https://github.com/ma-tech/Woolz
Tip revision: 268ab859e01cd3992cf50ed702dd095e570689d0 authored by Bill Hill on 26 June 2017, 11:01:46 UTC
Fixes for JavaWoolz.
Fixes for JavaWoolz.
Tip revision: 268ab85
build.sh
#!/bin/sh
# This script will configure and build Woolz. Uncomment the appropriate
# configure command line for the build you want. The easiest way to use
# this script is probably to copy it to mybuild.sh and the edit that script.
set -x
# In most cases a simple autoreconf should be sufficient
autoreconf
# If you hit problems with missing files or libtool use the following
# autoreconf
# autoreconf -i --force
#export MA=$HOME
#export MA=$HOME/MouseAtlas/Build/
export MA=/opt/MouseAtlas
# Build; with debug and external file formats.
# This requires jpeg, nifti, tiff, bz2, lzma and z libraries.
#./configure --prefix=$MA --enable-debug --enable-extff --with-tiff=$MA --with-nifti=$MA --with-jpeg=$MA
# The default build; optimised, using openmp and external file formats.
# This requires jpeg, nifti, tiff, bz2, lzma and z libraries.
./configure --prefix=$MA --enable-optimise --enable-openmp --enable-extff --with-nifti=$MA --with-jpeg=$MA --with-tiff=$MA --with-pic --enable-static --disable-shared
# A more optimised build suitable for recent compilers and x86_64 processors
# developed after 2013, again this requires jpeg, nifti and tiff libraries.
#./configure --prefix=$MA --enable-optimise --enable-openmp --enable-avx2 --enable-lto --enable-extff --with-nifti=$MA --with-jpeg=$MA --with-tiff=$MA --with-pic --enable-static --disable-shared
# Build the core Woolz code unoptimised with debug support.
# This requires only standard system libraries.
#./configure --prefix=$MA --enable-debug
# Build the core and test Woolz code unoptimised with debug support.
# This requires only standard system libraries.
#./configure --prefix=$MA --enable-debug --enable-test
# Build the core Woolz code optimised
# This requires only standard system libraries.
#./configure --prefix=$MA --enable-optimise --enable-openmp
# Build the core Woolz code optimised with test code.
# This requires only standard system libraries.
#./configure --prefix=$MA --enable-optimise --enable-openmp --enable-test