https://github.com/RadioAstronomySoftwareGroup/pyuvdata
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Tip revision: 8390aaceafd4868ecbd14a4cb6294ca18be7af00 authored by Bryna Hazelton on 12 February 2020, 23:55 UTC
remove extra mwa_beam.py file that got added in the rebase
Tip revision: 8390aac
setup.py
# -*- mode: python; coding: utf-8 -*-
# Copyright (c) 2018 Radio Astronomy Software Group
# Licensed under the 2-clause BSD License

from __future__ import absolute_import, division, print_function

import glob
import os
import io
import sys
import platform
from setuptools import setup, Extension
from setuptools.command.build_ext import build_ext
from distutils.sysconfig import get_config_var
from distutils.version import LooseVersion

# When setting up, the binary extension modules haven't yet been built, so
# without a workaround we can't use the pyuvdata code to get the version.
os.environ['PYUVDATA_IGNORE_EXTMOD_IMPORT_FAIL'] = '1'


def branch_scheme(version):
    """Local version scheme that adds the branch name for absolute reproducibility."""
    if version.exact or version.node is None:
        return version.format_choice("", "+d{time:{time_format}}", time_format="%Y%m%d")
    else:
        if version.branch == "master":
            return version.format_choice("+{node}", "+{node}.dirty")
        else:
            return version.format_choice("+{node}.{branch}", "+{node}.{branch}.dirty")


# this solution works for `pip install .`` but not `python setup.py install`...
class CustomBuildExtCommand(build_ext):
    """build_ext command for use when numpy headers are needed."""

    def run(self):

        # Import numpy here, only when headers are needed
        import numpy

        # Add numpy headers to include_dirs
        self.include_dirs.append(numpy.get_include())

        # Call original build_ext command
        build_ext.run(self)


with io.open('README.md', 'r', encoding='utf-8') as readme_file:
    readme = readme_file.read()


def is_platform_mac():
    return sys.platform == 'darwin'


# For mac, ensure extensions are built for macos 10.9 when compiling on a
# 10.9 system or above, overriding distuitls behaviour which is to target
# the version that python was built for. This may be overridden by setting
# MACOSX_DEPLOYMENT_TARGET before calling setup.py
# implementation based on pandas, see https://github.com/pandas-dev/pandas/issues/23424
if is_platform_mac():
    if 'MACOSX_DEPLOYMENT_TARGET' not in os.environ:
        current_system = LooseVersion(platform.mac_ver()[0])
        python_target = LooseVersion(
            get_config_var('MACOSX_DEPLOYMENT_TARGET'))
        if python_target < '10.9' and current_system >= '10.9':
            os.environ['MACOSX_DEPLOYMENT_TARGET'] = '10.9'

global_c_macros = [
    ('NPY_NO_DEPRECATED_API', 'NPY_1_7_API_VERSION'),
]

casa_reqs = ['python-casacore']
healpix_reqs = ['astropy_healpix']
cst_reqs = ['pyyaml']
test_reqs = (casa_reqs + healpix_reqs + cst_reqs
             + ['pytest', 'pytest-cases', 'pytest-cov', 'coverage', 'flake8',
                'flake8-pytest'])
doc_reqs = ['sphinx', 'pypandoc']

setup_args = {
    'name': 'pyuvdata',
    'author': 'Radio Astronomy Software Group',
    'url': 'https://github.com/RadioAstronomySoftwareGroup/pyuvdata',
    'license': 'BSD',
    'description': 'an interface for astronomical interferometeric datasets in python',
    'long_description': readme,
    'long_description_content_type': 'text/markdown',
    'package_dir': {'pyuvdata': 'pyuvdata'},
    'packages': [
        'pyuvdata',
        'pyuvdata.tests',
        'pyuvdata.uvbeam',
        'pyuvdata.uvcal',
        'pyuvdata.uvdata',
        'pyuvdata.uvflag',
    ],
    'cmdclass': {'build_ext': CustomBuildExtCommand},
    'ext_modules': [
        Extension(
            'pyuvdata._miriad',
            sources=[
                'pyuvdata/uvdata/src/miriad_wrap.cpp',
                'pyuvdata/uvdata/src/uvio.c',
                'pyuvdata/uvdata/src/hio.c',
                'pyuvdata/uvdata/src/pack.c',
                'pyuvdata/uvdata/src/bug.c',
                'pyuvdata/uvdata/src/dio.c',
                'pyuvdata/uvdata/src/headio.c',
                'pyuvdata/uvdata/src/maskio.c',
            ],
            define_macros=global_c_macros,
            include_dirs=['pyuvdata/uvdata/src']
        )
    ],
    'scripts': [fl for fl in glob.glob('scripts/*') if not os.path.isdir(fl)],
    'use_scm_version': {
        'local_scheme': branch_scheme
    },
    'include_package_data': True,
    'install_requires': ['numpy>=1.15', 'scipy', 'astropy>=3.2.3', 'h5py'],
    'tests_require': ['pytest', 'pytest-cases'],
    'extras_require': {
        'casa': casa_reqs,
        'healpix': healpix_reqs,
        'cst': cst_reqs,
        'all': casa_reqs + healpix_reqs + cst_reqs,
        'test': test_reqs,
        'doc': doc_reqs,
        'dev': test_reqs + doc_reqs
    },
    'classifiers': ['Development Status :: 5 - Production/Stable',
                    'Intended Audience :: Science/Research',
                    'License :: OSI Approved :: BSD License',
                    'Programming Language :: Python :: 3.6',
                    'Programming Language :: Python :: 3.7',
                    'Programming Language :: Python :: 3.8',
                    'Topic :: Scientific/Engineering :: Astronomy'],
    'keywords': 'radio astronomy interferometry'
}

if __name__ == '__main__':
    setup(**setup_args)
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