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https://github.com/ctlab/phantasus
21 September 2022, 08:00:11 UTC
Revision 0a52aa20409b3c589f220cb1e1538fbc179b04f6 authored by Vladislav Kamenev on 12 February 2019, 16:35:07 UTC, committed by Vladislav Kamenev on 12 February 2019, 16:35:07 UTC 
Merge branch 'develop' of https://github.com/ctlab/phantasus into develop
2 parent s a667006 + ad54b61
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Tip revision: 0a52aa20409b3c589f220cb1e1538fbc179b04f6 authored by Vladislav Kamenev on 12 February 2019, 16:35:07 UTC
Merge branch 'develop' of https://github.com/ctlab/phantasus into develop
Tip revision: 0a52aa2
limmaAnalysis.Rd 
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/limmaAnalysis.R
\name{limmaAnalysis}
\alias{limmaAnalysis}
\title{Differential Expression analysis.}
\usage{
limmaAnalysis(es, fieldValues)
}
\arguments{
\item{es}{ExpressionSet object. It should be normalized for
more accurate analysis.}

\item{fieldValues}{Vector of comparison values, mapping
categories' names to columns/samples}
}
\value{
Name of the file containing serialized de-matrix.
}
\description{
\code{limmaAnalysis} performs differential expression analysis
    from limma package and returns a ProtoBuf-serialized resulting
    de-matrix.
}
\examples{
\dontrun{
data(es)
limmaAnalysis(es, fieldValues = c("A", "A", "A", "B", "B"))
}
}
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