https://github.com/ctlab/quant3p
25 December 2019, 16:37:49 UTC
Revision 25ee0e82b87e8be39bd2e58f64118494cc812d93 authored by Alexey Sergushichev on 27 November 2014, 09:44:32 UTC, committed by Alexey Sergushichev on 27 November 2014, 09:44:32 UTC 
Added script to do the whole analysis in one piece
1 parent 3761faf
Raw File
Tip revision: 25ee0e82b87e8be39bd2e58f64118494cc812d93 authored by Alexey Sergushichev on 27 November 2014, 09:44:32 UTC
Added script to do the whole analysis in one piece
Tip revision: 25ee0e8
setup.py
from setuptools import setup

setup(name='quant3p',
      version='0.1',
      description='Tools to do 3\' RNA-seq quantification',
      url='http://github.com/ctlab/quant3p',
      author='Alexey Sergushichev',
      author_email='alserg@rain.ifmo.ru',
      license='Apache2',
      packages=['quant3p'],
      install_requires=[
          'HTSeq',
          'macs2 >= 2.1.0'
          ],
      scripts=['bin/macs2-stranded', 'bin/quant3p'],
      entry_points = {
          'console_scripts': [
              'fix-mm=quant3p.fixmm:main',
              'gtf-extend=quant3p.gtfextend:main'],
          },
      zip_safe=False)
back to top