https://github.com/machinegun/hi-c-scaffold
Tip revision: 22242dce9c915bbb0d38dac46b7508de35be037e authored by Jay Ghurye on 21 November 2019, 15:14:57 UTC
hic link incremented, check logic changed in wrapper
hic link incremented, check logic changed in wrapper
Tip revision: 22242dc
| File | Mode | Size |
|---|---|---|
| LICENSE | -rw-r--r-- | 1.0 KB |
| Makefile | -rw-r--r-- | 387 bytes |
| README.md | -rw-r--r-- | 9.5 KB |
| RE_sites.py | -rwxr-xr-x | 2.9 KB |
| alignments2txt.py | -rwxr-xr-x | 4.7 KB |
| break_contigs.cpp | -rwxr-xr-x | 10.2 KB |
| break_contigs_start.cpp | -rwxr-xr-x | 11.7 KB |
| cmdline.h | -rwxr-xr-x | 18.3 KB |
| convert.sh | -rw-r--r-- | 932 bytes |
| correct.py | -rwxr-xr-x | 3.3 KB |
| correct_links.cpp | -rwxr-xr-x | 9.1 KB |
| fast_scaled_scores.py | -rwxr-xr-x | 2.8 KB |
| get_seq.py | -rwxr-xr-x | 3.7 KB |
| layout_unitigs.py | -rwxr-xr-x | 28.9 KB |
| make_links.py | -rwxr-xr-x | 7.0 KB |
| refactor_breaks.py | -rwxr-xr-x | 11.1 KB |
| run_pipeline.py | -rw-r--r-- | 18.9 KB |
| stitch.py | -rwxr-xr-x | 6.6 KB |
