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Revision 6e9b9067f0adf1bd223c5ee0194d75847fa18321 authored by Jack Cazet on 29 March 2021, 16:10:19 UTC, committed by Jack Cazet on 29 March 2021, 16:10:19 UTC 
Updates for published version of manuscript.
1 parent fc9478f
History
File Mode Size
105_mitochondrial_genome.fa -rw-r--r-- 15.7 KB
ATAC_Mapping_Pipeline.sh -rwxr-xr-x 6.5 KB
ATAC_Peak_Pipeline.sh -rwxr-xr-x 8.4 KB
Consensus_Peaks.R -rw-r--r-- 2.6 KB
Dovetail.genome -rwxr-xr-x 100.6 KB
Dovetail_mRNAs_Genemap.txt -rw-r--r-- 575.6 KB
NexteraPE-PE.fa -rw-r--r-- 239 bytes
RNA_Mapping_Pipeline.sh -rwxr-xr-x 3.5 KB
TSS_Calculation.R -rw-r--r-- 1.7 KB
TruSeq3-SE.fa -rw-r--r-- 355 bytes
Wenger_Accessions.txt -rw-r--r-- 1.1 KB
dovetail_genes_High2000.bed -rw-r--r-- 150.5 KB
generateSubsampleValue.R -rw-r--r-- 171 bytes
generate_RNA_Matrix.sh -rwxr-xr-x 203 bytes
generate_consensus.sh -rwxr-xr-x 2.0 KB
prep_references.sh -rw-r--r-- 262 bytes
python_requirements.txt -rw-r--r-- 748 bytes
slurm_ATAC_Mapping_Pipeline.sh -rwxr-xr-x 860 bytes
slurm_ATAC_Peak_Calling.sh -rw-r--r-- 377 bytes
slurm_RNA_pipeline_run.sh -rwxr-xr-x 791 bytes
slurm_generate_ATAC_peak_consensus.sh -rw-r--r-- 242 bytes
slurm_generate_RNA_matrix.sh -rw-r--r-- 200 bytes
slurm_prepare_references.sh -rw-r--r-- 228 bytes
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