https://github.com/meglab2017/The-microbial-biosphere-of-the-coral-Acropora-cervicornis-in-Northeastern-Puerto-Rico
Tip revision: acf5851080b5159b1e19b3afd81d9782f203f9b4 authored by meglab2017 on 15 August 2017, 02:21:33 UTC
Update README.md
Update README.md
Tip revision: acf5851
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intermediaryfiles | ||
38distmatrix.csv | -rw-r--r-- | 4.9 KB |
Boxplots-sig-dif-taxa.R | -rw-r--r-- | 326 bytes |
Coral-PR-Otutables.xlsx | -rw-r--r-- | 104.1 KB |
Coral_Mapping.csv | -rw-r--r-- | 462 bytes |
Coral_Mapping.txt | -rw-r--r-- | 831 bytes |
DESeq2_g_test38.biom | -rw-r--r-- | 4.3 KB |
DESeq2_g_test38.txt | -rw-r--r-- | 4.0 KB |
DESeq2_g_test44.txt | -rw-r--r-- | 2.4 KB |
DESeq2_g_test44_tax.csv | -rw-r--r-- | 2.3 KB |
Depth_m_stats.txt | -rw-r--r-- | 152 bytes |
Figure 2 beta and alpha div.pdf | -rw-r--r-- | 1.2 MB |
Figure 4-ricketsialles.pdf | -rw-r--r-- | 793.2 KB |
Figure 5 core 100.pdf | -rw-r--r-- | 64.6 KB |
Figure3-taxaplots.pdf | -rw-r--r-- | 210.4 KB |
Figure6-small.tif | -rw-r--r-- | 8.2 MB |
README.md | -rw-r--r-- | 14.0 KB |
Table 1.png | -rw-r--r-- | 104.3 KB |
_config.yml | -rw-r--r-- | 26 bytes |
alpha_params.txt | -rw-r--r-- | 69 bytes |
anosim_results-fig2.txt | -rw-r--r-- | 164 bytes |
coral.biom | -rw-r--r-- | 240.3 KB |
coral.txt | -rw-r--r-- | 78.4 KB |
depth_stats-chao1rick.txt | -rw-r--r-- | 162 bytes |
gtest38.csv | -rw-r--r-- | 2.9 KB |
gtest_depth-ricketsialles-44.txt | -rw-r--r-- | 6.4 KB |
gtest_depth.txt | -rw-r--r-- | 5.9 KB |
heatmap-script-fig4.R | -rw-r--r-- | 1.9 KB |
heatmap-script-fig6.R | -rw-r--r-- | 1.9 KB |
heatmap_function.R | -rw-r--r-- | 15.5 KB |
list-coretaxa.txt | -rw-r--r-- | 214 bytes |
metacoral.txt | -rw-r--r-- | 87 bytes |
nmds-for-fig2B.R | -rw-r--r-- | 509 bytes |
norick.biom | -rw-r--r-- | 54.2 KB |
norick_obs_table.biom | -rw-r--r-- | 54.2 KB |
norick_rarefied_obs_table.biom | -rw-r--r-- | 54.2 KB |
otu_table-inicial.biom | -rw-r--r-- | 749.7 KB |
rarefied_obs_table.biom | -rw-r--r-- | 240.2 KB |
rep_set.fna | -rw-r--r-- | 17.9 MB |
rep_set.tre | -rw-r--r-- | 88.8 KB |
ricketsialles.biom | -rw-r--r-- | 216.7 KB |
ricketsialles.txt | -rw-r--r-- | 77.7 KB |
rickrarefied.biom | -rw-r--r-- | 216.3 KB |
signorickrick38.biom | -rw-r--r-- | 44.1 KB |
signorickrick38.txt | -rw-r--r-- | 5.0 KB |
sigrick44.biom | -rw-r--r-- | 44.1 KB |
taxa_summary_genus_script.R | -rw-r--r-- | 2.6 KB |
taxa_summary_phyla_script.R | -rw-r--r-- | 1.4 KB |
taxonomy_L2_R.txt | -rw-r--r-- | 1.3 KB |
taxonomy_L6_R.txt | -rw-r--r-- | 5.3 KB |