| a92d4aa | jiwoncpark | 04 August 2020, 22:12:45 UTC | Stop tracking deleted psf fits files | 04 August 2020, 22:12:45 UTC |
| cf877fa | jiwoncpark | 04 August 2020, 22:07:18 UTC | Enable errors in magnification | 04 August 2020, 22:07:18 UTC |
| af26dde | jiwoncpark | 04 August 2020, 22:05:51 UTC | Fix merge conflict | 04 August 2020, 22:05:51 UTC |
| 82a1d73 | jiwoncpark | 04 August 2020, 22:04:48 UTC | Install fastell4py | 04 August 2020, 22:04:48 UTC |
| 537f521 | jiwoncpark | 04 August 2020, 22:03:37 UTC | Allow sampling from transformed kappa | 04 August 2020, 22:03:37 UTC |
| 8653386 | Ji Won Park | 03 August 2020, 18:55:01 UTC | Merge pull request #52 from jiwoncpark/issue/51 changed the code to seperate the psf kwargs from the psf models | 03 August 2020, 18:55:01 UTC |
| b8c8163 | Sebastian Wagner-Carena | 03 August 2020, 18:45:12 UTC | fixed everything except test on ADU comparison in noise and issue with passing kwargs for lens equation to TDCosmography class in lenstronomy | 03 August 2020, 18:45:12 UTC |
| 09bc57f | Sebastian Wagner-Carena | 03 August 2020, 18:04:50 UTC | should have installed scikit-image | 03 August 2020, 18:04:50 UTC |
| 336f910 | Sebastian Wagner-Carena | 03 August 2020, 17:55:14 UTC | need skimage | 03 August 2020, 17:55:14 UTC |
| 35b7442 | Sebastian Wagner-Carena | 03 August 2020, 17:38:50 UTC | make some changes to travis.yaml file to see if we can get things working | 03 August 2020, 17:38:50 UTC |
| d7afab9 | Sebastian Wagner-Carena | 30 July 2020, 05:18:37 UTC | added vectorized distributions for hierarchical inference | 30 July 2020, 05:18:37 UTC |
| d0f1bc7 | jiwoncpark | 04 July 2020, 05:04:11 UTC | Check PSF 150 back in | 04 July 2020, 05:04:11 UTC |
| 0a8bb4c | jiwoncpark | 04 July 2020, 05:03:01 UTC | Enable sampling of reparameterized kappa | 04 July 2020, 05:03:01 UTC |
| 081a18d | Sebastian Wagner-Carena | 03 July 2020, 23:59:52 UTC | Merge remote-tracking branch 'origin/master' into issue/51 | 03 July 2020, 23:59:52 UTC |
| 3fc8139 | Sebastian Wagner-Carena | 03 July 2020, 00:52:11 UTC | made the approximation for uniform have a constant slope as the test desires | 03 July 2020, 00:52:11 UTC |
| 9745ea5 | Sebastian Wagner-Carena | 03 July 2020, 00:45:24 UTC | as a bonus, made the uniform distribution function a numbda function | 03 July 2020, 00:45:24 UTC |
| 5911c6a | jiwoncpark | 24 June 2020, 10:14:40 UTC | Spell out fastell4py install | 24 June 2020, 10:14:40 UTC |
| 936e902 | jiwoncpark | 24 June 2020, 09:53:34 UTC | Add fastell4py to try to make Travis happy | 24 June 2020, 09:53:34 UTC |
| 59917da | jiwoncpark | 24 June 2020, 09:49:37 UTC | Init ImageModel to work in the no-AGN case | 24 June 2020, 09:49:37 UTC |
| 3056539 | Sebastian Wagner-Carena | 19 June 2020, 01:54:21 UTC | changed the code to seperate the psf kwargs from the psf models | 19 June 2020, 01:54:21 UTC |
| 239873b | jiwoncpark | 12 June 2020, 03:22:24 UTC | Fix magnification bug in which the unlensed image had the intrinsic amplitude of point sources, but lensed so the flux was overestimated by the factor of image number | 12 June 2020, 03:22:24 UTC |
| cb347a5 | jiwoncpark | 12 June 2020, 01:09:56 UTC | Fix lens equation precision to 0.05 because 0.08 (current pixel size) yields erratic image number | 12 June 2020, 01:09:56 UTC |
| fd335ee | jiwoncpark | 11 June 2020, 07:34:50 UTC | Restrict image number rejection to images with AGN (bug fix) | 11 June 2020, 07:34:50 UTC |
| 7604522 | jiwoncpark | 11 June 2020, 07:21:52 UTC | Define PSF and aperture kwargs in tdcosmo local dictionary (a hack) rather than passing them into KinematicsAPI's velocity_dispersion_analytical | 11 June 2020, 07:21:52 UTC |
| 1e5bb3e | jiwoncpark | 11 June 2020, 07:02:24 UTC | Update SPEMD to PEMD, following Lenstronomy update | 11 June 2020, 07:02:24 UTC |
| c5acbb0 | jiwoncpark | 11 June 2020, 06:22:33 UTC | Remove unused kwargs in flux calculation methods | 11 June 2020, 06:22:33 UTC |
| ef70d20 | jiwoncpark | 11 June 2020, 06:20:58 UTC | Fix typo in x_image, y_image key | 11 June 2020, 06:20:58 UTC |
| e6b5c09 | jiwoncpark | 11 June 2020, 06:20:42 UTC | Have DiagonalCosmoCNNPrior export the image positions that were used to generate the time delays | 11 June 2020, 06:20:42 UTC |
| fcbcd72 | jiwoncpark | 30 May 2020, 07:13:02 UTC | Do not pass in lens light kwargs, as it's not needed, and pass in ps kwargs | 30 May 2020, 07:13:02 UTC |
| e8f395d | jiwoncpark | 30 May 2020, 07:12:03 UTC | Include AGN light in the unlensed image for magnification computation | 30 May 2020, 07:12:03 UTC |
| 48eb7d8 | jiwoncpark | 26 May 2020, 08:12:53 UTC | Fix typo in metadata keys to export | 26 May 2020, 08:12:53 UTC |
| 45d580c | jiwoncpark | 25 May 2020, 06:30:08 UTC | Render the unlensed source on a pixel grid for computing total magnification. If using the analytically integrated surface brightness, you need to multiply by the num_pix (bug fix) | 25 May 2020, 06:30:08 UTC |
| 7c70c9d | jiwoncpark | 25 May 2020, 05:40:17 UTC | Ensure numerical consistency between time delays and image positions | 25 May 2020, 05:40:17 UTC |
| 54686d0 | jiwoncpark | 21 May 2020, 20:14:57 UTC | Enable pure numpy noise generation | 21 May 2020, 20:14:57 UTC |
| 0664c7e | jiwoncpark | 21 May 2020, 20:13:37 UTC | Make velocity dispersion the latent variable for theta_E, gamma, q | 21 May 2020, 20:13:37 UTC |
| 022bae0 | jiwoncpark | 21 May 2020, 20:12:39 UTC | Switch to PEMD from SPEMD, per lenstronomy update | 21 May 2020, 20:12:39 UTC |
| cf934e2 | jiwoncpark | 22 April 2020, 19:57:49 UTC | Remove fitting errors and add intrinsic errors | 22 April 2020, 19:57:49 UTC |
| 4d64949 | jiwoncpark | 22 April 2020, 19:51:54 UTC | Enable sampling of gamma from vel disp | 22 April 2020, 19:51:54 UTC |
| 12cf9e1 | jiwoncpark | 22 April 2020, 19:45:12 UTC | Modify default models for lens mass axis ratio and redshift offset | 22 April 2020, 19:45:12 UTC |
| 897c1a9 | jiwoncpark | 15 April 2020, 18:55:40 UTC | Switch to simpler error realization for gamma, from error propagation | 15 April 2020, 18:55:40 UTC |
| 5753f43 | jiwoncpark | 11 March 2020, 23:03:09 UTC | Enable option to NOT reject examples with unmatching time delay and image position lengths, for testing purposes | 11 March 2020, 23:03:09 UTC |
| 36081b3 | jiwoncpark | 10 March 2020, 18:42:34 UTC | Fix bug in PSF rotation (indent error) | 10 March 2020, 18:42:34 UTC |
| be25f97 | jiwoncpark | 04 March 2020, 02:34:40 UTC | Improve image finding precision for generate_image_simple (for DC2 verification) | 04 March 2020, 02:34:40 UTC |
| 1d6ed69 | jiwoncpark | 28 February 2020, 01:58:05 UTC | Make FindBrightImage even more numerically precise | 28 February 2020, 01:58:05 UTC |
| 48ca401 | jiwoncpark | 27 February 2020, 01:25:58 UTC | Add missing asterisk in precision limit (bug) | 27 February 2020, 01:25:58 UTC |
| 302bf07 | jiwoncpark | 27 February 2020, 01:25:07 UTC | Update precision config for findBrightImage to match the default for td_cosmography.time_delays so that the number of images, their positions, and the number of time delays are consistent | 27 February 2020, 01:25:07 UTC |
| 960ddbd | jiwoncpark | 09 February 2020, 08:10:12 UTC | Enable a simpler way of generating the images that takes in amp rather than magnitude and doesn't calculate magnification | 09 February 2020, 08:10:12 UTC |
| 32e3748 | jiwoncpark | 09 February 2020, 08:09:44 UTC | Enable background_noise calculation in torch without entering unnecessary variables | 09 February 2020, 08:09:44 UTC |
| 417c58e | swagnercarena | 08 February 2020, 01:47:39 UTC | Merge pull request #47 from jiwoncpark/issue/46 Changed the variable in tf noise model causing the code to crash | 08 February 2020, 01:47:39 UTC |
| 7f4fdec | Sebastian Wagner-Carena | 08 February 2020, 00:16:08 UTC | changed variable name | 08 February 2020, 00:16:08 UTC |
| 7941787 | Ji Won Park | 07 February 2020, 21:34:21 UTC | Merge pull request #45 from jiwoncpark/issue/44 Fixed bug in lognorm. | 07 February 2020, 21:34:21 UTC |
| a975714 | Sebastian Wagner-Carena | 07 February 2020, 21:27:35 UTC | fixed bug in lognorm | 07 February 2020, 21:27:35 UTC |
| 5cc1193 | jiwoncpark | 07 February 2020, 02:37:58 UTC | Follow the new import path for noise models | 07 February 2020, 02:37:58 UTC |
| 128054c | jiwoncpark | 07 February 2020, 02:37:37 UTC | Update baobab configs to not specify noise-related parameters and give hyperparameters for FlatLCDM | 07 February 2020, 02:37:37 UTC |
| 433fc3d | jiwoncpark | 07 February 2020, 02:30:27 UTC | Import FlatLambdaCDM (bug) | 07 February 2020, 02:30:27 UTC |
| a249eb7 | jiwoncpark | 07 February 2020, 02:28:49 UTC | Hardcode noiseless image generation | 07 February 2020, 02:28:49 UTC |
| becebc2 | jiwoncpark | 07 February 2020, 02:27:56 UTC | Simplify cosmology to flat LCDM for consistency with H0rton | 07 February 2020, 02:27:56 UTC |
| 853a753 | jiwoncpark | 06 February 2020, 23:55:12 UTC | Merge branch 'master' of https://github.com/jiwoncpark/baobab | 06 February 2020, 23:55:12 UTC |
| b999683 | jiwoncpark | 06 February 2020, 23:55:06 UTC | Hardcode baobab to generate noiseless images | 06 February 2020, 23:55:06 UTC |
| 49cba8b | Ji Won Park | 06 February 2020, 03:47:08 UTC | Merge pull request #43 from jiwoncpark/issue/42 Issue/42 | 06 February 2020, 03:47:08 UTC |
| d8e4d64 | Sebastian Wagner-Carena | 05 February 2020, 17:41:57 UTC | added numba to requirements file | 05 February 2020, 17:41:57 UTC |
| 38fbf0e | Sebastian Wagner-Carena | 05 February 2020, 17:32:39 UTC | implemented new numba function, tested that they improve evaluation speed, and made sure they still give the same output as scipy functions | 05 February 2020, 17:32:39 UTC |
| 5ad9c79 | jiwoncpark | 05 February 2020, 16:14:25 UTC | Merge branch 'master' of https://github.com/jiwoncpark/baobab | 05 February 2020, 16:14:25 UTC |
| 7662c05 | jiwoncpark | 05 February 2020, 16:14:15 UTC | Enable user to optionally NOT add noise by setting cfg.image.add_noise to False -- note this is different from setting background_noise to zero as background noise includes sky and readout but not CCD | 05 February 2020, 16:14:15 UTC |
| 1780ef2 | Ji Won Park | 31 January 2020, 19:49:30 UTC | Merge pull request #39 from jiwoncpark/issue/38 Issue/38 | 31 January 2020, 19:49:30 UTC |
| 2cb3d31 | jiwoncpark | 31 January 2020, 19:48:04 UTC | Do not import both tensorflow and torch with init, in case both are not installed | 31 January 2020, 19:48:04 UTC |
| 48556ca | jiwoncpark | 31 January 2020, 19:46:41 UTC | Allow null PSF for DC2 verification | 31 January 2020, 19:46:41 UTC |
| a06222f | jiwoncpark | 31 January 2020, 19:45:48 UTC | Export the absolute time delays and corresponding image positions | 31 January 2020, 19:45:48 UTC |
| a74ef75 | Sebastian Wagner-Carena | 29 January 2020, 01:59:49 UTC | all approx distributions implemented and tested | 29 January 2020, 01:59:49 UTC |
| 39076bf | Sebastian Wagner-Carena | 29 January 2020, 00:43:58 UTC | fixed lognorm | 29 January 2020, 00:43:58 UTC |
| 2fb5429 | Sebastian Wagner-Carena | 29 January 2020, 00:42:31 UTC | pdf now returns 0 when out of bounds for generalized normal | 29 January 2020, 00:42:31 UTC |
| 636bd20 | jiwoncpark | 21 January 2020, 23:57:00 UTC | Add missing self argument | 21 January 2020, 23:57:00 UTC |
| cb0eff5 | jiwoncpark | 21 January 2020, 23:55:39 UTC | Allow BaobabConfig to return the noise_kwargs for input into noise model for online data augmentation | 21 January 2020, 23:55:39 UTC |
| db0ce12 | jiwoncpark | 21 January 2020, 23:46:18 UTC | Get image shape from tf.shape() rather than calling tensor's shape method | 21 January 2020, 23:46:18 UTC |
| e6bf6c1 | jiwoncpark | 21 January 2020, 23:44:31 UTC | Modularize some bigger functions and remove extraneous imports | 21 January 2020, 23:44:31 UTC |
| 339b332 | jiwoncpark | 21 January 2020, 23:27:19 UTC | Pad image position arrays with zeros at the end, with max size 4 | 21 January 2020, 23:27:19 UTC |
| d5ef0e5 | jiwoncpark | 16 January 2020, 00:21:06 UTC | Move velocity dispersion computation out of bnn prior object so it can be imported by h0rton during H0 inference | 16 January 2020, 00:21:06 UTC |
| f1e8ed6 | jiwoncpark | 20 December 2019, 00:53:05 UTC | Separate out lognormal sampler and pdf eval and add logpdf eval for all distributions, with corresponding updates to config files, tests passing | 20 December 2019, 00:53:05 UTC |
| 26cda9b | jiwoncpark | 20 December 2019, 00:52:08 UTC | Fix weird line breaks | 20 December 2019, 00:52:08 UTC |
| 3217c44 | jiwoncpark | 19 December 2019, 22:36:09 UTC | Add importable dictionary of all distributions with their (ordered) list of hyperparams | 19 December 2019, 22:36:09 UTC |
| 16c48fa | jiwoncpark | 18 December 2019, 00:37:06 UTC | Remove printing of metadata columns in the last line, as it's empty if checkpointing interval goes into n_data evenly | 18 December 2019, 00:37:06 UTC |
| 431e715 | jiwoncpark | 17 December 2019, 23:27:26 UTC | Move the TF noise test out for now | 17 December 2019, 23:27:26 UTC |
| d9317c0 | jiwoncpark | 17 December 2019, 23:13:27 UTC | Force CPU at test class init | 17 December 2019, 23:13:27 UTC |
| 9c66c15 | jiwoncpark | 17 December 2019, 23:09:01 UTC | Check disk space again | 17 December 2019, 23:09:01 UTC |
| e2b6e5f | jiwoncpark | 17 December 2019, 23:08:28 UTC | Restore python image | 17 December 2019, 23:08:28 UTC |
| 382b855 | jiwoncpark | 17 December 2019, 22:52:03 UTC | Run each test script manually | 17 December 2019, 22:52:03 UTC |
| e061e9e | jiwoncpark | 17 December 2019, 22:37:15 UTC | Remove unused imports and try running two specific tests | 17 December 2019, 22:37:15 UTC |
| 63088f9 | jiwoncpark | 17 December 2019, 22:27:12 UTC | Fix pyasnl version error | 17 December 2019, 22:27:12 UTC |
| a86cfb3 | jiwoncpark | 17 December 2019, 22:19:49 UTC | Pip install silently, without progress bars | 17 December 2019, 22:19:49 UTC |
| 283b340 | jiwoncpark | 17 December 2019, 22:12:32 UTC | Try importing each module used by tests | 17 December 2019, 22:12:32 UTC |
| 323c8b0 | jiwoncpark | 17 December 2019, 21:59:52 UTC | See which pip3 version is being used and where it is | 17 December 2019, 21:59:52 UTC |
| 9917a42 | jiwoncpark | 17 December 2019, 21:53:00 UTC | Remove pip3 freeze as it causes import errors | 17 December 2019, 21:53:00 UTC |
| f81b02f | jiwoncpark | 17 December 2019, 21:50:20 UTC | Update scipy, pandas, matplotlib, astropy before testing that causes segfault | 17 December 2019, 21:50:20 UTC |
| b186bc5 | jiwoncpark | 17 December 2019, 21:41:21 UTC | Update all pip packages in case they are causing the segfault, attempt 2 with sudo permission | 17 December 2019, 21:41:21 UTC |
| a3fa298 | jiwoncpark | 17 December 2019, 21:36:12 UTC | Update all pip packages in case they are causing the segfault | 17 December 2019, 21:36:12 UTC |
| 87b11a8 | jiwoncpark | 17 December 2019, 21:11:26 UTC | Have apt install hdf5 libraries rather than hdf5 itself | 17 December 2019, 21:11:26 UTC |
| 04065f9 | jiwoncpark | 17 December 2019, 21:07:44 UTC | Have apt install hdf5 rather than pip, as pip doesn't install development headers, attempt 2 | 17 December 2019, 21:07:44 UTC |
| 6da1d84 | jiwoncpark | 17 December 2019, 21:05:59 UTC | Have apt install hdf5 rather than pip, as pip doesn't install development headers | 17 December 2019, 21:05:59 UTC |
| 265300f | jiwoncpark | 17 December 2019, 03:20:11 UTC | Install libhdf5-serial-dev instead | 17 December 2019, 03:20:11 UTC |
| a4c91b1 | jiwoncpark | 17 December 2019, 03:17:06 UTC | Install libhdf5, though travis is using python3.5 somehow | 17 December 2019, 03:17:06 UTC |
