| d717cf8 | Jakob Vanhoefer | 25 January 2021, 11:41:01 UTC | over_write -> overwrite | 25 January 2021, 11:41:01 UTC |
| 2264e46 | Jakob Vanhoefer | 25 January 2021, 11:35:07 UTC | fix merge conflicts | 25 January 2021, 11:35:07 UTC |
| d7274bc | Dilan Pathirana | 22 January 2021, 21:36:44 UTC | Sorensen example (#63) Co-authored-by: Jakob Vanhoefer <jakob.vanhoefer@uni-bonn.de> | 22 January 2021, 21:36:44 UTC |
| c703ca7 | Jakob Vanhoefer | 22 January 2021, 17:11:09 UTC | change comment | 22 January 2021, 17:11:09 UTC |
| 2dc270a | Jakob Vanhoefer | 22 January 2021, 16:33:31 UTC | try version parsing as in pypesto | 22 January 2021, 16:33:31 UTC |
| d3e7727 | martamatos | 19 January 2021, 22:20:22 UTC | docs: Add sphinx docs, draft | 19 January 2021, 22:20:22 UTC |
| 79be234 | Jakob Vanhoefer | 18 January 2021, 22:10:18 UTC | add new example to example README | 18 January 2021, 22:10:18 UTC |
| aecc3d7 | Jakob Vanhoefer | 18 January 2021, 22:06:10 UTC | add Model Editor Examples notebook | 18 January 2021, 22:06:10 UTC |
| 5a2d831 | Jakob Vanhoefer | 18 January 2021, 22:02:03 UTC | fix load model with missing blcok, fixes#61 | 18 January 2021, 22:02:03 UTC |
| c93bc68 | Jakob Vanhoefer | 18 January 2021, 22:00:51 UTC | fix time | 18 January 2021, 22:00:51 UTC |
| 513b169 | Jakob Vanhoefer | 17 January 2021, 20:44:09 UTC | fix parsing version string | 17 January 2021, 20:44:09 UTC |
| 48756d7 | Jakob Vanhoefer | 17 January 2021, 15:52:29 UTC | add __version__ and automated reading in... | 17 January 2021, 15:52:29 UTC |
| 1afbc73 | Jakob Vanhoefer | 16 January 2021, 11:26:09 UTC | Merge pull request #48 from yaml2sbml-dev/feature_tests Improve tests (closes #18, #34) | 16 January 2021, 11:26:09 UTC |
| 7e5b69c | Jakob Vanhoefer | 16 January 2021, 10:45:36 UTC | redo install test deps | 16 January 2021, 10:45:36 UTC |
| 1ce985d | Jakob Vanhoefer | 16 January 2021, 10:41:09 UTC | fix Yanniks review | 16 January 2021, 10:41:09 UTC |
| 716e396 | Jakob Vanhoefer | 15 January 2021, 22:22:11 UTC | add nbmake installation | 15 January 2021, 22:22:11 UTC |
| fbaf841 | Jakob Vanhoefer | 15 January 2021, 22:19:38 UTC | add flake8 installation | 15 January 2021, 22:19:38 UTC |
| bf807f1 | Jakob Vanhoefer | 15 January 2021, 20:15:17 UTC | second try chmod | 15 January 2021, 20:15:17 UTC |
| d4eed11 | Jakob Vanhoefer | 15 January 2021, 20:08:27 UTC | change permission shell test scripts | 15 January 2021, 20:08:27 UTC |
| 9167a9c | Jakob Vanhoefer | 15 January 2021, 19:07:49 UTC | fix flake8 test command | 15 January 2021, 19:07:49 UTC |
| 1cb693d | Jakob Vanhoefer | 15 January 2021, 18:43:11 UTC | change to github workflows | 15 January 2021, 18:43:11 UTC |
| 9a23a00 | Jakob Vanhoefer | 15 January 2021, 18:04:00 UTC | Merge pull request #54 from yannikschaelte/master closes #53 Move tests to github actions; add optional amici dependency | 15 January 2021, 18:04:00 UTC |
| aaec8b2 | yannikschaelte | 15 January 2021, 17:36:31 UTC | make cache sys dep | 15 January 2021, 17:36:31 UTC |
| 7962112 | yannikschaelte | 15 January 2021, 17:31:36 UTC | mini edit | 15 January 2021, 17:31:36 UTC |
| e733f78 | yannikschaelte | 15 January 2021, 17:13:51 UTC | add badges | 15 January 2021, 17:13:51 UTC |
| b7eef9d | yannikschaelte | 15 January 2021, 17:09:53 UTC | fix | 15 January 2021, 17:09:53 UTC |
| 227a1d6 | yannikschaelte | 15 January 2021, 17:08:46 UTC | cache | 15 January 2021, 17:08:46 UTC |
| b2a6406 | yannikschaelte | 15 January 2021, 17:04:57 UTC | make executable | 15 January 2021, 17:04:57 UTC |
| 0e55623 | yannikschaelte | 15 January 2021, 17:04:06 UTC | add amici | 15 January 2021, 17:04:06 UTC |
| 975917c | yannikschaelte | 15 January 2021, 16:57:18 UTC | fix | 15 January 2021, 16:57:18 UTC |
| 4c8049e | yannikschaelte | 15 January 2021, 16:56:33 UTC | fix | 15 January 2021, 16:56:33 UTC |
| f203036 | yannikschaelte | 15 January 2021, 16:55:41 UTC | move to codecov | 15 January 2021, 16:55:41 UTC |
| f681cae | yannikschaelte | 15 January 2021, 16:45:07 UTC | test2 | 15 January 2021, 16:45:07 UTC |
| 415ae4c | yannikschaelte | 15 January 2021, 16:43:04 UTC | test | 15 January 2021, 16:43:04 UTC |
| 57b6b68 | yannikschaelte | 15 January 2021, 16:37:24 UTC | move tests to gh actions | 15 January 2021, 16:37:24 UTC |
| 915a25b | Jakob Vanhoefer | 15 January 2021, 14:06:52 UTC | travis install amici/pypesto | 15 January 2021, 14:06:52 UTC |
| 7798dc7 | Jakob Vanhoefer | 15 January 2021, 11:05:44 UTC | add test requirements | 15 January 2021, 11:05:44 UTC |
| 60589d5 | Jakob Vanhoefer | 15 January 2021, 10:54:54 UTC | add include_package_data=True to setup.py | 15 January 2021, 10:54:54 UTC |
| bed69a4 | Jakob Vanhoefer | 15 January 2021, 10:49:03 UTC | Merge branch 'master' into feature_tests | 15 January 2021, 10:49:03 UTC |
| 215b111 | Jakob Vanhoefer | 15 January 2021, 10:44:57 UTC | add MANIFEST | 15 January 2021, 10:44:57 UTC |
| bc92c17 | Jakob Vanhoefer | 15 January 2021, 10:35:14 UTC | Merge branch 'master' into feature_tests | 15 January 2021, 10:35:14 UTC |
| 4e67da4 | Jakob Vanhoefer | 14 January 2021, 22:51:35 UTC | Merge pull request #52 from yaml2sbml-dev/feature_validation_in_examples Feature validation in examples closes #51 | 14 January 2021, 22:51:35 UTC |
| 9086129 | Jakob Vanhoefer | 14 January 2021, 22:27:03 UTC | review comments | 14 January 2021, 22:27:03 UTC |
| d8e79f4 | Jakob Vanhoefer | 14 January 2021, 20:33:15 UTC | add valdiation secion in python Lotka Volterra notebook | 14 January 2021, 20:33:15 UTC |
| e9be8db | Jakob Vanhoefer | 14 January 2021, 20:22:02 UTC | add CLI validation in examples | 14 January 2021, 20:22:02 UTC |
| 03347c3 | Jakob Vanhoefer | 14 January 2021, 20:20:32 UTC | remove validation message from yaml2sbml command | 14 January 2021, 20:20:32 UTC |
| 1ff8772 | Jakob Vanhoefer | 14 January 2021, 20:19:11 UTC | Merge branch 'master' into feature_validation_in_examples | 14 January 2021, 20:19:11 UTC |
| 5ad0cb8 | Jakob Vanhoefer | 14 January 2021, 20:13:26 UTC | change location print | 14 January 2021, 20:13:26 UTC |
| 92f37d4 | Jakob Vanhoefer | 14 January 2021, 10:23:58 UTC | Merge pull request #47 from yaml2sbml-dev/feature_CLI_validation add CLI for yaml_validation closes #42 | 14 January 2021, 10:23:58 UTC |
| 068050b | Jakob Vanhoefer | 14 January 2021, 09:51:31 UTC | Merge pull request #50 from yaml2sbml-dev/feature_no_warnings ignore warning closes #49 | 14 January 2021, 09:51:31 UTC |
| 8a121f3 | Jakob Vanhoefer | 12 January 2021, 22:00:28 UTC | adapt notebook | 12 January 2021, 22:00:28 UTC |
| 06e39ac | Jakob Vanhoefer | 12 January 2021, 18:32:39 UTC | ignore warning | 12 January 2021, 18:32:39 UTC |
| 5feec8d | Jakob Vanhoefer | 12 January 2021, 17:35:36 UTC | redo yaml SCHEMA dir | 12 January 2021, 17:35:36 UTC |
| 43ed3be | Jakob Vanhoefer | 12 January 2021, 17:04:24 UTC | fix path name | 12 January 2021, 17:04:24 UTC |
| 620b9d4 | Jakob Vanhoefer | 12 January 2021, 17:03:55 UTC | fix flake8 | 12 January 2021, 17:03:55 UTC |
| eecf8f5 | Jakob Vanhoefer | 12 January 2021, 16:47:10 UTC | fix travis | 12 January 2021, 16:47:10 UTC |
| dd1098e | Jakob Vanhoefer | 12 January 2021, 16:27:10 UTC | add tests for command line + notebooks | 12 January 2021, 16:27:10 UTC |
| 1793e0c | Jakob Vanhoefer | 12 January 2021, 16:26:38 UTC | add flags for CLI | 12 January 2021, 16:26:38 UTC |
| 17e9d9e | Jakob Vanhoefer | 12 January 2021, 16:06:54 UTC | add help to yaml2sbml CLI | 12 January 2021, 16:06:54 UTC |
| 62cdd2b | Jakob Vanhoefer | 12 January 2021, 12:52:37 UTC | add+fix flake8 | 12 January 2021, 13:02:30 UTC |
| f1c8fb3 | Jakob Vanhoefer | 12 January 2021, 12:54:20 UTC | Revert "add+fix flake8" This reverts commit e5b429c08a5362f2fc7208990669821b418fb51e. | 12 January 2021, 12:54:20 UTC |
| e5b429c | Jakob Vanhoefer | 12 January 2021, 12:52:37 UTC | add+fix flake8 | 12 January 2021, 12:52:37 UTC |
| 6cc23ea | Jakob Vanhoefer | 12 January 2021, 11:02:08 UTC | change CLIs name | 12 January 2021, 11:02:08 UTC |
| 0c268bc | Jakob Vanhoefer | 12 January 2021, 10:58:49 UTC | add CLI for yaml_validation | 12 January 2021, 10:58:49 UTC |
| 6a46299 | Jakob Vanhoefer | 11 January 2021, 17:59:33 UTC | Merge pull request #45 from yaml2sbml-dev/fix_write_yaml improve readability of exported yaml closes #44 | 11 January 2021, 17:59:33 UTC |
| 6c3d1c4 | Jakob Vanhoefer | 11 January 2021, 17:59:01 UTC | Merge pull request #46 from yaml2sbml-dev/feature_examples Rework examples folder closes #33 | 11 January 2021, 17:59:01 UTC |
| 0f3bd2a | Jakob Vanhoefer | 11 January 2021, 14:54:21 UTC | add optional requirements | 11 January 2021, 14:54:21 UTC |
| 698d6bb | Jakob Vanhoefer | 11 January 2021, 14:54:04 UTC | fix yaml formatting | 11 January 2021, 14:54:04 UTC |
| 6ed9049 | Jakob Vanhoefer | 11 January 2021, 14:30:54 UTC | fix Dilans remarks README | 11 January 2021, 14:30:54 UTC |
| e677c88 | Jakob Vanhoefer | 11 January 2021, 12:06:02 UTC | move examples to doc/examples | 11 January 2021, 12:06:02 UTC |
| f0aae1a | Jakob Vanhoefer | 11 January 2021, 11:59:50 UTC | move examples to doc/examples | 11 January 2021, 11:59:50 UTC |
| 4418cd0 | Jakob Vanhoefer | 11 January 2021, 11:57:01 UTC | adapt gitignore | 11 January 2021, 11:57:01 UTC |
| 8a55065 | Jakob Vanhoefer | 10 January 2021, 12:30:10 UTC | initial commit examples | 10 January 2021, 12:30:10 UTC |
| 3ce2a8d | Jakob Vanhoefer | 09 January 2021, 17:16:47 UTC | improve readibility of exported yaml | 09 January 2021, 17:16:47 UTC |
| f689bae | Jakob Vanhoefer | 29 November 2020, 20:32:05 UTC | Merge pull request #40 from yaml2sbml-dev/fix_time Fix time, closes #38 #39 | 29 November 2020, 20:32:05 UTC |
| 4717ffd | Jakob Vanhoefer | 29 November 2020, 13:33:32 UTC | review comments | 29 November 2020, 13:33:32 UTC |
| 09bf699 | Jakob Vanhoefer | 29 November 2020, 13:20:54 UTC | fix tests | 29 November 2020, 13:20:54 UTC |
| 32edf89 | Jakob Vanhoefer | 29 November 2020, 13:14:25 UTC | fix #38 | 29 November 2020, 13:14:25 UTC |
| f0f61f8 | Jakob Vanhoefer | 29 November 2020, 13:13:28 UTC | fix #39 | 29 November 2020, 13:13:28 UTC |
| bfb9a46 | Jakob Vanhoefer | 18 November 2020, 16:22:57 UTC | Merge pull request #37 from yaml2sbml-dev/feature_yaml_model_editor fix _get_reduced_model() | 18 November 2020, 16:22:57 UTC |
| 37f8f2f | Jakob Vanhoefer | 18 November 2020, 11:14:40 UTC | fix bug _get_reduced_model() | 18 November 2020, 11:14:40 UTC |
| a30f807 | Jakob Vanhoefer | 18 November 2020, 10:42:55 UTC | Introduce the YamlModel editor, closes #35 Yaml Model Editor | 18 November 2020, 10:42:55 UTC |
| 4cd50f2 | Jakob Vanhoefer | 18 November 2020, 10:17:02 UTC | fix is_set_time | 18 November 2020, 10:17:02 UTC |
| 9b5d540 | Jakob Vanhoefer | 18 November 2020, 10:11:31 UTC | fix comment: dict keys | 18 November 2020, 10:11:31 UTC |
| 716bea8 | Jakob Vanhoefer | 18 November 2020, 07:08:18 UTC | fix comments | 18 November 2020, 07:08:18 UTC |
| 87b05ed | Jakob Vanhoefer | 17 November 2020, 19:30:18 UTC | fix None filtering | 17 November 2020, 19:30:18 UTC |
| b88aec2 | Jakob Vanhoefer | 17 November 2020, 16:34:22 UTC | add PEtab export for YamlModel | 17 November 2020, 16:34:22 UTC |
| d3b57b0 | Jakob Vanhoefer | 17 November 2020, 10:34:36 UTC | fix import | 17 November 2020, 10:34:36 UTC |
| 4fca20a | Jakob Vanhoefer | 16 November 2020, 16:55:49 UTC | fix observables | 16 November 2020, 16:55:49 UTC |
| 0663d67 | Jakob Vanhoefer | 16 November 2020, 16:55:08 UTC | initial commit YamlModel | 16 November 2020, 16:55:08 UTC |
| 7558a61 | Jakob Vanhoefer | 28 October 2020, 16:46:26 UTC | Merge pull request #32 from yaml2sbml-dev/feature_API_separation separate API, closes #31 | 28 October 2020, 16:46:26 UTC |
| 6e5e9a2 | Jakob Vanhoefer | 27 October 2020, 18:28:21 UTC | forgot to add the tests | 27 October 2020, 18:28:21 UTC |
| cae3e6d | Jakob Vanhoefer | 27 October 2020, 17:36:28 UTC | separate API | 27 October 2020, 17:36:28 UTC |
| af592aa | Jakob Vanhoefer | 20 October 2020, 10:31:43 UTC | conditionName is not required in conditions | 20 October 2020, 10:31:43 UTC |
| df8aa8b | Marta Matos | 16 October 2020, 09:40:07 UTC | Merge pull request #30 from yaml2sbml-dev/update_badges Update badge links in README | 16 October 2020, 09:40:07 UTC |
| 9f8c09d | Marta Matos | 16 October 2020, 09:39:29 UTC | Merge pull request #26 from yaml2sbml-dev/yaml_validation Add yaml schema validation | 16 October 2020, 09:39:29 UTC |
| c0add14 | Jakob Vanhoefer | 16 October 2020, 09:33:46 UTC | allow for more general right hand sides | 16 October 2020, 09:33:46 UTC |
| 273f3b7 | Jakob Vanhoefer | 16 October 2020, 09:29:43 UTC | delete misleading comment | 16 October 2020, 09:29:43 UTC |
| e30ce02 | Jakob Vanhoefer | 13 October 2020, 15:28:08 UTC | get rid of circular dependencies | 13 October 2020, 15:28:08 UTC |
| 6507fcd | Jakob Vanhoefer | 13 October 2020, 15:27:37 UTC | add jsonschema to requirements | 13 October 2020, 15:27:37 UTC |
