R, trunk/gplots/R/overplot.R,
trunk/gplots/R/plotmeans.R, trunk/gplots/R/space.R,
trunk/gplots/R/wapply.R, trunk/gregmisc/DESCRIPTION,
trunk/gtools/R/capture.R, trunk/gtools/man/capture.Rd: - Add
files contributed by Arni Magnusson
<arnima@u.washington.edu>. As well as some of my own.
2003-06-07 17:58 warnes
* man/aggregate.table.Rd, man/interleave.Rd: - Fixed error in
examples. Had sqrt(var(x)/(n-1)) for the standard
error of the mean instead of sqrt(var(x)/n).
2003-05-23 18:32 warnes
* R/matchcols.R, man/matchcols.Rd: - Fixed typos
2003-05-23 18:14 warnes
* R/matchcols.R, man/matchcols.Rd, trunk/gtools/R/logit.R,
trunk/gtools/man/logit.Rd: - library() backported from 1.7-devel.
This version of the function
adds the "pos=" argument to specify where in the search path the
library should be placed.
- updated .First.lib to use library(...pos=3) for MASS to avoid
the
'genotype' data set in MASS from masking the genotype funciton in
genetics when it loads gregmisc
- Added logit() inv.logit() matchcols() function and
corresponding docs
2003-05-20 16:03 warnes
* R/interleave.R: - Omit NULL variables.
2003-05-20 13:16 warnes
* R/trim.R, man/trim.Rd, trunk/gregmisc/DESCRIPTION: - Added
function trim() and assocated docs.
2003-04-22 15:42 warnes
* R/reorder.R, man/reorder.Rd: - The mva package (which is part of
recommended) now provides a
generic 'reorder' function. Consequently, the 'reorder' function
here has been renamed to 'reorder.factor'.
- Removed check of whether the argument is a factor object.
2003-03-03 17:48 warnes
* man/reorder.Rd: - Updated to match reorder.Rd which was exetended
to handle factor
label names in addition to numeric indices.
2003-03-03 17:24 warnes
* R/reorder.R: - Added handling of factor level names in addition
to numeric indexes.
2002-09-23 14:02 warnes
* inst, inst/doc, inst/doc/Rnews.dtx, inst/doc/Rnews.sty,
inst/doc/gregmisc.pdf, inst/doc/gregmisc.tex: Added inst/doc
directory and contents to CVS.
2002-09-23 13:59 warnes
* R/aggregate.table.R, R/combine.R, R/interleave.R, R/nobs.R,
man/aggregate.table.Rd, man/combine.Rd, man/interleave.Rd,
man/nobs.Rd, man/rename.vars.Rd, man/reorder.Rd,
trunk/gmodels/R/ci.R, trunk/gmodels/man/estimable.Rd,
trunk/gmodels/man/glh.test.Rd, trunk/gplots/R/boxplot.n.R,
trunk/gplots/R/hist2d.R, trunk/gplots/R/lowess.R,
trunk/gplots/R/residplot.R, trunk/gplots/man/bandplot.Rd,
trunk/gplots/man/hist2d.Rd, trunk/gplots/man/lowess.Rd,
trunk/gplots/man/plotCI.Rd, trunk/gplots/man/space.Rd,
trunk/gtools/man/combinations.Rd, trunk/gtools/man/quantcut.Rd: -
Modified all files to include CVS Id and Log tags.
2002-08-01 18:06 warnes
* R/reorder.R: Added reorder() function to reorder the levels of a
factor.
2002-04-09 00:51 warneg
* R/rename.vars.R, man/aggregate.table.Rd, man/interleave.Rd,
man/reorder.Rd, trunk/gmodels/R/ci.R,
trunk/gmodels/R/estimable.R, trunk/gmodels/R/glh.test.R,
trunk/gmodels/man/glh.test.Rd, trunk/gplots/R/bandplot.R,
trunk/gplots/R/boxplot.n.R, trunk/gplots/R/hist2d.R,
trunk/gplots/R/plot.lm.R, trunk/gplots/R/plotCI.R,
trunk/gplots/R/plotmeans.R, trunk/gplots/R/residplot.R,
trunk/gplots/R/space.R, trunk/gplots/R/wapply.R,
trunk/gplots/man/bandplot.Rd, trunk/gplots/man/boxplot.n.Rd,
trunk/gplots/man/hist2d.Rd, trunk/gplots/man/plotmeans.Rd,
trunk/gplots/man/space.Rd, trunk/gplots/man/wapply.Rd,
trunk/gregmisc/DESCRIPTION, trunk/gtools/R/combinations.R,
trunk/gtools/man/combinations.Rd, trunk/gtools/man/running.Rd:
Checkin for version 0.5.3
2002-04-09 00:46 warneg
* R/interleave.R: - Properly handle case when some or all arguments
are vectors.
2002-03-26 21:22 warneg
* man/reorder.Rd, trunk/gmodels/R/ci.R, trunk/gmodels/R/glh.test.R,
trunk/gmodels/man/ci.Rd, trunk/gmodels/man/glh.test.Rd,
trunk/gplots/R/lowess.R, trunk/gplots/man/lowess.Rd: - Changed
methods to include '...' to match the generic.
- Updated for version 0.5.1
2002-03-26 19:29 warneg
* R/nobs.R: Added ... to methods.
2002-03-26 19:29 warneg
* man/nobs.Rd: Updated to add ... parameter to function calls.
2002-03-26 15:27 warneg
* man/reorder.Rd: Initial checkin.
2002-03-26 14:28 warneg
* R/nobs.R: - Added CVS tags
2002-02-21 21:45 warneg
* R/aggregate.table.R: - Fixed bug where row and column labels
didn't always correspond to the
contents. This only occured when a factor was used for by1 or by2
and
the factors levels weren't in the default sort order.
2002-02-20 22:10 warneg
* R/aggregate.table.R: New function.
2002-02-20 22:09 warneg
* man/aggregate.table.Rd: Initial checkin.
2002-02-20 21:42 warneg
* R/interleave.R, man/interleave.Rd: Initial checkin.
2002-02-20 21:31 warneg
* man/nobs.Rd: Noted that specialized methods exist.
2002-02-20 21:29 warneg
* man/nobs.Rd: Incorrectly had contents of nobs.R here instead of
help text. Corrected.
2002-02-20 20:09 warneg
* man/rename.vars.Rd, trunk/gmodels/man/ci.Rd,
trunk/gmodels/man/estimable.Rd, trunk/gmodels/man/glh.test.Rd,
trunk/gplots/man/lowess.Rd, trunk/gplots/man/plotCI.Rd,
trunk/gplots/man/space.Rd: Minor changes, typo and formatting
fixes.
2002-02-20 20:03 warneg
* R/nobs.R, man/nobs.Rd: - initial checkin.
2001-12-12 01:39 warneg
* man/rename.vars.Rd: Added omitted documentaton for 'info'
parameter. Changed example code
not to use 'Orthodont' data set so that the nlme package is not
required.
2001-12-08 01:54 warneg
* R/rename.vars.R: Changed 'T' to 'TRUE' in parameter list.
2001-12-07 23:33 warneg
* man/rename.vars.Rd: - Fixed see also link. Mis-typed 'data.frame'
as 'dataframe'.
2001-12-07 22:55 warneg
* R/rename.vars.R: Added attribution.
2001-12-07 22:49 warneg
* man/rename.vars.Rd: Added proper attribution to Don MacQueen.
2001-12-07 21:48 warneg
* man/rename.vars.Rd: Initial checkin. Unfortunately, I've lost the
email of the person who
sent this to me. I'll credit him/her when I find out who it was!
2001-12-07 21:40 warneg
* R/rename.vars.R: Initial checkin
2001-12-05 19:51 warneg
* R, R/combine.R: - Renamed 'concat' function to 'combine' to avoid
name conflict with
an existing S-Plus function.
2001-12-05 19:44 warneg
* ., man, man/combine.Rd: - Changed function name 'concat' to
'combine' and renamed concat.Rd to
combine.Rd
