| e248adf | renchao.lu | 08 October 2021, 11:56:41 UTC | Merge branch 'StorageCapacity' into 'master' [PL/CT] Incorporate the effect of change of storage capacity due to mineral dissolution-precipitation reaction See merge request ogs/ogs!3810 | 08 October 2021, 11:56:41 UTC |
| 8e09c17 | renchao_lu | 06 October 2021, 12:31:16 UTC | [T] update benchmark results. | 08 October 2021, 11:56:33 UTC |
| 7dc8926 | renchao_lu | 30 September 2021, 12:20:09 UTC | [PL/CT] compute A and rhs. | 08 October 2021, 11:56:33 UTC |
| 6550559 | renchao_lu | 30 September 2021, 12:19:39 UTC | [PL/CT] assemble global matrix K. | 08 October 2021, 11:56:33 UTC |
| 98de414 | renchao_lu | 30 September 2021, 12:17:58 UTC | [PL/CT] incorporate the effect of change of storage capacity. | 08 October 2021, 11:56:33 UTC |
| 9276e0a | renchao_lu | 30 September 2021, 12:14:27 UTC | [PL/CT] move forward into postSpeciationCalculation. | 08 October 2021, 11:56:33 UTC |
| ae99503 | Lars Bilke | 08 October 2021, 09:06:19 UTC | [web] Fix Win cli downloads for master. Thanks to @fzill for reporting! | 08 October 2021, 09:06:19 UTC |
| 46b7f1a | Dmitry Yu. Naumov | 07 October 2021, 18:49:16 UTC | Merge branch 'RemoveQtDependencyFromGeoTools' into 'master' Remove Qt dependency from MoveGeometry and TriangulatePolyline See merge request ogs/ogs!3829 | 07 October 2021, 18:49:16 UTC |
| 1836e43 | Thomas Fischer | 28 September 2021, 09:16:58 UTC | [A/U/GeoTools] Remove Qt dependency from tools. | 07 October 2021, 18:12:51 UTC |
| 8c71329 | Thomas Fischer | 28 September 2021, 09:17:09 UTC | [A/U/GeoTools] Substitute Qt dependent code by boost. | 07 October 2021, 18:12:51 UTC |
| 315f0eb | Dmitry Yu. Naumov | 07 October 2021, 18:10:06 UTC | Merge branch 'FixBugInHeatConductionProcess' into 'master' Fix HeatConductionProcess parallel (PETSc) build. See merge request ogs/ogs!3831 | 07 October 2021, 18:10:06 UTC |
| 657d2a1 | Thomas Fischer | 07 October 2021, 11:46:18 UTC | [T/HeatConduction] Test for parallel heat conduction. | 07 October 2021, 15:20:28 UTC |
| 9505d11 | Thomas Fischer | 07 October 2021, 11:18:26 UTC | [PL/HeatConduction] Finalize the global mats and vec. assembly. After the assembly of matrices and vectors it is required to finalize them. This fixes a bug in parallel version of ogs. | 07 October 2021, 15:20:28 UTC |
| 5e0bec1 | Tobias Meisel | 07 October 2021, 13:35:01 UTC | Merge branch 'update-xdmf' into 'master' [cpm] Update xdmf to fix CMake warnings. See merge request ogs/ogs!3830 | 07 October 2021, 13:35:01 UTC |
| 62167a5 | Lars Bilke | 07 October 2021, 09:18:07 UTC | cmake-format | 07 October 2021, 09:58:35 UTC |
| 086c190 | Lars Bilke | 07 October 2021, 09:17:23 UTC | [cpm] Update xdmf to fix CMake warnings. See https://gitlab.opengeosys.org/ogs/xdmflib/-/commit/2e2439f4c867e872bc3e646b01f6e081667c4b02. | 07 October 2021, 09:58:34 UTC |
| 7d226dc | Lars Bilke | 07 October 2021, 07:57:31 UTC | [web] Added note on using a different compiler. | 07 October 2021, 07:57:31 UTC |
| 155530d | Tom Fischer | 07 October 2021, 04:33:47 UTC | Merge branch 'FixPetscMatrixOptions' into 'master' [MaL/PETSc] Fix order of matrix options. Closes #3202 and #3203 See merge request ogs/ogs!3817 | 07 October 2021, 04:33:47 UTC |
| 9bdc4d6 | Jörg Buchwald | 05 October 2021, 18:27:21 UTC | add test using PETSc requiring mat_type seqaij for ILU | 06 October 2021, 15:40:20 UTC |
| 8f2b4fa | Dmitri Naumov | 01 October 2021, 18:28:49 UTC | [MatL/PETSc] Set default matrix type to 'aij'. This covers both, the serial and parallel cases: seqaij and mpiaij. The latter matrix type will not work for serial cases---#3203. | 06 October 2021, 15:40:20 UTC |
| b96e476 | Dmitri Naumov | 01 October 2021, 15:48:17 UTC | [MatL/PETSc] Remove unnecessary commented code. From the documentation https://petsc.org/release/docs/manualpages/Vec/VecSetUp.html: "For basic use of the Vec classes the user need not explicitly call VecSetUp(), since these actions will happen automatically." | 06 October 2021, 15:40:20 UTC |
| 78580bc | Dmitri Naumov | 01 October 2021, 15:46:25 UTC | [MaL/PETSc] Fix order of matrix options. The matrix type set through command line arguments was overriden by an extra call. Changing the orders assigns the command line options higher priority than the default aij matrix type. | 06 October 2021, 15:40:20 UTC |
| cbb921f | Lars Bilke | 06 October 2021, 11:54:42 UTC | Merge branch 'fix-hdf-mpi-check' into 'master' [cmake] Fixed hdf5 mpi check when using CPM for hdf5. See merge request ogs/ogs!3827 | 06 October 2021, 11:54:42 UTC |
| e5d2a18 | Lars Bilke | 06 October 2021, 10:33:42 UTC | [cmake] Fixed hdf5 mpi check when using CPM for hdf5. Check should executed only for system-wide hdf5 installs. When CPM is used the correct hdf5 configuration is guaranteed. | 06 October 2021, 10:33:42 UTC |
| c1f8aab | Dmitry Yu. Naumov | 06 October 2021, 10:05:54 UTC | Merge branch 'ImproveResetPropertiesInPolygonalRegionTool' into 'master' [A/U/ME] Add switch argument to tool ResetPropertiesInPolygonalRegion. See merge request ogs/ogs!3818 | 06 October 2021, 10:05:54 UTC |
| c555e84 | Thomas Fischer | 06 October 2021, 08:28:54 UTC | [MGTL/MeshEditing] Change for windows build. | 06 October 2021, 08:52:56 UTC |
| a225d03 | Thomas Fischer | 05 October 2021, 12:33:52 UTC | [A/U] Test for switch any_of in tool ResetPropertiesInPolygonalRegion. | 06 October 2021, 08:52:56 UTC |
| 62eb306 | Thomas Fischer | 01 October 2021, 20:11:20 UTC | [web] Document the new switch of the tool ResetPropertiesInPolygonalRegion. | 06 October 2021, 08:52:56 UTC |
| 2c88301 | Thomas Fischer | 14 September 2021, 12:37:44 UTC | [A/U/ME] Add switch arg to tool. A part of an element is inside of a polygon if at least one node is in the (convex) polygon. Sometimes it is useful to forster that all nodes of an element have to be in the polygon. With the new implemented switch argument the user can choose the behaviour of the algorithm. | 06 October 2021, 08:52:56 UTC |
| 1ec62b9 | Dmitry Yu. Naumov | 06 October 2021, 08:45:51 UTC | Merge branch 'SmallFixes' into 'master' Several independent changes See merge request ogs/ogs!3822 | 06 October 2021, 08:45:51 UTC |
| fe8a423 | Dmitry Yu. Naumov | 06 October 2021, 07:59:33 UTC | Merge branch 'THM_TRM_HeatFluxOutput' into 'master' THM/TRM Add heat flux output. See merge request ogs/ogs!3758 | 06 October 2021, 07:59:33 UTC |
| 3f6d340 | Dmitri Naumov | 04 October 2021, 16:06:22 UTC | [MGTL] clang-format some lambdas. | 06 October 2021, 07:37:29 UTC |
| 607acc4 | Dmitri Naumov | 29 September 2021, 09:19:27 UTC | [PL/HM] Rename tpl-arg for consistency w other pcs | 06 October 2021, 07:36:42 UTC |
| 9a24250 | Dmitri Naumov | 22 September 2021, 20:21:56 UTC | [MeL] Remove unused getNumberOfGlobalBaseNodes(). | 06 October 2021, 07:36:42 UTC |
| 649fbb4 | Dmitri Naumov | 20 September 2021, 13:47:59 UTC | [MeL/IO] Make readMeshFromFileSerial private. Move implementation to cpp in anonymous namespace. | 06 October 2021, 07:36:42 UTC |
| 60f3352 | Dmitri Naumov | 31 August 2021, 07:53:23 UTC | [T/TRM] A2; Add HeatFlux to the comparisons. | 06 October 2021, 07:31:33 UTC |
| 99a11f7 | Dmitri Naumov | 27 August 2021, 11:27:15 UTC | [T/THM] Update A2 references. Only HydraulicFlow and NodalForces mismatched after a fix of their output in previous commit. Adding HeatFlux to comparisons and relax tolerances for now corrected NodalForces. | 06 October 2021, 07:31:33 UTC |
| c49a8d5 | Dmitri Naumov | 27 August 2021, 10:31:59 UTC | [PL/THM/TRM] Add heat flux output. | 06 October 2021, 07:31:33 UTC |
| eb3c7b8 | Dmitry Yu. Naumov | 05 October 2021, 22:02:49 UTC | Merge branch 'MeshLibElementCleanup' into 'master' [MeL] Move neighbour information from Node to Mesh. See merge request ogs/ogs!3819 | 05 October 2021, 22:02:49 UTC |
| 2a483a6 | Thomas Fischer | 09 July 2021, 15:15:16 UTC | [MeL] Mv neighbor information from Node to Mesh. | 05 October 2021, 20:56:20 UTC |
| e8af0af | Dmitry Yu. Naumov | 05 October 2021, 20:55:05 UTC | Merge branch 'FixPadilla_NaCl1' into 'master' [RCT] re-enable the PadillaNaCl1 test case Closes #3178 See merge request ogs/ogs!3826 | 05 October 2021, 20:55:05 UTC |
| bc4b9b2 | Lars Bilke | 05 October 2021, 17:54:49 UTC | Merge branch 'FixMemLeakInMeshLib' into 'master' Fix memory leak in MeshLib Closes #3195 See merge request ogs/ogs!3824 | 05 October 2021, 17:54:49 UTC |
| dac1701 | renchao_lu | 05 October 2021, 15:21:32 UTC | [T] relax absolute tolerance. | 05 October 2021, 15:21:32 UTC |
| cc0251f | renchao_lu | 05 October 2021, 15:20:49 UTC | [T] re-enable the Padilla_NaCl1 test case. | 05 October 2021, 15:20:49 UTC |
| e35cda5 | Dmitry Yu. Naumov | 05 October 2021, 14:34:16 UTC | Merge branch 'PhaseField' into 'master' Energy output by computeEnergy has been updated. See merge request ogs/ogs!3806 | 05 October 2021, 14:34:16 UTC |
| 3166ab9 | KeitaYoshioka | 05 October 2021, 12:18:19 UTC | [PL/PhF] Fix energy computation in parallel sims. The summation of the output energies and the pressure work was incorrectly computed at the partition boundaries. | 05 October 2021, 12:19:31 UTC |
| 96465f6 | KeitaYoshioka | 29 September 2021, 11:35:35 UTC | [PL/PhF] Correct energy computation for AT1/AT2. The computation is different for the two models. | 05 October 2021, 12:16:10 UTC |
| 8bd0e13 | Thomas Fischer | 04 October 2021, 13:23:29 UTC | [MGTL] Use Line or Line3 constr. instead of Element::clone. | 05 October 2021, 11:26:07 UTC |
| 4e7fecf | Thomas Fischer | 04 October 2021, 13:09:36 UTC | [MeL] Fix mem leak in TemplateElement constructor. | 05 October 2021, 11:26:07 UTC |
| 1c0b1e8 | Dmitry Yu. Naumov | 05 October 2021, 10:55:07 UTC | Merge branch 'container-cpu-target' into 'master' [ci] Better cpu target handling (`march` / `mtune`) See merge request ogs/ogs!3820 | 05 October 2021, 10:55:07 UTC |
| 5b636d6 | Lars Bilke | 05 October 2021, 06:58:14 UTC | [ci] Fix TH2M switch. Cannot add a comment between CMake arguments (hides all remaining args). | 05 October 2021, 06:58:14 UTC |
| c904f62 | Lars Bilke | 04 October 2021, 09:26:45 UTC | [cmake] Removed option OGS_ENABLE_AVX2. | 04 October 2021, 09:29:47 UTC |
| 6544777 | Lars Bilke | 04 October 2021, 08:34:42 UTC | [ci] Bump container cpu-target to ivybridge (envinf2). | 04 October 2021, 09:29:47 UTC |
| 82a38bd | Lars Bilke | 04 October 2021, 08:33:55 UTC | [ci] Set container cpu-target as a global variable. | 04 October 2021, 09:29:47 UTC |
| e377aa0 | Lars Bilke | 04 October 2021, 08:30:39 UTC | [ci] Use container-makers --cpu-target flag. | 04 October 2021, 09:29:47 UTC |
| ee47dc9 | Lars Bilke | 04 October 2021, 07:10:00 UTC | Merge branch 'fix-win' into 'master' [ci] Disable TH2M on Windows Closes #3197 See merge request ogs/ogs!3801 | 04 October 2021, 07:10:00 UTC |
| b9ba034 | Lars Bilke | 04 October 2021, 06:33:27 UTC | [ci] Temporarily disable TH2M on Windows. | 04 October 2021, 06:33:27 UTC |
| 731a947 | Dmitry Yu. Naumov | 01 October 2021, 21:57:45 UTC | Merge branch 'MplConvertAssertsToFatals' into 'master' [MPL] Convert asserts to OGS_FATAL in dValue(). See merge request ogs/ogs!3811 | 01 October 2021, 21:57:45 UTC |
| c10d458 | Dmitri Naumov | 01 October 2021, 19:31:42 UTC | [T/TH2M] Liakopoulos; slightly relax vtkdiff tol. | 01 October 2021, 20:57:01 UTC |
| 5448360 | Dmitri Naumov | 28 September 2021, 14:22:32 UTC | [MPL] Convert asserts to OGS_FATAL in dValue(). Avoids taking unimplemented derivatives. Also fix few typos in error messages. | 01 October 2021, 20:57:01 UTC |
| b8ce717 | Dmitry Yu. Naumov | 01 October 2021, 20:52:00 UTC | Merge branch 'FixingTesZeoliteCtest' into 'master' Fixing TES Zeolite ctest. Closes #3198 See merge request ogs/ogs!3815 | 01 October 2021, 20:52:00 UTC |
| 8a63aad | Dmitri Naumov | 01 October 2021, 18:56:32 UTC | [T/TES] Use direct solver in Zeolite Newton test. | 01 October 2021, 18:56:39 UTC |
| 3f51786 | Dmitri Naumov | 01 October 2021, 11:32:23 UTC | [T/TES] Change time stepping for Zeolite Newton. Update the ctest config for updated time step output. The reference files are still the same, no changes required. | 01 October 2021, 18:38:49 UTC |
| f63a01b | Lars Bilke | 01 October 2021, 14:01:47 UTC | Merge branch 'van_genuchten_exp' into 'master' correcting van Genuchten exponent in doc: exchange m and n Closes #3181 See merge request ogs/ogs!3814 | 01 October 2021, 14:01:47 UTC |
| 4fbb2f8 | Lars Bilke | 01 October 2021, 13:27:53 UTC | Merge branch 'check-hdf5-mpi' into 'master' [cmake] Check for hdf5 mpi config at cmake time. See merge request ogs/ogs!3812 | 01 October 2021, 13:27:53 UTC |
| 9775452 | Lars Bilke | 01 October 2021, 13:24:35 UTC | Merge branch 'web-cmake-preset' into 'master' [web] Fixed required CMake version when using presets. See merge request ogs/ogs!3813 | 01 October 2021, 13:24:35 UTC |
| 0a990f6 | Dmitry Yu. Naumov | 01 October 2021, 11:28:47 UTC | Merge branch 'TH2M_McWorther_H2' into 'master' [T/TH2M] H2 Benchmark McWorther See merge request ogs/ogs!3798 | 01 October 2021, 11:28:47 UTC |
| 7008a4d | joergbuchwald | 01 October 2021, 11:26:42 UTC | correcting van Genuchten exponent in doc: exchange m and n | 01 October 2021, 11:26:42 UTC |
| 8380df4 | Lars Bilke | 01 October 2021, 08:01:36 UTC | [web] Fixed required CMake version when using presets. | 01 October 2021, 11:11:18 UTC |
| 3047317 | Dmitri Naumov | 01 October 2021, 09:51:56 UTC | [T/TH2M] Slightly relax tolerance for gas pressure | 01 October 2021, 09:52:12 UTC |
| 09431e0 | Dmitri Naumov | 29 September 2021, 19:25:41 UTC | [PL/TH2M] Extend dfW_4_LWpGa with k_over_mu_X'. | 01 October 2021, 09:18:58 UTC |
| 027522d | Dmitri Naumov | 29 September 2021, 19:06:31 UTC | [PL/TH2M] dfW_4_LWpC derivatives. | 01 October 2021, 09:18:58 UTC |
| a504e6a | Dmitri Naumov | 29 September 2021, 18:53:42 UTC | [PL/TH2M] Rename dfW_4 to specific dfW_4_LWpG_. Needed before adding the dfW_4_LWpC parts. | 01 October 2021, 09:18:58 UTC |
| 7577fb8 | Dmitri Naumov | 29 September 2021, 20:20:03 UTC | [PL/TH2M] dk_over_mu_G_dp* and dk_over_mu_L_dp*. Derivatives used in the advection related parts of the Jacobian. | 01 October 2021, 09:18:56 UTC |
| dda1185 | Dmitri Naumov | 29 September 2021, 18:07:54 UTC | [T/TH2M] H2; Newton version of the McWorther test. Reference files are copies of the original reference files, because windows symbolic links do not work. | 01 October 2021, 09:18:26 UTC |
| 9f5b517 | Norbert Grunwald | 24 September 2021, 07:30:01 UTC | [T/TH2M] H2 Benchmark McWorther | 01 October 2021, 09:18:26 UTC |
| 9e1d4ea | Dmitry Yu. Naumov | 01 October 2021, 07:04:24 UTC | Merge branch 'TH2M_Jacobian_cleanup' into 'master' Smaller cleanups of TH2M's Jacobian. See merge request ogs/ogs!3800 | 01 October 2021, 07:04:24 UTC |
| 798f79b | Dmitri Naumov | 24 September 2021, 14:05:12 UTC | [PL/TH2M] Make drho_LR_dT and drho_SR_dT local. | 30 September 2021, 19:47:14 UTC |
| 75dcfa9 | Dmitri Naumov | 23 September 2021, 14:42:34 UTC | [PL/TH2M] Comment ds_L/dp_GR and drho_GR/dp_cap=0. Leaving the comments for now for easier check of the derivatives. | 30 September 2021, 19:47:14 UTC |
| 0f03d92 | Dmitry Yu. Naumov | 30 September 2021, 13:27:08 UTC | Merge branch 'SmallImprovements' into 'master' [MeL] Small code quality improvements. See merge request ogs/ogs!3799 | 30 September 2021, 13:27:08 UTC |
| ccb3939 | Lars Bilke | 30 September 2021, 12:38:29 UTC | [cmake] Check for hdf5 mpi config at cmake time. | 30 September 2021, 13:12:25 UTC |
| fd0e760 | Thomas Fischer | 13 July 2021, 10:49:47 UTC | [MeL] Element::addNeighbor: Avoid to fetch the dimension twice. | 30 September 2021, 12:24:00 UTC |
| 4443392 | Thomas Fischer | 13 July 2021, 10:48:42 UTC | [MeL] Make *Element::getDimension a constexpr. | 30 September 2021, 12:24:00 UTC |
| 589a3a2 | Thomas Fischer | 12 July 2021, 13:15:35 UTC | [MeL/MG] Add fwd. decl. to VtkMeshConverter. | 30 September 2021, 12:24:00 UTC |
| 4fcc8bb | Lars Bilke | 30 September 2021, 10:32:49 UTC | Increase nonlinear solver iterations in tes-1D-zeolite-discharge-small-newton.prj. Related #3198, updated compiler on vis-f90. | 30 September 2021, 10:32:49 UTC |
| efb8408 | Lars Bilke | 30 September 2021, 07:57:02 UTC | Merge branch 'fix-log-artifact' into 'master' [ctest] Changed log file extension from .log to .txt. See merge request ogs/ogs!3807 | 30 September 2021, 07:57:02 UTC |
| 0af2a62 | Lars Bilke | 30 September 2021, 07:03:14 UTC | Merge branch 'notebook-artifact' into 'master' [ci] Notebook artifacts See merge request ogs/ogs!3808 | 30 September 2021, 07:03:14 UTC |
| 2ba2e83 | Lars Bilke | 29 September 2021, 12:58:35 UTC | [ctest] Changed log file extension from .log to .txt. Should fix CI artifact rendering in the browser. See https://gitlab.com/gitlab-org/gitlab/-/issues/211517. | 30 September 2021, 06:41:54 UTC |
| 51758d7 | wenqing | 29 September 2021, 15:05:56 UTC | Merge branch 'TH2M_strain_perm' into 'master' [TH2M] Enable to use pressure, strain, stress dependent permeability models See merge request ogs/ogs!3804 | 29 September 2021, 15:05:56 UTC |
| 38b2d52 | Lars Bilke | 29 September 2021, 13:04:11 UTC | [ci] Save (processed) jupyter notebooks as artifacts. | 29 September 2021, 13:04:11 UTC |
| 1b48316 | Lars Bilke | 29 September 2021, 13:01:40 UTC | [ci] Don't store jupyter sif images as artifact. | 29 September 2021, 13:01:40 UTC |
| 29b62ea | Wenqing Wang | 28 September 2021, 14:13:07 UTC | [TH2M] Enable to use pressure, strain, stress dependent permeability models | 29 September 2021, 12:44:37 UTC |
| e2b75f2 | Lars Bilke | 29 September 2021, 09:37:41 UTC | Merge branch 'jupyter-ogs' into 'master' [ci] Added ogs-serial-jupyter container image. Closes #3193 See merge request ogs/ogs!3776 | 29 September 2021, 09:37:41 UTC |
| 5909998 | Lars Bilke | 28 September 2021, 13:53:02 UTC | Formatting .gitlab-ci.yml. | 28 September 2021, 13:53:02 UTC |
| 89aab5d | Lars Bilke | 27 September 2021, 11:39:02 UTC | Added GitLab integration into ogs-serial-jupyter image. | 28 September 2021, 13:52:25 UTC |
| b6f44f7 | Lars Bilke | 22 September 2021, 13:39:36 UTC | [web] Added notes on Windows usage. | 28 September 2021, 13:52:25 UTC |
| fd7eacd | Lars Bilke | 22 September 2021, 10:11:47 UTC | [web] Use generated notebook output. | 28 September 2021, 13:52:25 UTC |
| 2da30e6 | Lars Bilke | 22 September 2021, 09:06:48 UTC | [ci] Enabled mfront (with Python bindings) in ogs-serial-jupyter image. | 28 September 2021, 13:52:24 UTC |
| f6aab1b | Lars Bilke | 22 September 2021, 09:06:48 UTC | [ci] Enabled mfront (with Python bindings) in ogs-serial-jupyter image. | 28 September 2021, 13:52:24 UTC |
| 650310f | Lars Bilke | 20 September 2021, 19:31:49 UTC | [ci ]Added h5py to ogs-serial-jupyter image. | 28 September 2021, 13:52:23 UTC |
