2975e80 | Antonio Foncubierta Rodríguez | 15 April 2021, 16:54:42 UTC | Merge pull request #3 from histocartography/fix-travis-vm Fixed the travis build | 15 April 2021, 16:54:42 UTC |
e4ead74 | Antonio Foncubierta Rodriguez | 15 April 2021, 14:21:52 UTC | fix: travis vm size | 15 April 2021, 14:21:52 UTC |
36ab191 | Antonio Foncubierta Rodríguez | 14 April 2021, 12:30:51 UTC | Reducing num_workers for test on Travis CI | 14 April 2021, 12:30:51 UTC |
3378592 | Antonio Foncubierta Rodríguez | 14 April 2021, 12:30:36 UTC | Reducing num_workers for test on Travis CI | 14 April 2021, 12:30:36 UTC |
a9e43a6 | Antonio Foncubierta Rodríguez | 14 April 2021, 12:30:06 UTC | Reducing num_workers for test on Travis CI | 14 April 2021, 12:30:06 UTC |
4022a42 | Antonio Foncubierta Rodríguez | 14 April 2021, 11:46:27 UTC | Update knn_graph_builder.yml | 14 April 2021, 11:46:27 UTC |
6486e84 | Antonio Foncubierta Rodríguez | 14 April 2021, 08:58:49 UTC | Update README.md | 14 April 2021, 08:58:49 UTC |
dadbe3c | Antonio Foncubierta Rodríguez | 14 April 2021, 08:56:16 UTC | Create .travis.yml | 14 April 2021, 08:56:16 UTC |
c8ecd8a | Antonio Foncubierta Rodríguez | 13 April 2021, 09:07:39 UTC | Create LICENSE.md | 13 April 2021, 09:07:39 UTC |
4fbcbdb | Antonio Foncubierta Rodriguez | 13 April 2021, 08:37:05 UTC | fix: | 13 April 2021, 08:38:31 UTC |
ab460c3 | Guillaume Jaume | 12 April 2021, 08:27:09 UTC | Update README.md | 12 April 2021, 08:27:09 UTC |
e342ebe | Guillaume Jaume | 12 April 2021, 08:19:45 UTC | Update README.md | 12 April 2021, 08:19:45 UTC |
ff6f756 | Guillaume Jaume | 12 April 2021, 08:17:42 UTC | Update README.md | 12 April 2021, 08:17:42 UTC |
79bda40 | Guillaume Jaume | 12 April 2021, 07:51:16 UTC | Merge pull request #117 from GraphsZRL/cleanup/gnnexplainer/gja Cleanup/gnnexplainer/gja | 12 April 2021, 07:51:16 UTC |
69be80e | Guillaume Jaume | 12 April 2021, 07:50:39 UTC | Merge pull request #119 from GraphsZRL/cleanup/ml_docstring/gja Cleanup/ml docstring/gja | 12 April 2021, 07:50:39 UTC |
e66761e | Guillaume Jaume | 12 April 2021, 07:50:26 UTC | Merge pull request #118 from GraphsZRL/cleanup/feat_extraction/gja Cleanup/feat extraction/gja | 12 April 2021, 07:50:26 UTC |
4d2407a | Guillaume Jaume | 12 April 2021, 07:19:10 UTC | Merge branch 'cleanup/stable' into cleanup/gnnexplainer/gja | 12 April 2021, 07:19:10 UTC |
cc43854 | Guillaume Jaume | 12 April 2021, 07:17:42 UTC | Merge pull request #116 from GraphsZRL/preprocess/gbuild/pus fixed graph build issues + UT | 12 April 2021, 07:17:42 UTC |
8f8c62c | pus | 09 April 2021, 19:42:12 UTC | fixed graph building bug | 09 April 2021, 19:42:12 UTC |
31cc8ec | Guillaume Jaume | 09 April 2021, 15:40:42 UTC | ut w/ batch as input | 09 April 2021, 15:40:42 UTC |
c683eab | Guillaume Jaume | 09 April 2021, 15:38:04 UTC | simplify input types of CG and TG GNN | 09 April 2021, 15:38:04 UTC |
b0e1497 | Guillaume Jaume | 09 April 2021, 15:37:35 UTC | gnnexplainer w/ list of graphs | 09 April 2021, 15:37:35 UTC |
316bcf4 | Guillaume Jaume | 09 April 2021, 15:36:25 UTC | graph lrp w/ list of graphs | 09 April 2021, 15:36:25 UTC |
0cbd152 | Guillaume Jaume | 09 April 2021, 15:30:00 UTC | cleanup docstring | 09 April 2021, 15:30:00 UTC |
73e47aa | Guillaume Jaume | 09 April 2021, 12:20:43 UTC | add patch size to graph buidling tests | 09 April 2021, 12:20:43 UTC |
f0f4fa5 | Guillaume Jaume | 09 April 2021, 11:36:07 UTC | aug deep feat return as nr_instance, nr_aug, dim | 09 April 2021, 11:36:07 UTC |
c44cb5a | pus | 09 April 2021, 11:22:13 UTC | graph build include comments | 09 April 2021, 11:22:13 UTC |
003cc99 | Guillaume Jaume | 09 April 2021, 10:27:32 UTC | unify docstring | 09 April 2021, 10:27:32 UTC |
84f136c | Guillaume Jaume | 09 April 2021, 10:20:08 UTC | round to address corner case where centroid would be outside image | 09 April 2021, 10:20:08 UTC |
2b29d0c | Guillaume Jaume | 09 April 2021, 10:12:32 UTC | cleanup aug feat extraction + add defaults arg | 09 April 2021, 10:12:32 UTC |
ca9ba03 | Guillaume Jaume | 09 April 2021, 10:12:03 UTC | set patch size to 72 | 09 April 2021, 10:12:03 UTC |
fb6bf7f | Guillaume Jaume | 09 April 2021, 10:11:41 UTC | adapt feat extraction ut | 09 April 2021, 10:11:41 UTC |
2b14728 | Guillaume Jaume | 09 April 2021, 08:48:27 UTC | fix bug with colormap as attr | 09 April 2021, 08:48:27 UTC |
a038581 | Guillaume Jaume | 09 April 2021, 08:10:58 UTC | Better doc | 09 April 2021, 08:10:58 UTC |
47df371 | Guillaume Jaume | 08 April 2021, 18:06:43 UTC | set default location for saving example data | 08 April 2021, 18:06:43 UTC |
8080a32 | Guillaume Jaume | 07 April 2021, 09:28:04 UTC | add fc to download example images | 07 April 2021, 09:28:04 UTC |
180013e | Guillaume Jaume | 07 April 2021, 08:59:53 UTC | test output type | 07 April 2021, 08:59:53 UTC |
0bba4cb | Guillaume Jaume | 07 April 2021, 08:53:32 UTC | concepts returned as np instead of torch | 07 April 2021, 08:53:32 UTC |
da53baf | Guillaume Jaume | 07 April 2021, 07:14:54 UTC | fix bug: load pretrained model in cg ut | 07 April 2021, 07:14:54 UTC |
bb98edb | pus | 06 April 2021, 14:24:16 UTC | fixed graph build issues + UT | 06 April 2021, 14:24:16 UTC |
7cb1479 | Guillaume Jaume | 04 April 2021, 16:48:52 UTC | renaming in lrp | 04 April 2021, 16:48:52 UTC |
e529e0c | Guillaume Jaume | 04 April 2021, 16:31:24 UTC | cleanup model conversion from dgl to dense gnn layers | 04 April 2021, 16:31:24 UTC |
2443d6b | Guillaume Jaume | 04 April 2021, 15:40:59 UTC | Merge pull request #115 from GraphsZRL/clean/rmunused/gja Clean/rmunused/gja | 04 April 2021, 15:40:59 UTC |
d24de68 | Guillaume Jaume | 04 April 2021, 10:52:33 UTC | needed for travis at the moment | 04 April 2021, 10:52:33 UTC |
8d6c156 | Guillaume Jaume | 04 April 2021, 09:40:11 UTC | Add missing include in test viz | 04 April 2021, 09:40:11 UTC |
f365407 | Guillaume Jaume | 04 April 2021, 09:38:29 UTC | renaming in io | 04 April 2021, 09:38:29 UTC |
2e9ffbd | Guillaume Jaume | 04 April 2021, 09:37:12 UTC | cleanup includes + cuda devices | 04 April 2021, 09:37:12 UTC |
bb583f4 | Guillaume Jaume | 04 April 2021, 09:25:43 UTC | rm constants in preprocessing | 04 April 2021, 09:25:43 UTC |
dd6c8f7 | Guillaume Jaume | 04 April 2021, 09:22:01 UTC | rm unused config file | 04 April 2021, 09:22:01 UTC |
e85835a | Guillaume Jaume | 04 April 2021, 09:20:54 UTC | rm constants in models | 04 April 2021, 09:20:54 UTC |
18d845e | Guillaume Jaume | 04 April 2021, 09:18:33 UTC | rm unused includes | 04 April 2021, 09:18:33 UTC |
e8eaae9 | Guillaume Jaume | 04 April 2021, 09:14:47 UTC | rm concat graph model | 04 April 2021, 09:14:47 UTC |
e860a27 | Guillaume Jaume | 04 April 2021, 09:13:26 UTC | rm obsolete metric files | 04 April 2021, 09:13:26 UTC |
a15b4ce | Guillaume Jaume | 04 April 2021, 09:11:46 UTC | rm readme in interpretability | 04 April 2021, 09:11:46 UTC |
9e19531 | Guillaume Jaume | 04 April 2021, 09:10:59 UTC | docker is currently not supported | 04 April 2021, 09:10:59 UTC |
6ac5f8c | Guillaume Jaume | 04 April 2021, 09:10:11 UTC | rm setup.py tbr by setup.cfg | 04 April 2021, 09:10:11 UTC |
c8ab3fa | Guillaume Jaume | 04 April 2021, 08:43:36 UTC | rm requirements (only env.yml is used) | 04 April 2021, 08:43:36 UTC |
7ad3f5d | Guillaume Jaume | 04 April 2021, 08:41:49 UTC | rm experiments folder | 04 April 2021, 08:41:49 UTC |
efffe84 | Guillaume Jaume | 03 April 2021, 16:29:20 UTC | Merge pull request #109 from GraphsZRL/preprocess/assignmat/pus Assignment matrix in preprocessing | 03 April 2021, 16:29:20 UTC |
0705a8a | Guillaume Jaume | 03 April 2021, 11:44:52 UTC | fix bug w/ output name | 03 April 2021, 11:44:52 UTC |
66d87d2 | Guillaume Jaume | 03 April 2021, 11:36:12 UTC | fix bug w/ output name | 03 April 2021, 11:36:12 UTC |
8685a99 | Guillaume Jaume | 03 April 2021, 11:02:54 UTC | rebase + fix conflicts | 03 April 2021, 11:02:54 UTC |
ea53b17 | pus | 01 April 2021, 15:38:40 UTC | fixed assignmat + config naming | 03 April 2021, 10:53:07 UTC |
ffc1f32 | pus | 01 April 2021, 12:53:34 UTC | include assignment matrix | 03 April 2021, 10:53:07 UTC |
0c88835 | Guillaume Jaume | 03 April 2021, 10:37:37 UTC | graphgradcam test with saving output | 03 April 2021, 10:37:37 UTC |
43fb1e5 | Guillaume Jaume | 03 April 2021, 10:23:24 UTC | fix gnn explainer compatibility | 03 April 2021, 10:23:24 UTC |
40327dc | Guillaume Jaume | 03 April 2021, 10:22:33 UTC | fix graph lrp compatibility | 03 April 2021, 10:22:33 UTC |
bcbf976 | Guillaume Jaume | 03 April 2021, 10:21:24 UTC | add ut for gradcam + fix compatibility with new pipeline | 03 April 2021, 10:21:24 UTC |
2f8f43e | Guillaume Jaume | 03 April 2021, 09:47:24 UTC | fix compatibility with new pipeline + rm unused var | 03 April 2021, 09:56:16 UTC |
b92950a | pus | 31 March 2021, 10:57:06 UTC | include workers | 03 April 2021, 09:56:16 UTC |
a8ee76e | pus | 31 March 2021, 10:54:19 UTC | optimize deep feature extraction | 03 April 2021, 09:56:16 UTC |
7109cea | Valentin Anklin | 02 April 2021, 19:17:18 UTC | Adapt tests to work with new pipeline interface | 03 April 2021, 09:54:27 UTC |
d21dd37 | Valentin Anklin | 02 April 2021, 15:39:02 UTC | Fix missing adaption | 03 April 2021, 09:54:27 UTC |
167d4e9 | Valentin Anklin | 02 April 2021, 15:08:38 UTC | Adapt feature extraction to new pipeline interface | 03 April 2021, 09:54:27 UTC |
10e1e2c | Valentin Anklin | 02 April 2021, 15:08:20 UTC | Fix types | 03 April 2021, 09:54:27 UTC |
ad9761d | Valentin Anklin | 01 April 2021, 13:51:16 UTC | Update docstrings of pipeline and fix tuple return typre | 03 April 2021, 09:54:27 UTC |
27f1637 | Valentin Anklin | 31 March 2021, 10:01:08 UTC | Add initial version of new pipeline | 03 April 2021, 09:54:26 UTC |
3419753 | Valentin Anklin | 26 March 2021, 10:01:47 UTC | Ignore checkpoints dir created by tests | 03 April 2021, 09:54:26 UTC |
c18f086 | Guillaume Jaume | 01 April 2021, 14:55:23 UTC | gnn explainer ut | 01 April 2021, 14:55:23 UTC |
aa4c338 | Guillaume Jaume | 01 April 2021, 14:55:01 UTC | gradcam ut | 01 April 2021, 14:55:01 UTC |
4b2ff37 | Guillaume Jaume | 01 April 2021, 14:54:42 UTC | LRP ut | 01 April 2021, 14:54:42 UTC |
ab94015 | Guillaume Jaume | 01 April 2021, 13:17:10 UTC | tg ut checkpoint | 01 April 2021, 13:17:10 UTC |
5a4e170 | Guillaume Jaume | 01 April 2021, 13:16:49 UTC | models zoo | 01 April 2021, 13:16:49 UTC |
966db67 | Guillaume Jaume | 01 April 2021, 13:16:23 UTC | cg ut checkpoint | 01 April 2021, 13:16:23 UTC |
5cdc2e9 | Guillaume Jaume | 01 April 2021, 13:15:44 UTC | ut hhact checkpoints | 01 April 2021, 13:15:44 UTC |
51274c6 | Guillaume Jaume | 31 March 2021, 17:56:02 UTC | wip: test CG checkpoints | 31 March 2021, 17:56:02 UTC |
7b1c15e | Guillaume Jaume | 31 March 2021, 17:33:19 UTC | wip: load checkpoints | 31 March 2021, 17:33:19 UTC |
ad08f1a | Guillaume Jaume | 31 March 2021, 17:33:06 UTC | wip: ensure consistent keyword arg and config params | 31 March 2021, 17:33:06 UTC |
ad3be0b | Guillaume Jaume | 31 March 2021, 17:32:00 UTC | ut TG checkpoints | 31 March 2021, 17:32:00 UTC |
6bdca84 | Guillaume Jaume | 31 March 2021, 11:28:49 UTC | Merge pull request #108 from GraphsZRL/feature/optimize/pus Optimization of feature extraction | 31 March 2021, 11:28:49 UTC |
18d1f1e | pus | 31 March 2021, 10:57:06 UTC | include workers | 31 March 2021, 10:57:06 UTC |
c48c148 | pus | 31 March 2021, 10:54:19 UTC | optimize deep feature extraction | 31 March 2021, 10:54:19 UTC |
8c595a0 | Guillaume Jaume | 31 March 2021, 10:10:01 UTC | cleanup utils + rm dataloders | 31 March 2021, 10:10:01 UTC |
427de2d | Guillaume Jaume | 30 March 2021, 16:09:04 UTC | rn partial anno arg from config | 30 March 2021, 16:09:04 UTC |
7e8373f | Guillaume Jaume | 30 March 2021, 15:02:26 UTC | enable ml ut | 30 March 2021, 15:02:26 UTC |
9f9731d | Guillaume Jaume | 30 March 2021, 14:55:52 UTC | feat: add the option to concat norm centroid + deep feat as node feats | 30 March 2021, 14:55:52 UTC |
25f7c59 | Guillaume Jaume | 29 March 2021, 17:23:07 UTC | add image size as graph data | 29 March 2021, 17:23:07 UTC |
07a0fa3 | Guillaume Jaume | 29 March 2021, 17:22:45 UTC | skipping in dev ut | 29 March 2021, 17:22:45 UTC |
2eb75c9 | Guillaume Jaume | 29 March 2021, 16:08:55 UTC | rm test data from github | 29 March 2021, 16:08:55 UTC |
72e8c8a | Guillaume Jaume | 29 March 2021, 16:07:56 UTC | download ut data from box | 29 March 2021, 16:07:56 UTC |