https://github.com/DerrickWood/kraken
Tip revision: e75654f70c3d5672899075141ebf554a23bd790c authored by Jennifer Lu on 27 September 2021, 14:36:36 UTC
Fixing memory loading of kraken database
Fixing memory loading of kraken database
Tip revision: e75654f
| File | Mode | Size |
|---|---|---|
| add_to_library.sh | -rwxr-xr-x | 1.7 KB |
| build_kraken_db.sh | -rwxr-xr-x | 6.9 KB |
| check_for_jellyfish.sh | -rwxr-xr-x | 1.2 KB |
| clean_db.sh | -rwxr-xr-x | 1.4 KB |
| convert_gb_to_fa.pl | -rwxr-xr-x | 1.6 KB |
| cp_into_tempfile.pl | -rwxr-xr-x | 1.9 KB |
| download_genomic_library.sh | -rwxr-xr-x | 3.0 KB |
| download_taxonomy.sh | -rwxr-xr-x | 1.3 KB |
| kraken | -rwxr-xr-x | 8.6 KB |
| kraken-build | -rwxr-xr-x | 8.0 KB |
| kraken-filter | -rwxr-xr-x | 3.7 KB |
| kraken-mpa-report | -rwxr-xr-x | 5.3 KB |
| kraken-report | -rwxr-xr-x | 4.4 KB |
| kraken-translate | -rwxr-xr-x | 3.9 KB |
| krakenlib.pm | -rw-r--r-- | 3.3 KB |
| lookup_accession_numbers.pl | -rwxr-xr-x | 1.7 KB |
| read_merger.pl | -rwxr-xr-x | 5.3 KB |
| report_gi_numbers.pl | -rwxr-xr-x | 1.4 KB |
| rsync_from_ncbi.pl | -rwxr-xr-x | 5.4 KB |
| scan_fasta_file.pl | -rwxr-xr-x | 1.6 KB |
| shrink_db.sh | -rwxr-xr-x | 1.8 KB |
| standard_installation.sh | -rwxr-xr-x | 1.7 KB |
| upgrade_db.sh | -rwxr-xr-x | 2.5 KB |
| verify_gi_numbers.pl | -rwxr-xr-x | 1.5 KB |
