https://github.com/GPflow/GPflow
Revision 1851e0d03aeb50009765fbc73ddb281dc12f70c9 authored by st-- on 27 June 2018, 11:19:26 UTC, committed by Mark van der Wilk on 27 June 2018, 11:19:26 UTC
* add @markvdw's stochastic likelihood, including the softmax * initial MC likelihood * remove MonteCarloLikelihood base class from tests * fix test * var of predict_mean_and_var and predict_density for MC likelihood * factor out MC sampling * add comment for variance bias * add tests * fixes * use same integration as for GH quadrature in MonteCarloLikelihood.predict_mean_and_var() * . * increase rtol * move to proper use of super() * move MC integration to quadrature module, similar to ndiagquad * seed to make test deterministic * add Assert for shape of Y * tidy up studentT likelihood * fix for heteroskedastic likelihoods -- requires logp to always call the Y argument Y * fix doc * add assert and equivalence tests for SoftMax * remove erroneously added file * rename "probit" to inv_probit (which is what it actually is) * add assert for num_classes to SoftMax * fix whitespace * Update RELEASE.md * Update RELEASE.md
1 parent 1b0f4b0
Tip revision: 1851e0d03aeb50009765fbc73ddb281dc12f70c9 authored by st-- on 27 June 2018, 11:19:26 UTC
Monte-Carlo likelihoods (#799)
Monte-Carlo likelihoods (#799)
Tip revision: 1851e0d
run_tests.sh
#!/bin/bash
# Script for running GPflow tests in sequential and parallel modes.
# Running tensorflow based tests in distinct processes prevents
# bad memory accumulations which can lead to crashes or slow runs
# on resource limited hardware.
# Written by Artem Artemev, 06/08/2017
set -e
mode=${1:-"--sequential"}
case "$mode" in
-p|--parallel)
numproc=$([[ $(uname) == 'Darwin' ]] && sysctl -n hw.physicalcpu_max || nproc)
echo ">>> Parallel mode. Number of processes = $numproc"
echo testing/test_*.py | xargs -n 1 -P "$numproc" bash -c 'nosetests -v --nologcapture $0 || exit 255'
;;
-s|--sequential)
for test_file in testing/test_*.py; do
echo ">>> Run $test_file"
nosetests -v --nologcapture "$test_file"
rc=$?
if [ "$rc" != "0" ]; then
echo ">>> $test_file failed"
exit $rc
fi
done
;;
*)
;;
esac
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