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https://github.com/bcgsc/ntCard
12 May 2023, 11:59:15 UTC
Revision 24d35c060840ab7389f3311c5bfd4a6a0a7c4b4c authored by Johnathan Wong on 23 January 2020, 17:22:40 UTC, committed by GitHub on 23 January 2020, 17:22:40 UTC 
use ntHash 2.1.0 (#36)
 
* The files in ntHash come from:
https://github.com/bcgsc/ntHash
Release 2.1.0
Downloaded using https://github.com/bcgsc/ntHash/archive/2.1.0.zip

* ntcard.cpp: use new ntHashIterator

* set up make distcheck CI

* azure: run make distcheck

* add Makefile needed for make distcheck

* Makefile.am: clean up downloaded files

* Makefile.am: add rm to code

* Makefile.am: use tabs

* Common: remove nthash.hpp

* Makefile.am: remove Common/nthash.hpp

* Common: remove ntHashIterator.hpp

* nthll.cpp: use vendored ntHashIterator.hpp

* Makefile.am: revert to previous ordering

* vendor/Makefile.am: add nthash.hpp
1 parent 8eb710f
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Tip revision: 24d35c060840ab7389f3311c5bfd4a6a0a7c4b4c authored by Johnathan Wong on 23 January 2020, 17:22:40 UTC
use ntHash 2.1.0 (#36)
Tip revision: 24d35c0
CITATION.bib 
@article{doi:10.1093/bioinformatics/btw832,
author = {Mohamadi, Hamid and Khan, Hamza and Birol, Inanc},
title = {ntCard: a streaming algorithm for cardinality estimation in genomics data},
journal = {Bioinformatics},
volume = {33},
number = {9},
pages = {1324},
year = {2017},
doi = {10.1093/bioinformatics/btw832},
URL = { + http://dx.doi.org/10.1093/bioinformatics/btw832},
eprint = {/oup/backfile/content_public/journal/bioinformatics/33/9/10.1093_bioinformatics_btw832/2/btw832.pdf}
}
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