https://github.com/GPflow/GPflow
Revision 24b5733d161bed633dd5c00c4de3faf4d4ee0322 authored by Eric Hammy on 13 November 2019, 12:27:36 UTC, committed by Artem Artemev on 13 November 2019, 12:27:36 UTC
Migrate MCMC notebook to gpflow 2 using tensorflow probabilities.
Changes required a few changes across the rest of the codebase, outside of the notebook.

* small change to leaf printing function (fix bug, which was preventing printing of composite kernels)
* parameters and trainable_parameters now return tuples, not generators, like tf implementation of variables, trainable_variables
* tfp.distributions now work with different dtypes (by wrapping of parameters), so now play nicely with gpflow.
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Tip revision: 24b5733d161bed633dd5c00c4de3faf4d4ee0322 authored by Eric Hammy on 13 November 2019, 12:27:36 UTC
Migrate MCMC notebook to gpflow2.0 (#1100)
Tip revision: 24b5733
GLOSSARY.md
## Glossary

GPflow does not always follow standard Python naming conventions,
and instead tries to apply the notation in the relevant GP papers.\
The following is the convention we aim to use in the code.

---

<dl>
  <dt>GPR</dt>
  <dd>Gaussian process regression</dd>

  <dt>SVGP</dt>
  <dd>stochastic variational inference for Gaussian process models</dd>

  <dt>Shape constructions [..., A, B]</dt>
  <dd>the way of describing tensor shapes in docstrings and comments. Example: <i>[..., N, D, D]</i>, this is a tensor with an arbitrary number of leading dimensions indicated using the ellipsis sign, and the last two dimensions are equal</dd>

  <dt>X</dt>
  <dd>(and variations like Xnew) refers to input points; always of rank 2, e.g. shape <i>[N, D]</i>, even when <i>D=1</i></dd>

  <dt>Y</dt>
  <dd>(and variations like Ynew) refers to observed output values, potentially with multiple output dimensions; always of rank 2, e.g. shape <i>[N, P]</i>, even when <i>P=1</i></dd>

  <dt>Z</dt>
  <dd>refers to inducing points</dd>

  <dt>M</dt>
  <dd>stands for the number of inducing features (e.g. length of Z)</dd>

  <dt>N</dt>
  <dd>stands for the number of data or minibatch size in docstrings and shape constructions</dd>

  <dt>P</dt>
  <dd>stands for the number of output dimensions in docstrings and shape constructions</dd>

  <dt>D</dt>
  <dd>stands for the number of input dimensions in docstrings and shape constructions</dd>
</dl>
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