https://github.com/ctlab/phantasus
Revision 282cc9d8b488f1cca3e5e08899001f7540b16f38 authored by Vladislav Kamenev on 26 June 2019, 13:43:30 UTC, committed by Vladislav Kamenev on 26 June 2019, 13:43:30 UTC
1 parent b9961f7
Tip revision: 282cc9d8b488f1cca3e5e08899001f7540b16f38 authored by Vladislav Kamenev on 26 June 2019, 13:43:30 UTC
Phantasus tutorial final draft
Phantasus tutorial final draft
Tip revision: 282cc9d
NAMESPACE
# Generated by roxygen2: do not edit by hand
export(getES)
export(getGDS)
export(getGSE)
export(read.gct)
export(reparseCachedESs)
export(servePhantasus)
export(write.gct)
import(Biobase)
import(GEOquery)
import(Rook)
import(ccaPP)
import(ggplot2)
import(grid)
import(gtable)
import(htmltools)
import(httpuv)
import(jsonlite)
import(limma)
import(opencpu)
import(rhdf5)
import(stats)
import(svglite)
importFrom(AnnotationDbi,columns)
importFrom(AnnotationDbi,keys)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,mapIds)
importFrom(AnnotationDbi,species)
importFrom(fgsea,fgseaMultilevel)
importFrom(fgsea,plotEnrichment)
importFrom(ggplot2,ggtitle)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,svg)
importFrom(methods,new)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(utils,download.file)
importFrom(utils,getFromNamespace)
importFrom(utils,head)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,write.table)
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