https://github.com/cran/RandomFields
Revision 513ad2c4d40f9e25102134188eb154b18140f6a2 authored by Martin Schlather on 16 April 2017, 09:57:35 UTC, committed by cran-robot on 16 April 2017, 09:57:35 UTC
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Tip revision: 513ad2c4d40f9e25102134188eb154b18140f6a2 authored by Martin Schlather on 16 April 2017, 09:57:35 UTC
version 3.1.48
Tip revision: 513ad2c
RMmodels-Methods-plots.R

## Authors 
## Martin Schlather, schlather@math.uni-mannheim.de
##
##
## Copyright (C) 2015 -- 2017 Alexander Malinowski & Martin Schlather
## Copyright (C) 2017 -- 2017 Martin Schlather
##
## This program is free software; you can redistribute it and/or
## modify it under the terms of the GNU General Public License
## as published by the Free Software Foundation; either version 3
## of the License, or (at your option) any later version.
##
## This program is distributed in the hope that it will be useful,
## but WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
## GNU General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with this program; if not, write to the Free Software
## Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.  


## accessing 'RMmodel' and RMmodelgenerator via '['-operator
# e.g. RMwhittle["domain"]

accessSlotsByName <- function(x,i,j,drop=FALSE) {
  names <- slotNames(x)
  if (!(i %in% names))
    stop(paste(i, "is not a valid slot specification"))
  return(slot(x, i))
}

accessReplaceSlotsByName <- function(x,i,j,value) {
  names <- slotNames(x)
  if (!(i %in% names))
    stop(paste(i, "is not a valid slot specification"))
  else
    slot(x, i) <- value
  validObject(x)
  return(x)
}

setMethod(f="[", signature = 'RMmodel', def = accessSlotsByName)
setMethod(f="[", signature = 'RMmodelFit', def = accessSlotsByName)
setMethod(f="[", signature = 'RMmodelgenerator', def = accessSlotsByName)

setReplaceMethod(f="[", signature = 'RMmodel', accessReplaceSlotsByName)
setReplaceMethod(f="[", signature = 'RMmodelFit', accessReplaceSlotsByName)
setReplaceMethod(f="[", signature = 'RMmodelgenerator',accessReplaceSlotsByName)


## summing up RMmodels
setMethod('c', signature=c('RMmodel'),
          function(x, ..., recursive = FALSE)  R.c(x, ...)
          )

resolve <- function(e1, e2, sign) {
  d <- list()
  if (e1@name==sign){
    len.e1 <- length(e1@submodels)              
    for (i in 1:len.e1)  d[[i]] <- e1@submodels[[i]]
  } else {
    len.e1 <- 1
    d[[1]] <- e1
  }
  d[[len.e1 + 1]] <- e2            
  if (sign == ZF_MULT[1]) {
#    print(d)
    model <- do.call(sign, d)
  } else model <- do.call(sign, d)
  return(model)
}

resolveRight<- function(e1, e2, sign) {
  d <- list()
  if (e1@name==sign){
    len.e1 <- length(e1@submodels)              
    for (i in 1:len.e1)  d[[i]] <- e1@submodels[[i]]
  } else {
    len.e1 <- 1
    d[[1]] <- e1
  }
  if (length(e2)==1) d[[len.e1 + 1]] <- do.call(ZF_SYMBOLS_CONST, list(e2))
  else {
    e <- list(e2)
    e[[COVARIATE_ADDNA_NAME]] <- TRUE
    d[[len.e1 + 1]] <- do.call(ZF_COVARIATE, e)
  }
  model <- do.call(sign, d)
  return(model)
}

resolveLeft<- function(e1, e2, sign) {
  d <- list()
  len.e1 <- 1
  if (length(e1)==1)  d[[1]] <- do.call(ZF_SYMBOLS_CONST, list(e1))
  else {
    e <- list(e1)
    e[[COVARIATE_ADDNA_NAME]] <- TRUE   
    d[[1]] <- do.call(ZF_COVARIATE, e)
  }
  
  d[[len.e1 + 1]] <-  e2  
  model <- do.call(sign, d)
  return(model)
}

## summing up RMmodels
setMethod('+', signature=c('RMmodel', 'RMmodel'),
          function(e1, e2) resolve(e1, e2, ZF_PLUS[1]))
setMethod('+', signature=c('RMmodel', 'numeric'), 
          function(e1, e2) resolveRight(e1, e2, ZF_PLUS[1]))
setMethod('+', signature=c('RMmodel', 'logical'),
          function(e1, e2) resolveRight(e1, e2, ZF_PLUS[1]))
setMethod('+', signature=c('numeric', 'RMmodel'),
          function(e1, e2) resolveLeft(e1, e2, ZF_PLUS[1]))
setMethod('+', signature=c('logical', 'RMmodel'),
          function(e1, e2) resolveLeft(e1, e2, ZF_PLUS[1]))



## multiplying RMmodels
setMethod('*', signature=c('RMmodel', 'RMmodel'),
         function(e1, e2) resolve(e1, e2, ZF_MULT[1]))
setMethod('*', signature=c('numeric', 'RMmodel'),
         function(e1, e2) resolveLeft(e1, e2, ZF_MULT[1]))
setMethod('*', signature=c('logical', 'RMmodel'),
         function(e1, e2) resolveLeft(e1, e2, ZF_MULT[1]))
setMethod('*', signature=c('RMmodel', 'logical'),
          function(e1, e2) resolveRight(e1, e2, ZF_MULT[1]))
setMethod('*', signature=c('RMmodel', 'numeric'),
          function(e1, e2) resolveRight(e1, e2, ZF_MULT[1]))


Xresolve <- function(e1, e2, model) {
  d <- list()
  len.e1 <- 1
  d[[1]] <- e1
  d[[len.e1 + 1]] <- e2            
  model <- do.call(model, d)
  return(model)
}
XresolveLeft <- function(e1, e2, model) {
  d <- list()
  len.e1 <- 1
  if (length(e1)==1) d[[1]] <- do.call(ZF_SYMBOLS_CONST, list(e1))
  else {
    e <- list(e1)
    e[[COVARIATE_ADDNA_NAME]] <- TRUE   
    d[[1]] <-  do.call(ZF_COVARIATE, e)
  }
  d[[len.e1 + 1]] <- e2            
  model <- do.call(model, d)
  return(model)
}
XresolveRight <- function(e1, e2, model) {
  d <- list()
  len.e1 <- 1
  d[[1]] <- e1
  if (length(e2)==1) d[[len.e1 + 1]] <- do.call(ZF_SYMBOLS_CONST, list(e2))
  else {
    e <- list(e2)
    e[[COVARIATE_ADDNA_NAME]] <- TRUE   
    d[[len.e1 + 1]] <- do.call(ZF_COVARIATE, e)
  }
  model <- do.call(model, d)
  return(model)
}
  

## substracting RMmodels
setMethod('-', signature=c('RMmodel', 'RMmodel'),
          function(e1, e2) Xresolve(e1, e2, "R.minus"))
setMethod('-', signature=c('numeric', 'RMmodel'),
          function(e1, e2) XresolveLeft(e1, e2, "R.minus"))
setMethod('-', signature=c('logical', 'RMmodel'),
          function(e1, e2) XresolveLeft(e1, e2, "R.minus"))
setMethod('-', signature=c('RMmodel', 'numeric'),
          function(e1, e2) XresolveRight(e1, e2, "R.minus") )
setMethod('-', signature=c('RMmodel', 'logical'),
          function(e1, e2) XresolveRight(e1, e2, "R.minus") )



## dividing up RMmodels
setMethod('/', signature=c('RMmodel', 'RMmodel'),
          function(e1, e2) Xresolve(e1, e2, "R.div"))
setMethod('/', signature=c('numeric', 'RMmodel'),
          function(e1, e2) XresolveLeft(e1, e2, "R.div"))
setMethod('/', signature=c('logical', 'RMmodel'),
          function(e1, e2) XresolveLeft(e1, e2, "R.div"))
setMethod('/', signature=c('RMmodel', 'numeric'),
          function(e1, e2) XresolveRight(e1, e2, "R.div") )
setMethod('/', signature=c('RMmodel', 'logical'),
          function(e1, e2) XresolveRight(e1, e2, "R.div") )



## powering up RMmodels
setMethod('^', signature=c('RMmodel', 'RMmodel'),
          function(e1, e2) Xresolve(e1, e2, "R.pow")) 
setMethod('^', signature=c('numeric', 'RMmodel'),
          function(e1, e2) XresolveLeft(e1, e2, "R.pow"))
setMethod('^', signature=c('logical', 'RMmodel'),
          function(e1, e2) XresolveLeft(e1, e2, "R.pow"))
setMethod('^', signature=c('RMmodel', 'numeric'),
          function(e1, e2) XresolveRight(e1, e2, "R.pow") )
setMethod('^', signature=c('RMmodel', 'logical'),
          function(e1, e2) XresolveRight(e1, e2, "R.pow") )




## str, print and show

## str.RMmodel is basically copied from str.default, but where
## those slots of 'par.general' are excluded from being printed
## for which the value is 'RFdefault', i.e. for which there is no
## explicit value given
str.RMmodel <-
  function(object, max.level = NA, vec.len = strO$vec.len,
           digits.d = strO$digits.d,
           nchar.max = 128, give.attr = TRUE, give.head = TRUE,
           give.length = give.head, 
           width = getOption("width"), nest.lev = 0,
           indent.str = paste(rep.int(" ", 
             max(0, nest.lev + 1)), collapse = ".."),
           comp.str = "$ ", no.list = FALSE, envir = baseenv(),
           strict.width = strO$strict.width, 
           formatNum = strO$formatNum, list.len = 99, ...) 
{
  oDefs <- c("vec.len", "digits.d", "strict.width", "formatNum")
  strO <- getOption("str")
  if (!is.list(strO)) {
    warning("invalid options('str') -- using defaults instead")
    strO <- strOptions()
  }
  else {
    if (!all(names(strO) %in% oDefs)) 
      warning("invalid components in options('str'): ", 
              paste(setdiff(names(strO), oDefs), collapse = ", "))
    strO <- modifyList(strOptions(), strO)
  }
  strict.width <- match.arg(strict.width, choices = c("no", "cut", "wrap"))
  if (strict.width != "no") {
    ss <- capture.output(str(object, max.level = max.level, #
                             vec.len = vec.len, digits.d = digits.d,
                             nchar.max = nchar.max, 
                             give.attr = give.attr,
                             give.head = give.head,
                             give.length = give.length, 
                             width = width, nest.lev = nest.lev,
                             indent.str = indent.str, 
                             comp.str = comp.str,
                             no.list = no.list || is.data.frame(object),
                             envir = envir, strict.width = "no", ...))
    if (strict.width == "wrap") {
      nind <- nchar(indent.str) + 2
      ss <- strwrap(ss, width = width, exdent = nind)
    }
    if (any(iLong <- nchar(ss) > width)) 
      ss[iLong] <- sub(sprintf("^(.{1,%d}).*", width - 2), "\\1..", ss[iLong])
    cat(ss, sep = "\n")
    return(invisible())
  }
  oo <- options(digits = digits.d)
  on.exit(options(oo))
  le <- length(object)
  P0 <- function(...) paste(..., sep = "")
  `%w/o%` <- function(x, y) x[is.na(match(x, y))]
  nfS <- names(fStr <- formals())
  strSub <- function(obj, ...) {
    nf <- nfS %w/o% c("object", "give.length", "comp.str", 
                      "no.list", names(match.call())[-(1:2)], "...")
    aList <- as.list(fStr)[nf]
    aList[] <- lapply(nf, function(n) eval(as.name(n)))
    if ("par.general" %in% names(obj)){
      is.RFdefault <-
        unlist(lapply(obj$par.general,
                      FUN=function(x){
                        !is(x, ZF_MODEL) && !is.na(x) && x==ZF_DEFAULT_STRING
                      }))
      obj$par.general[is.RFdefault] <- NULL
      if (all(is.RFdefault)) obj$par.general <- list()
    }
    do.call(utils::str, c(list(object = obj), aList, list(...)), 
            quote = TRUE)
  }
  v.len <- vec.len
  std.attr <- "names"
  cl <- if ((S4 <- isS4(object))) 
    class(object)
  else oldClass(object)
  has.class <- S4 || !is.null(cl)
    mod <- ""
  char.like <- FALSE
  if (give.attr) 
    a <- attributes(object)
  if (is.null(object)) 
    cat(" NULL\n")
  else if (S4) {
    a <- sapply(methods::.slotNames(object), methods::slot, 
                object = object, simplify = FALSE)
    cat("Formal class", " '", paste(cl, collapse = "', '"), 
        "' [package \"", attr(cl, "package"), "\"] with ", 
        length(a), " slots\n", sep = "")
    strSub(a, comp.str = "@ ", no.list = TRUE,
           give.length = give.length, 
           indent.str = paste(indent.str, ".."),
           nest.lev = nest.lev + 1)
    return(invisible())
  }
}

summary.RMmodel <- function(object, max.level=5, ...)
  summary(PrepareModel2(object, ...), max.level=max.level)

summary.RM_model <- function(object, ...) {
  class(object) <- "summary.RMmodel"
  object
}

print.summary.RMmodel <- function(x, max.level=5, ...) {
  str(x, no.list=TRUE, max.level = max.level, give.attr=FALSE) #
  invisible(x)
}

print.RM_model <- function(x, max.level=5,...) {
  print.summary.RMmodel(summary.RM_model(x, max.level=max.level,...),
                        max.level=max.level)#
}
print.RMmodel <- function(x, max.level=5,...) {
  print.summary.RMmodel(summary.RMmodel(x, max.level=max.level, ...),
                        max.level=max.level)#
}


setMethod(f="show", signature='RMmodel',
          definition=function(object) print.RMmodel(object))#




print.RMmodelgenerator <- function(x, ...) {
  cat("*** object of Class '", ZF_MODEL_FACTORY,
      "' ***\n  ** str(object):\n  ", sep="") #
  str(x, give.attr=FALSE)#
  cat("*** end of '", ZF_MODEL_FACTORY, "' ***\n", sep="")#
}



rfConvertRMmodel2string <- function(model){
  if (!is(model, class2=ZF_MODEL))
    stop("model must be of class 'RMmodel'")
  par <- c(model@par.model, model@par.general)
  idx.random <- unlist(lapply(par, FUN=isModel))
  if (is.null(idx.random)){
    param.string <- ""
    param.random.string <- ""
  } else {
    idx.default <- par[!idx.random] == ZF_DEFAULT_STRING
    param.string <- paste(names(par[!idx.random][!idx.default]),
                          par[!idx.random][!idx.default],
                          sep="=", collapse=", ")

    #if (sum(idx.random) > 0){
    string.vector <- lapply(par[idx.random], FUN=rfConvertRMmodel2string)
    param.random.string <- paste(names(par[idx.random]), string.vector,
                                 sep="=", collapse=", ")
  }
  
  if (length(model@submodels) > 0){
    string.vector <- lapply(model@submodels, FUN=rfConvertRMmodel2string)
    submodel.string <- paste(names(model@submodels), string.vector,
                             sep="=", collapse=", ")
    if (!(nchar(param.string)==0))
      submodel.string <- paste(submodel.string, ", ", sep="")
  }
  else submodel.string <- ""
  
  string <- paste(model@name, "(", submodel.string, param.random.string,
                  param.string, ")", sep="")
  return(string)
}


## Plot

preparePlotRMmodel <- function(x, xlim, ylim, n.points, dim, fct.type,
                               MARGIN, fixed.MARGIN){
  types <- c("Cov", "Variogram", "Fctn")
  verballist <- paste("'", types, "'", sep="", collapse="")
  if (!missing(fct.type) && length(fct.type) > 0) {
    if (!(fct.type %in% types))
      stop("fct.type must be NULL or of the types ", verballist)
    types <- fct.type
  }

  all.fct.types <- character(length(x))
  all.vdim <- numeric(length(x))
  for (i in 1:length(x)) {
    fct.type <- types
    m <- list("", PrepareModel2(x[[i]]))
    while (length(fct.type) > 0 &&
           { m[[1]] <- fct.type[1];
             !is.numeric(vdim <- try( InitModel(MODEL_USER, m, dim),
                                     silent=TRUE))})
      fct.type <- fct.type[-1]
    if (!is.numeric(vdim)) {
      ##    Print(vdim, model)
      ##   stop("'vdim' is not numeric")
      stop(attr(vdim, "condition")$message)
    }
    if (vdim[1] != vdim[2]) stop("only simple models can be plotted")
    all.vdim[i] <- vdim[1]
    all.fct.types[i] <- fct.type[1]
  }

  if (!all(all.vdim == all.vdim[1]))
    stop("models have different multivariability")
  

#  fctcall.vec <- c("Cov", "Variogram")
  #covinfo <- RFgetModelInfo(register=MODEL_USER, level=3, spConform=TRUE)
  ### Print((covinfo))
#  Print(covinfo$domown, TRANS_INV , covinfo$type, isPosDef(covinfo$type),
 #       is.null(fct.type), fct.type,"Variogram") ; xxx

  if (is.null(xlim)) {
    xlim <- if (dim > 1 || all.vdim[1] > 1) c(-1, 1) * 1.75 else c(0, 1.75)    
  }
  if (is.null(ylim) && dim > 1) ylim <- xlim
 
  
  distance <- seq(xlim[1], xlim[2], length=n.points)
  
  if (prod(xlim) <= 0)
    distance <- sort(c(if (!any(distance==0)) 0, 1e-5, distance))

  if (dim > 1) {
    distanceY <- seq(ylim[1], ylim[2], length=n.points)
    if (prod(ylim) < 0 & !(any(distanceY==0)))
      distanceY <- sort(c(0, distanceY))
  }

#  Print(covinfo)

#  if(covinfo$domown != TRANS_INV)
#    stop("method only implemented for models that are not kernels")

 
  if (all(all.fct.types[1] == all.fct.types)) {
    switch(all.fct.types[1],
         "Cov" = {
           main <-"Covariance function"
           ylab <- "C(distance)"
         },
         "Variogram" = {
           main <- "Variogram"
           ylab <- expression(gamma(distance))
         },
         "Fctn" = {
           main<- ""
           ylab <- "f(distance)"
         },
         stop("method only implemented for ", verballist)
       )
  } else {
    main <- ""
    ylab <- "f(distance)"
  }

  if (length(x) == 1) {
    for.what <- rfConvertRMmodel2string(x[[1]])
    if (nchar(for.what) > 20) for.what <- strsplit(for.what,"\\(")[[1]][1]
  } else {
    for.what <- "various models"
  }
   
 # main <- paste(main, " plot for ", for.what, "\n", sep="")
  main <- paste("plot for ", for.what, "\n", sep="")
  
  if (dim >= 3)
    main <- paste(sep="", main, ";  component", if (dim>3) "s", " ",
                  paste((1:dim)[-MARGIN], collapse=", "), 
                  " fixed to the value", if (dim>3) "s", " ",
                  paste(format(fixed.MARGIN, digits=4), collapse=", "))

  .C(C_DeleteKey, MODEL_USER)

  
  return(list(main=main, fctcall=all.fct.types, ylab=ylab, distance=distance,
              distanceY = if (dim > 1) distanceY, xlim=xlim, ylim=ylim))
}


singleplot <- function(cov, dim, li, plotmethod, dots, dotnames) {    
  if (dim==1) {
    D <- li$distance             
    iszero <- D == 0
    if (plotmethod == "matplot")  {
        plotpoint <- any(iszero) && diff(range(dots$ylim)) * 1e-3 <
          diff(range(cov)) - diff(range(cov[!iszero]))
        if (plotpoint) D[iszero] <- NA
    } else plotpoint <- FALSE
    liXY <-
      if (plotmethod=="plot.xy") list(xy = xy.coords(x=D, y=cov)) ## auch D ?
      else list(x=D, y=cov)
    
    ##       Print(plotmethod, args=c(dots, liXY))
    
    do.call(plotmethod, args=c(dots, liXY))   
    if (plotpoint) {
      for (i in 1:ncol(cov))
        points(0, cov[iszero, i], pch=19 + i, col = dots$col[i])
    }
    
  } else {
    if (!("zlim" %in% dotnames)) dots$zlim <- range(unlist(cov), finite=TRUE)
    addgiven <- "add" %in% dotnames
    local.dots <- dots
    local.dots$col <- NULL
    local.dots$lty <- NULL
    is.contour <- is.character(plotmethod) && plotmethod == "contour"
    if (!is.contour) {
      if (ncol(cov) > 1)
        stop("several models can be plotted at once only with 'contour'")
      col <- default.image.par(dots$zlim, NULL)$data$default.col
    }
    for (i in 1:ncol(cov)) {
      if (!addgiven && is.contour) local.dots$add <- i > 1
      do.call(plotmethod,
              args=c(list(x=li$distance, y=li$distanceY,
                  col=if (is.contour) dots$col[i] else col,
                  lty = dots$lty[i],
                  z=matrix(cov[, i], nrow=length(li$distance))), local.dots))
    }
  }
}


RFplotModel <- function(x, y, dim=1,
                        n.points=
                        if (dim==1 || is.contour) 200 else 100,
                        fct.type=NULL,
                        MARGIN, fixed.MARGIN,
                        maxchar=15, ...,
                        plotmethod=if (dim==1) "matplot" else "contour") {
  
  is.contour <- is.character(plotmethod) && plotmethod == "contour"
  RFopt <- RFoptions()
 
  if (ex.red <- RFopt$internal$examples_reduced)
    n.points <- as.integer(min(n.points, ex.red - 2))
  
  stopifnot(length(dim)==1)
  if (!(dim %in% 1:10))
    stop("only 'dim==1', 'dim==2' and 'dim==3' are allowed")
  if (dim==3)
    if (missing(MARGIN) || missing(fixed.MARGIN))
      stop("'MARGIN' and 'fixed.MARGIN' must be given if dim >=3")
  if ((!missing(MARGIN)) || (!missing(fixed.MARGIN))) {
    stopifnot((!missing(MARGIN)) && (!missing(fixed.MARGIN)))
    if (dim < 3)
      stop("'MARGIN' and 'fixed.MARGIN' should only be given for dim>=3")
    stopifnot(is.numeric(MARGIN) && length(MARGIN)==2)
    stopifnot(is.numeric(fixed.MARGIN) && (length(fixed.MARGIN) == dim - 2))
  }
  dots <- list(...)
  dotnames <- names(dots)
  models <- substr(dotnames, 1, 5) == "model"
  x <- c(list(x), dots[models])
  mnames <- c("", substr(dotnames[models], 6, 100))
  idx <- substr(mnames, 1, 1) == "."
  mnames[idx] <- substr(mnames[idx], 2, 1000)
  for (i in which(!idx)) {
    mnames[i] <- rfConvertRMmodel2string(x[[i]])
    nmn <- nchar(mnames[i]) - 1 
    if (substr(mnames[i], nmn, nmn) == "(") {
      mnames[i] <- substr(mnames[i], 1, nmn - 1)
    }
    msplit <- strsplit(mnames[i], "RM")[[1]]
    if (length(msplit) == 2 && msplit[1]=="")  mnames[i] <- msplit[2]
  }
  mnames <- substr(mnames, 1, maxchar)

  dots <- mergeWithGlobal(dots[!models])
  dotnames <- names(dots)  

  if (!("type" %in% dotnames)) dots$type <- "l"

#  print("vor Prepare")
  
  li <- preparePlotRMmodel(x=x, xlim=dots$xlim, ylim=dots$ylim,
                           n.points=n.points, dim=dim,
                           fct.type=fct.type,
                           MARGIN=MARGIN, fixed.MARGIN=fixed.MARGIN)

 # print("nach Prepare"); oooooo

  dots$xlim <- li$xlim
  if (!is.null(li$ylim)) dots$ylim <- li$ylim
  if (!("main" %in% dotnames)) dots$main <- li$main
  if (!("cex" %in% dotnames)) dots$cex <- 1
  if (!("cex.main" %in% dotnames)) dots$cex.main <- 1.3 * dots$cex
  if (!("cex.axis" %in% dotnames)) dots$cex.axis <- 1.0 * dots$cex
  if (!("cex.lab" %in% dotnames)) dots$cex.lab <- 1.0 * dots$cex
  if (!("col" %in% dotnames)) dots$col <- rep(1:7, length.out=length(x))

  cov <- list()
  if (dim==1) {
    for (i in 1:length(x)) 
      cov[[i]] <- rfeval(x=li$distance, model=x[[i]], fctcall=li$fctcall[i])

    #print(cov, li$distance)
    lab <- xylabs("distance", li$ylab)
    ## strokorb monotone ist z.B. nicht ueberall finite:
    if (!("ylim" %in% dotnames)) dots$ylim <- range(0, unlist(cov), finite=TRUE)
    if (!("xlab" %in% dotnames)) dots$xlab <- lab$x
    if (!("ylab" %in% dotnames)) dots$ylab <- lab$y
  } else {  
    lab <- xylabs("", "")    
    if (!("xlab" %in% dotnames)) dots$xlab <- lab$x
    if (!("ylab" %in% dotnames)) dots$ylab <- lab$y
    dots$type <- NULL
 
    if (dim==2) {
      di <- as.matrix(expand.grid(li$distance, li$distanceY))

       for (i in 1:length(x)) {
        cov[[i]] <- rfeval(x=di, model=x[[i]], fctcall=li$fctcall[i])      
     }
    } else if (dim>=3) {
      m1 <- expand.grid(li$distance, li$distanceY)
      m2 <- matrix(NA, ncol=dim, nrow=nrow(m1))
      m2[,MARGIN] <- as.matrix(m1)
      m2[,-MARGIN] <- rep(fixed.MARGIN, each=nrow(m1))
      for (i in 1:length(x))
        cov[[i]] <- rfeval(x=m2, model=x[[i]], fctcall=li$fctcall[i])
    } else stop("this error should never appear")
  }

  if ((is.null(dots$xlab) || dots$xlab=="") &&
      (is.null(dots$ylab) || dots$ylab=="")) {
    margins <- c(3, 3, if (dots$main=="") 0 else 2, 0) + 0.2
  } else {
    margins <- c(5, 5, if (dots$main=="") 0 else 2, 0) + 0.2
  }

  dimcov <-  dim(cov[[1]])
  graphics <- RFopt$graphics  
  if (plotmethod != "plot.xy") { ### points and lines !!
     if (is.null(dimcov)) { ## i.e. vdim == 1
      ArrangeDevice(graphics, c(1,1))
    } else {
      figs <- dimcov[2:3]
      ArrangeDevice(graphics, figs)
    }
  }
    
  
  scr <- NULL
  if (is.null(dimcov)) { ## i.e. vdim == 1
    cov <- sapply(cov, function(x) x)
    if (!("lty" %in% dotnames)) dots$lty <- 1:5
    singleplot(cov=cov, dim=dim, li=li, plotmethod, dots=dots,
               dotnames=dotnames)
 #   Print(mnames, dots$col, dots$lty)
    
    if (length(x) > 1) legend(x="topright", legend=mnames,
                             col=dots$col, lty=dots$lty)
  } else { ## multivariate 
    scr <- matrix(split.screen(figs=figs), ncol=dimcov[2], byrow=TRUE)
    par(oma=margins)
    title(main=dots$main, xlab=dots$xlab, ylab=dots$ylab,
          outer=TRUE, cex.main=dots$cex.main)
    dots.axis = dots[names(dots) != "type"]
    dots.axis$col = dots.axis$col.axis
    if (!("axes" %in% dotnames)) dots$axes <- FALSE
    
    for (i in 1:ncol(scr)) {
      for (j in 1:nrow(scr)) {
        dots$main <-
          eval(parse(text=paste("expression(C[", i, j,"])", sep="")))
        screen(scr[i,j])
        par(mar=c(0,0,2,1))

        singleplot(cov = sapply(cov, function(x) x[, i,j]),
                   dim = dim, li=li, plotmethod=plotmethod, dots=dots,
                   dotnames = dotnames)

        box()
        if (i==1) do.call(graphics::axis,
              args=c(dots.axis, list(side=1, outer = TRUE, line=1)))
        if (j==1) do.call(graphics::axis,
              args=c(dots.axis, list(side=2, outer = TRUE, line=1)))
      }
    }
  }

  if (graphics$split_screen && graphics$close_screen) {
    close.screen(scr)
    scr <- NULL
  }

  return(scr)
}


points.RMmodel <- function(x, ..., type="p")  
  RFplotModel(x, ...,type=type,  plotmethod="plot.xy")
lines.RMmodel <- function(x, ..., type="l")
  RFplotModel(x, ...,type=type,  plotmethod="plot.xy")



# @FUNCTION-STARP**********************************************************
# @NAME		list2RMmodel
# @REQUIRE	a list
# @AUTHOR	A Malinowski <malinows@math.uni-goettingen.de>
# @DATE		26.09.2011
# @FUNCTION-END************************************************************


list2RMmodel <- function(x, skip.prefix.check=FALSE) { 
  if (!is.list(x))
    return(x)

  name <- x[[1]]
  if (!is.character(name))
    return(x)
  
  len <- length(x)
  
  if (name %in% DOLLAR)
    return(list2RMmodel(c(x[[len]], x[-c(1, len)])))

  if (name == ZF_DISTR[1]){
    x <- x[-1]
    m <- do.call(ZF_DISTR[1], args=list())
    m@par.model <- x
    return(m)
  }
  
  if (name==ZF_SYMBOLS_PLUS) name <- ZF_PLUS[1] else
  if (name==ZF_SYMBOLS_MULT) name <- ZF_MULT[1] else
  if (name %in% ZF_MIXED) name <- ZF_INTERNALMIXED

  ## add prefix 'RM' if necessary
  if (!skip.prefix.check){
    if (!(name %in% list2RMmodel_Names)) {
      name2 <- paste(ZF_MODEL_PREFIX, name, sep="")
      # Print( name2,      list2RMmodel_Names, name2 %in% list2RMmodel_Names)
      if (!(name2 %in% list2RMmodel_Names))
        stop(paste("'", name, "' is not the name of a valid cov model", sep=""))
      else
        name <- name2
    }
  }

  
  if (len==1)
    return(eval(parse(text=paste(name, "()", sep=""))))
  else {
    x <- lapply(x, FUN=list2RMmodel, skip.prefix.check=skip.prefix.check)
    #argnames <- names(x[-1])
    if (length(idx <- which("anisoT" == names(x))) == 1){
      #argnames[idx] <- "Aniso"
      names(x)[idx] <- "Aniso"
      x[[idx]] <- t(x[[idx]])
    }
    #if (!is.null(argnames)) {
    #  isEmpty <- argnames=="" 
    #  argnames[!isEmpty] <- paste(argnames[!isEmpty], "=")
    #}
    return(do.call(name, args=x[-1]))
    
    #return(eval(parse(text =
    #                  paste(name, "(",
    #                        paste(argnames, " x[[", 2:len, "]]", 
    #                              collapse=","),
    #                        ")", sep=""))))
  }
}

setMethod(f="plot", signature(x='RMmodel', y="missing"),
          function(x, y, ...) RFplotModel(x, ...))
setMethod(f="lines", signature(x='RMmodel'),
          function(x, ..., type="l")
          RFplotModel(x, ..., type=type, plotmethod="plot.xy"))
setMethod(f="points", signature(x='RMmodel'),
          function(x, ..., type="p")
          RFplotModel(x, ..., type=type, plotmethod="plot.xy"))
setMethod(f="persp", signature(x='RMmodel'),
          function(x, ..., dim=2, zlab="")
          RFplotModel(x,...,dim=dim,zlab=zlab,plotmethod="persp"))
setMethod(f="image", signature(x='RMmodel'),
          function(x, ..., dim=2) RFplotModel(x,...,dim=dim,plotmethod="image"))
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