https://github.com/ctlab/phantasus
Revision 0e730f3f21af2bcb94d162755fa71c6acb15babe authored by Vladislav Kamenev on 19 July 2019, 13:00:20 UTC, committed by GitHub on 19 July 2019, 13:00:20 UTC
New gpl loader. Example dataset
Tip revision: 0e730f3f21af2bcb94d162755fa71c6acb15babe authored by Vladislav Kamenev on 19 July 2019, 13:00:20 UTC
Merge pull request #133 from ctlab/develop
Merge pull request #133 from ctlab/develop
Tip revision: 0e730f3
NAMESPACE
# Generated by roxygen2: do not edit by hand
export(getES)
export(getGDS)
export(getGSE)
export(read.gct)
export(reparseCachedESs)
export(servePhantasus)
export(write.gct)
import(Biobase)
import(GEOquery)
import(Rook)
import(ccaPP)
import(ggplot2)
import(grid)
import(gtable)
import(htmltools)
import(httpuv)
import(jsonlite)
import(limma)
import(opencpu)
import(rhdf5)
import(stats)
import(svglite)
importFrom(AnnotationDbi,columns)
importFrom(AnnotationDbi,keys)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,mapIds)
importFrom(AnnotationDbi,species)
importFrom(fgsea,fgseaMultilevel)
importFrom(fgsea,plotEnrichment)
importFrom(ggplot2,ggtitle)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,svg)
importFrom(methods,new)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(utils,download.file)
importFrom(utils,getFromNamespace)
importFrom(utils,head)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,write.table)
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