35325d2 | Prashant Pandey | 29 May 2018, 22:35:39 UTC | More refactoring. Getting closer. | 29 May 2018, 22:35:39 UTC |
db42e05 | Prashant Pandey | 11 May 2018, 19:34:35 UTC | checking in intermediate code. | 11 May 2018, 19:34:35 UTC |
a486bf4 | rtjohnso | 02 March 2018, 20:52:51 UTC | Merge pull request #28 from sjackman/patch-1 qf_serialize: Add the filename to the error message | 02 March 2018, 20:52:51 UTC |
dee0459 | Shaun Jackman | 27 February 2018, 16:56:18 UTC | qf_serialize: Add filename to error message | 27 February 2018, 16:59:24 UTC |
684ebb7 | Prashant Pandey | 25 January 2018, 18:57:37 UTC | Merge branch 'development' | 25 January 2018, 18:59:16 UTC |
6507097 | Prashant Pandey | 25 January 2018, 18:55:54 UTC | Adding instructions to use the script to calculate the log of the number of slots. | 25 January 2018, 18:55:54 UTC |
63d06de | Prashant Pandey | 25 January 2018, 18:51:34 UTC | Adding the script to estmiate the size of the CQF using the output from ntCard. | 25 January 2018, 18:51:34 UTC |
6741efd | Rob Patro | 07 December 2017, 15:38:02 UTC | update clipp | 07 December 2017, 15:38:02 UTC |
53c0ce4 | Rob Patro | 07 December 2017, 15:37:26 UTC | update clipp | 07 December 2017, 15:37:26 UTC |
5a17a02 | Rob Patro | 05 December 2017, 18:38:26 UTC | update clipp | 05 December 2017, 18:38:26 UTC |
29a8ee5 | Rob Patro | 05 December 2017, 18:38:02 UTC | update clipp | 05 December 2017, 18:38:02 UTC |
485b9d5 | Prashant Pandey | 30 November 2017, 16:41:59 UTC | Merge branch 'master' of github.com:splatlab/squeakr | 30 November 2017, 16:41:59 UTC |
c27fb52 | Prashant Pandey | 30 November 2017, 16:41:02 UTC | Merge branch 'development' | 30 November 2017, 16:41:05 UTC |
f9436cd | Rob Patro | 18 November 2017, 19:44:17 UTC | Merge branch 'development' | 30 November 2017, 16:40:43 UTC |
0217339 | Prashant Pandey | 30 November 2017, 16:38:46 UTC | Updating README. | 30 November 2017, 16:38:46 UTC |
27e9b49 | Prashant Pandey | 30 November 2017, 16:33:39 UTC | Fixing a minor bug in inner product CLI. | 30 November 2017, 16:33:39 UTC |
c9dca4b | Prashant Pandey | 30 November 2017, 16:25:46 UTC | Addig CLI interface to other two commands. | 30 November 2017, 16:25:46 UTC |
bd6ade1 | Rob Patro | 18 November 2017, 19:44:17 UTC | Merge branch 'development' | 18 November 2017, 19:44:19 UTC |
110be94 | Rob Patro | 18 November 2017, 19:43:32 UTC | Merge branch 'master' of https://github.com/splatlab/squeakr | 18 November 2017, 19:43:39 UTC |
3d71cf0 | Rob Patro | 18 November 2017, 19:38:09 UTC | Merge branch 'development' | 18 November 2017, 19:43:14 UTC |
4ca288b | Rob Patro | 18 November 2017, 19:42:55 UTC | Update README.md | 18 November 2017, 19:42:55 UTC |
ac4777b | Rob Patro | 18 November 2017, 19:38:09 UTC | Merge branch 'development' | 18 November 2017, 19:40:20 UTC |
cddfc92 | Rob Patro | 18 November 2017, 19:36:54 UTC | merge | 18 November 2017, 19:36:54 UTC |
b2e4489 | Rob Patro | 18 November 2017, 19:34:49 UTC | hold | 18 November 2017, 19:34:49 UTC |
e16bf41 | Rob Patro | 18 November 2017, 19:33:44 UTC | make sure this folder exists | 18 November 2017, 19:33:44 UTC |
20c699c | Prashant Pandey | 18 November 2017, 06:18:41 UTC | Work with the new CLI | 18 November 2017, 06:18:41 UTC |
01aa926 | rob-p | 17 November 2017, 03:28:08 UTC | merge | 17 November 2017, 03:28:08 UTC |
6799ad0 | rob-p | 17 November 2017, 03:26:51 UTC | prepare for merge with newest features | 17 November 2017, 03:26:51 UTC |
c860bbf | Prashant Pandey | 17 November 2017, 02:47:51 UTC | Adding code to pass a prefix as an argument. | 17 November 2017, 02:47:51 UTC |
7d813e6 | rob-p | 17 November 2017, 02:45:29 UTC | fix merge | 17 November 2017, 02:45:29 UTC |
277bca0 | rob-p | 17 November 2017, 02:44:58 UTC | add named paramaters to squeakr-count | 17 November 2017, 02:44:58 UTC |
8382a7b | Prashant Pandey | 17 November 2017, 02:28:13 UTC | Fixing a bug in naming the file. | 17 November 2017, 02:28:13 UTC |
558a107 | Prashant Pandey | 16 November 2017, 19:28:07 UTC | Adding code for enabling users to specify the k-mer size as in input parameter. | 16 November 2017, 19:28:07 UTC |
3e9bfdd | Prashant Pandey | 16 November 2017, 19:20:28 UTC | Merge branch 'master' of github.com:splatlab/squeakr | 16 November 2017, 19:20:28 UTC |
74f4455 | Prashant Pandey | 16 November 2017, 19:17:05 UTC | Merge branch 'development' of github.com:splatlab/squeakr into development | 16 November 2017, 19:17:05 UTC |
aa47530 | Prashant Pandey | 16 November 2017, 19:16:49 UTC | Adding scripts for merging. | 16 November 2017, 19:16:49 UTC |
a78c426 | Prashant Pandey | 14 November 2017, 18:47:46 UTC | Merge branch 'master' of github.com:splatlab/squeakr | 16 November 2017, 19:14:56 UTC |
4601cfd | Prashant Pandey | 16 November 2017, 19:12:11 UTC | Updating README. | 16 November 2017, 19:12:11 UTC |
63f6d76 | Prashant Pandey | 16 November 2017, 19:10:30 UTC | Adding code for enabling users to specify the k-mer size as in input parameter. | 16 November 2017, 19:10:30 UTC |
060ab36 | Prashant Pandey | 14 November 2017, 18:47:46 UTC | Merge branch 'master' of github.com:splatlab/squeakr | 14 November 2017, 18:47:46 UTC |
0c2ffe4 | Prashant Pandey | 14 November 2017, 18:47:40 UTC | Using the same seed for the hash function in every run. | 14 November 2017, 18:47:40 UTC |
2e7916c | Prashant Pandey | 09 November 2017, 17:24:36 UTC | Update README.md | 09 November 2017, 17:24:36 UTC |
818a7bf | Prashant Pandey | 09 November 2017, 17:22:23 UTC | Update README.md | 09 November 2017, 17:22:23 UTC |
e858595 | Prashant Pandey | 04 November 2017, 00:19:37 UTC | Moving a comment from gqf.c to the header file where it belongs. | 04 November 2017, 00:19:37 UTC |
0b1a790 | Prashant Pandey | 04 November 2017, 00:16:01 UTC | Removing SSL dependency. | 04 November 2017, 00:16:01 UTC |
f1e877d | Prashant Pandey | 31 October 2017, 00:26:50 UTC | Fixing a minor bug when you write a CQF to using qf_serialize and read it back using qf_read. | 31 October 2017, 00:26:50 UTC |
2e1af52 | Prashant Pandey | 19 September 2017, 01:54:14 UTC | Removed call to fallocate to preallocate space of the file on disk. | 19 September 2017, 01:54:14 UTC |
59c6f27 | Prashant Pandey | 18 September 2017, 16:16:27 UTC | Minor README tweaks. | 18 September 2017, 16:16:27 UTC |
55ee912 | Prashant Pandey | 18 September 2017, 04:21:31 UTC | Updating Makefile to append flags to CXX and LD instead of overwriting them. | 18 September 2017, 04:21:31 UTC |
e7de0a2 | Rob Patro | 18 September 2017, 02:48:25 UTC | changes to makefile | 18 September 2017, 02:48:25 UTC |
d7c2b5c | Prashant Pandey | 18 September 2017, 00:07:54 UTC | Adding help option and updating executable names. | 18 September 2017, 00:07:54 UTC |
83e47ce | Prashant Pandey | 08 September 2017, 20:57:21 UTC | Fixing a bug in the thread-safe CQF code. Also, updating the README with instructions about the query API. | 08 September 2017, 20:57:21 UTC |
ed9b52e | Prashant Pandey | 08 September 2017, 20:56:43 UTC | Merge branch 'master' of github.com:splatlab/squeakr | 08 September 2017, 20:56:43 UTC |
5853609 | Prashant Pandey | 08 September 2017, 20:56:21 UTC | Fixing a bug in the thread-safe CQF code. Also, updating the README with instructions about the query API. | 08 September 2017, 20:56:21 UTC |
6604ddf | Prashant Pandey | 08 May 2017, 21:39:48 UTC | Update README.md | 08 May 2017, 21:39:48 UTC |
8760147 | Prashant Pandey | 02 May 2017, 13:33:16 UTC | Changing the gzFile type to make it compatible for MAC OS 10.11 compatible. | 02 May 2017, 13:33:16 UTC |
f15a067 | Prashant Pandey | 02 May 2017, 13:07:52 UTC | Update README.md | 02 May 2017, 13:07:52 UTC |
4c60869 | Prashant Pandey | 02 May 2017, 13:07:05 UTC | Adding library dependencies in the README. Also, added a note that Squeakr currently only supports fastq file formats. | 02 May 2017, 13:07:05 UTC |
849dbe1 | Prashant Pandey | 12 April 2017, 02:09:49 UTC | Fixing a small assertion bug in the CQF. | 12 April 2017, 02:09:49 UTC |
7950058 | Prashant Pandey | 04 April 2017, 22:32:43 UTC | Update README.md | 04 April 2017, 22:32:43 UTC |
da534d3 | Prashant Pandey | 04 April 2017, 22:29:40 UTC | Added an alternate implementation of select on machine words to work on non-Haswell hardware. Also, updated the Makefile and removed libs folder. | 04 April 2017, 22:29:40 UTC |
6aa21e1 | Prashant Pandey | 04 March 2017, 01:20:37 UTC | Merge branch 'master' of github.com:splatlab/squeakr | 04 March 2017, 01:20:37 UTC |
641ec99 | Prashant Pandey | 04 March 2017, 01:20:25 UTC | Adding missing libraries. | 04 March 2017, 01:20:25 UTC |
27c0e7a | Prashant Pandey | 05 February 2017, 01:22:23 UTC | Update README.md | 05 February 2017, 01:22:23 UTC |
e1eeae6 | Prashant Pandey | 05 February 2017, 01:14:02 UTC | Update README.md | 05 February 2017, 01:14:02 UTC |
0278994 | Prashant Pandey | 05 February 2017, 00:22:35 UTC | Update README.md | 05 February 2017, 00:22:35 UTC |
2f20be8 | Prashant Pandey | 05 February 2017, 00:07:38 UTC | Update README.md | 05 February 2017, 00:07:38 UTC |
3374258 | Prashant Pandey | 05 February 2017, 00:06:30 UTC | Adding a sample query benchmark. | 05 February 2017, 00:06:30 UTC |
013a66e | Prashant Pandey | 04 February 2017, 23:46:14 UTC | Update README.md | 04 February 2017, 23:46:14 UTC |
8940c94 | Prashant Pandey | 04 February 2017, 23:21:09 UTC | Adding code for Squeakr. | 04 February 2017, 23:21:09 UTC |
4a94369 | Prashant Pandey | 04 February 2017, 22:09:14 UTC | Initial commit | 04 February 2017, 22:09:14 UTC |