https://github.com/ctlab/phantasus
Revision 72236d01af3e5638a9291082ac7da147e9049bbc authored by Vladislav Kamenev on 02 April 2019, 16:42:49 UTC, committed by Vladislav Kamenev on 02 April 2019, 16:42:49 UTC
This reverts commit 3895d879e87d0c61051bbe8ed9c69ca76ec11c60.
1 parent 3895d87
Tip revision: 72236d01af3e5638a9291082ac7da147e9049bbc authored by Vladislav Kamenev on 02 April 2019, 16:42:49 UTC
Revert "Linked dataset update"
Revert "Linked dataset update"
Tip revision: 72236d0
limmaAnalysis.Rd
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/limmaAnalysis.R
\name{limmaAnalysis}
\alias{limmaAnalysis}
\title{Differential Expression analysis.}
\usage{
limmaAnalysis(es, fieldValues)
}
\arguments{
\item{es}{ExpressionSet object. It should be normalized for
more accurate analysis.}
\item{fieldValues}{Vector of comparison values, mapping
categories' names to columns/samples}
}
\value{
Name of the file containing serialized de-matrix.
}
\description{
\code{limmaAnalysis} performs differential expression analysis
from limma package and returns a ProtoBuf-serialized resulting
de-matrix.
}
\examples{
\dontrun{
data(es)
limmaAnalysis(es, fieldValues = c("A", "A", "A", "B", "B"))
}
}
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