https://github.com/ctlab/phantasus
Revision 04f5c8897a8c3bd207ca9107a4cb92f65ec6cdd7 authored by petrovich on 04 September 2019, 04:18:36 UTC, committed by petrovich on 10 September 2019, 17:13:21 UTC
1 parent f3ef1d1
Tip revision: 04f5c8897a8c3bd207ca9107a4cb92f65ec6cdd7 authored by petrovich on 04 September 2019, 04:18:36 UTC
GEO: support for experiment type checking
GEO: support for experiment type checking
Tip revision: 04f5c88
NAMESPACE
# Generated by roxygen2: do not edit by hand
export(getES)
export(getGDS)
export(getGSE)
export(read.gct)
export(reparseCachedESs)
export(servePhantasus)
export(write.gct)
import(Biobase)
import(GEOquery)
import(Rook)
import(ccaPP)
import(ggplot2)
import(grid)
import(gtable)
import(htmltools)
import(httpuv)
import(jsonlite)
import(limma)
import(opencpu)
import(rhdf5)
import(stats)
import(svglite)
importFrom(AnnotationDbi,columns)
importFrom(AnnotationDbi,keys)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,mapIds)
importFrom(AnnotationDbi,species)
importFrom(fgsea,fgseaMultilevel)
importFrom(fgsea,plotEnrichment)
importFrom(ggplot2,ggtitle)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,svg)
importFrom(methods,new)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(utils,download.file)
importFrom(utils,getFromNamespace)
importFrom(utils,head)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,write.table)
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