https://github.com/ctlab/quant3p
Tip revision: 81a33f0389e5e9b8ac778ee5b14f62af0d12b3a8 authored by Alexey Sergushichev on 28 November 2014, 17:56:51 UTC
exonic peaks -> intragenic peaks
exonic peaks -> intragenic peaks
Tip revision: 81a33f0
setup.py
from setuptools import setup
setup(name='quant3p',
version='0.1',
description='Tools to do 3\' RNA-seq quantification',
url='http://github.com/ctlab/quant3p',
author='Alexey Sergushichev',
author_email='alserg@rain.ifmo.ru',
license='Apache2',
packages=['quant3p'],
install_requires=[
'HTSeq',
'pysam',
'pybedtools >= 0.6.9',
'macs2 >= 2.1.0'
],
scripts=['bin/macs2-stranded', 'bin/quant3p'],
entry_points = {
'console_scripts': [
'fix-mm=quant3p.fixmm:main',
'gtf-extend=quant3p.gtfextend:main'],
},
zip_safe=False)