bd547ca6d79370a8ea3c77b876319d90 *DESCRIPTION
2ac8698b8109b3fa4e41d7336d15ffff *NAMESPACE
4d120d4e043d27196e4def717d0a9167 *R/attractorsToLaTeX.R
0e037f01fa88a832cb43d3a9d5e9f5dd *R/binarizeTimeSeries.R
ec2c323ef07745ec7b89339aa5a4433c *R/chooseNetwork.R
7c81eb3530ee3fede7742d9729de77c1 *R/edgeDetector.R
e594b6504400d8964120dd64acd3d54d *R/fixGenes.R
b96b8b67effb0c2d55a29cc6f19323bd *R/generateRandomNKNetwork.R
9597332899ac07b3145917fafc789d15 *R/generateRandomStartStates.R
2c872695c4fa33c90c6de2431f19e689 *R/generateState.R
5650d6d8b6da147a254e9681a291a90b *R/generateTimeSeries.R
4db8f585d2e3477db95a8db2720a2e4c *R/getAttractorSequence.R
780c0fa233db1a77a2d44845fee91c98 *R/getAttractors.R
08764b48eccb7812f9c333c122d1e689 *R/getBasinOfAttraction.R
cc663c2b39dc50cd45bbb83d7cd36d44 *R/getPathToAttractor.R
9637fc5badfec905a1d865d5e65d3839 *R/getStateSummary.R
a45f67785e1846f8482c9ff10debd95c *R/getTransitionProbabilities.R
d31c9950c1a42c23eb5585c23e98bb25 *R/getTransitionTable.R
bcb05028ee3a7409ade10f1e59324997 *R/helpers.R
426b17cc03f8f6bd81f999a31a9f99de *R/loadBioTapestry.R
015fccf466d7871a8c0d4ad04ea8e1f9 *R/loadNetwork.R
fce420da0cc052583b166457e0792350 *R/loadSBML.R
817f7c8476aa6b32443be62885e3c72d *R/markovSimulation.R
af7f8cfe863d3d66809dc64a47b407f6 *R/parseBooleanFunction.R
75a4ff7284740122216a79cd7f9508e1 *R/perturbNetwork.R
6e8d3d79095844cf1fb6cb7c75750cfe *R/perturbTrajectories.R
fcd168fb6cf77be64c52ad5d8d471717 *R/plotAttractors.R
20fd67145509cae5e9701fcfa93e210c *R/plotNetworkWiring.R
9f64811ec997a7aa2fc262725ae6f7e5 *R/plotPBNTransitions.R
3b126c2b645f8ee9ad012b6fb1efaa84 *R/plotSequence.R
1a4c7472949dcd09fe8c8db854233825 *R/plotStateGraph.R
1d3e5b86636a5b54035d7062285e34e4 *R/print.AttractorInfo.R
bd5b5182c9a4321e0051be7f40bcbf6f *R/print.BooleanNetwork.R
09ac08c8cb2ef098c96a86de93e5ad7c *R/print.BooleanStateInfo.R
b4ce1c3d7c29f9b9d92a5428ace77b0a *R/print.MarkovSimulation.R
55d7e998f889cf528bef3d68edb38562 *R/print.ProbabilisticBooleanNetwork.R
2a6921108f7704c4949bcd96b82a2cb0 *R/print.SymbolicBooleanNetwork.R
1138169d9ef31f04670bbc2544524e4c *R/print.SymbolicSimulation.R
0adfd6c034e0bf75c16d351c4f2e52f6 *R/print.TransitionTable.R
78216cfe9045ded3a90b43edb6e0d21f *R/reconstructNetwork.R
00623749adde58c327566c72a67d4027 *R/saveNetwork.R
8db261cf9b75f737bc6ca7f49c67dbd0 *R/scanStatistic.R
bf8262876ef7f928d49783d754f48d8f *R/sequenceToLaTeX.R
5877e9963cac94f7dc2b245079826450 *R/simplifyNetwork.R
28588b831db57224a25a217f5b7c02b4 *R/simulateSymbolicModel.R
a778a7e3bf2926f30fcbe2860bcbaeff *R/stateTransition.R
bcc8e5efc6d7859ebb74a9ec935bccb1 *R/symbolicToTruthTable.R
42daa52bc14fc6918004e35203e07907 *R/testNetworkProperties.R
568159a3609b108c45ba2c39728fa6ce *R/toPajek.R
47bc51ada1eefa53c11e0171a589bc8b *R/toSBML.R
6837a7eacb84d76090b898ab2727fc3a *R/truthTableToSymbolic.R
811f12cc71a25cbf23ade7eb93bb2162 *R/zeta.R
2f21c1c19343745dc02bf0de0761fbd1 *build/vignette.rds
6323b9a68ede50d320ceffa342711988 *data/cellcycle.rda
2162a3dfd9f29f06223413307dd177c8 *data/examplePBN.rda
d58578f1cc7da58378f1617a6d8bb021 *data/igf.rda
8919de127f7ee2391900468a36c5dcd4 *data/yeastTimeSeries.rda
62409980eecaca8e52f1d495f499d6bd *inst/CITATION
f40e99908372998ba08a747e827d83bf *inst/NEWS.Rd
cda72cec7898c9ad77c0cce064efb747 *inst/doc/BoolNet_package_vignette.R
49c259005afa7cf046ffb9c9e763fc83 *inst/doc/BoolNet_package_vignette.Snw
ab02ae582727c0f2ce23647c82cf4735 *inst/doc/BoolNet_package_vignette.pdf
fcb0ddc4a26eb5062f05b55032e5b151 *inst/doc/cellcycle.txt
27bccf40991bbe762bc274cbd7874f40 *inst/doc/example.btp
64157206bf2b17b56cf1b1521fb5d3b3 *man/BoolNet-package.Rd
8643de64a151c82b1b3c178d689aec0c *man/attractorsToLaTeX.Rd
3461bfd43dd57a88d01d83df611f95c0 *man/binarizeTimeSeries.Rd
3623b2fe85476af5336cf7e220c1d60e *man/cellcycle.Rd
036eacac86ee9bfe4f821ab5ef7fb616 *man/chooseNetwork.Rd
7914c426e149300046dfce5ca9517777 *man/examplePBN.Rd
98af6630df76a0232c66ebb0bc8837d7 *man/fixGenes.Rd
642d27c47da308a31eaf78400173f2f4 *man/generateRandomNKNetwork.Rd
6b7e62a87a818acd4982332b9aa254e1 *man/generateState.Rd
38c0aa52a0ee9f8bf97e8067c77fcde5 *man/generateTimeSeries.Rd
201ec0e62a545f6a444f6caf689b3b03 *man/generationFunctions.Rd
35e00e1d48235e6deda56da6a5aa5758 *man/getAttractorSequence.Rd
f577a6ea84624c3064d6745201a3b62a *man/getAttractors.Rd
9a35b1240af9834c41698983a18a6304 *man/getBasinOfAttraction.Rd
942d670fcd5de88dc007005fdab638c6 *man/getPathToAttractor.Rd
86d4773284835753fd35078d27d620d9 *man/getStateSummary.Rd
87053d20084edd33f1c2fe2c2a4f9787 *man/getTransitionProbabilities.Rd
8489c176c7be92a3e98d55b44e8c7aa9 *man/getTransitionTable.Rd
ce766f16cf9e6a7a2bb9e883e8eaeb61 *man/igf.Rd
45e936129f9b2587bf185102395c260d *man/loadBioTapestry.Rd
ed4cbad9b4579b8a7c6b0cc2f4a936b1 *man/loadNetwork.Rd
2707e6dd84d360637b761470776337d8 *man/loadSBML.Rd
e6d111802bb3f2c9809112102307a6b0 *man/markovSimulation.Rd
1592f64ef13d306cbc4110ae2ce8f604 *man/perturbNetwork.Rd
196308b14d4adf113e9a71211c9018cf *man/perturbTrajectories.Rd
87cfb95f56d32c4c8cf5690b967fdbc1 *man/plotAttractors.Rd
0ef2c8aa6e3bde4ca852559657995c34 *man/plotNetworkWiring.Rd
9ba39e20433ffd9cfa5c29a6293a9ae2 *man/plotPBNTransitions.Rd
cf133630de500cb051830a60933aebfc *man/plotSequence.Rd
e0c340ffb88ae9e4adbc457d5ecaae49 *man/plotStateGraph.Rd
5f379a9e2b4a9a418d8b665af74757be *man/print.AttractorInfo.Rd
e0b2b98da9c074e4e30dd73d57dae9da *man/print.BooleanNetwork.Rd
b480ee06d8d8c2ade8ad0b5c89a13a7e *man/print.MarkovSimulation.Rd
d03ef8645e4d3ad814798e882167aa8d *man/print.ProbabilisticBooleanNetwork.Rd
0b0de959a1efcef7fb7cbee820e80353 *man/print.SymbolicSimulation.Rd
d6e7961146750c9b36106a8d280a1c09 *man/print.TransitionTable.Rd
41d44e143d021de61795a67ef6599ed4 *man/reconstructNetwork.Rd
a00de398f679b032e7455478b427b4b5 *man/saveNetwork.Rd
fb3ed745ed8c9ff4dfe397d016bef439 *man/sequenceToLaTeX.Rd
5944620706adac67972e04b0eea2627f *man/simplifyNetwork.Rd
84c8ece6a8c0fdf979af8084a1a47315 *man/simulateSymbolicModel.Rd
ce79e445196a6f65daca2a2cdce0aa88 *man/stateTransition.Rd
d3d63606a7c4517c4faa078a43d9bbdd *man/symbolicToTruthTable.Rd
e17c878be8a4edd1f2cd2c21ad7baaa7 *man/testNetworkProperties.Rd
a5db19da3fb5103170c96cad7d537b74 *man/toPajek.Rd
205d9b5aa773edc1124a0ae58d5e7a0e *man/toSBML.Rd
a43aad3b0dd5fff7a95a9075bdfdaa2e *man/truthTableToSymbolic.Rd
7ffc48740e826cbf5c56c11fb8dfe9df *man/yeastTimeSeries.Rd
a51a8c64ec6b1663297b76263d42dc09 *src/boolean_network.c
0545b3b0cbcacb0031fc0908ee97225a *src/common.c
58ea72840dd9c7591e37c90e1666a487 *src/common.h
8b8f36f3817e3b52ffc0025ccafa22da *src/probabilistic_boolean_network.c
686e443cfcfa3f597ea866bc25c356e7 *src/random.h
58be262aa256be87d8d8cf3cf63abfb3 *src/reconstruct_network.c
f15b38ef61b81e1653d9265ff6676a93 *src/symbolic_simulator.c
460b4e88a7af5ba2c60231ca9f3644c8 *src/uthash.h
49c259005afa7cf046ffb9c9e763fc83 *vignettes/BoolNet_package_vignette.Snw
779ac458f99fd3375a6f11379e8aa7b4 *vignettes/BoolNet_package_vignette.bib
cbc02d945670e5381418720262b10955 *vignettes/biotap_initval.png
530409792bed5d5a53140e85554b9d61 *vignettes/biotap_logic.png
d4a2fcf1d0a873afde1c021019649014 *vignettes/biotap_model.png
e02e5fea28346a3d8162b4feaa6ffb05 *vignettes/biotap_sim_properties.png
d6aa77a2d43960ebb98c288990d3fe41 *vignettes/pajek.png