https://github.com/dnanexus/viral-ngs
Tip revision: 82b9cc163094e3bf2c195e1b2bd540395cf4d75e authored by Chris Tomkins-Tinch on 01 September 2015, 20:31:55 UTC
Merge pull request #151 from broadinstitute/ct-formatting
Merge pull request #151 from broadinstitute/ct-formatting
Tip revision: 82b9cc1
| File | Mode | Size |
|---|---|---|
| docs | ||
| pipes | ||
| test | ||
| tools | ||
| travis | ||
| util | ||
| .coveragerc | -rw-r--r-- | 229 bytes |
| .gitignore | -rw-r--r-- | 692 bytes |
| .travis.yml | -rw-r--r-- | 684 bytes |
| LICENSE | -rw-r--r-- | 2.0 KB |
| README.md | -rw-r--r-- | 971 bytes |
| assembly.py | -rwxr-xr-x | 45.2 KB |
| broad_utils.py | -rwxr-xr-x | 13.1 KB |
| interhost.py | -rwxr-xr-x | 25.5 KB |
| intrahost.py | -rwxr-xr-x | 52.4 KB |
| ncbi.py | -rwxr-xr-x | 23.9 KB |
| read_utils.py | -rwxr-xr-x | 38.1 KB |
| reports.py | -rwxr-xr-x | 10.2 KB |
| requirements-docs.txt | -rw-r--r-- | 53 bytes |
| requirements-pipes.txt | -rw-r--r-- | 44 bytes |
| requirements.txt | -rw-r--r-- | 132 bytes |
| run_all_tests.sh | -rwxr-xr-x | 42 bytes |
| taxon_filter.py | -rwxr-xr-x | 31.6 KB |
