https://github.com/vinuesa/get_phylomarkers
Tip revision: 55ad63329cdbd8760e49ae8b9adaef2b88196ff4 authored by vinuesa on 04 April 2018, 13:51:36 UTC
added link to the bioRxiv preprint
added link to the bioRxiv preprint
Tip revision: 55ad633
| File | Mode | Size |
|---|---|---|
| bin | ||
| docs | ||
| lib | ||
| pop_gen_tables | ||
| test_sequences | ||
| .gitignore | -rw-r--r-- | 628 bytes |
| CHANGES.txt | -rw-r--r-- | 14.9 KB |
| INSTALL.md | -rw-r--r-- | 18.1 KB |
| LICENSE | -rw-r--r-- | 34.3 KB |
| README.md | -rw-r--r-- | 6.2 KB |
| add_labels2tree.pl | -rwxr-xr-x | 8.1 KB |
| add_nos2fasta_header.pl | -rwxr-xr-x | 578 bytes |
| compute_suppValStas_and_RF-dist.R | -rwxr-xr-x | 19.1 KB |
| concat_alignments.pl | -rwxr-xr-x | 3.0 KB |
| convert_aln_format_batch_bp.pl | -rwxr-xr-x | 2.2 KB |
| estimate_pangenome_phylogenies.sh | -rwxr-xr-x | 40.8 KB |
| install_R_deps.R | -rwxr-xr-x | 1.7 KB |
| pal2nal.pl | -rwxr-xr-x | 64.4 KB |
| popGen_summStats.pl | -rwxr-xr-x | 42.0 KB |
| remove_uninformative_sites_from_aln.pl | -rwxr-xr-x | 4.5 KB |
| rename.pl | -rwxr-xr-x | 3.2 KB |
| run_get_phylomarkers_pipeline.sh | -rwxr-xr-x | 102.7 KB |
| run_kdetrees.R | -rwxr-xr-x | 17.8 KB |
| run_parallel_cmmds.pl | -rwxr-xr-x | 2.1 KB |
| run_parallel_molecClock_test_with_paup.sh | -rwxr-xr-x | 26.8 KB |
| run_pexec_cmmds.sh | -rwxr-xr-x | 1.8 KB |
