https://github.com/ctlab/phantasus
Revision 88c8f6a5a8a4200ec91ae5c58cccf5cf21bbe5be authored by Alexey Sergushichev on 27 March 2019, 08:17:26 UTC, committed by Alexey Sergushichev on 27 March 2019, 08:17:26 UTC
1 parent 26b91d6
Tip revision: 88c8f6a5a8a4200ec91ae5c58cccf5cf21bbe5be authored by Alexey Sergushichev on 27 March 2019, 08:17:26 UTC
fix for fgsea's log2err=NA
fix for fgsea's log2err=NA
Tip revision: 88c8f6a
NAMESPACE
# Generated by roxygen2: do not edit by hand
export(getES)
export(getGDS)
export(getGSE)
export(read.gct)
export(reparseCachedESs)
export(servePhantasus)
export(write.gct)
import(AnnotationDbi)
import(Biobase)
import(GEOquery)
import(Rook)
import(ccaPP)
import(ggplot2)
import(grid)
import(gtable)
import(htmltools)
import(httpuv)
import(jsonlite)
import(limma)
import(opencpu)
import(rhdf5)
import(stats)
import(svglite)
importFrom(fgsea,fgseaMultilevel)
importFrom(fgsea,plotEnrichment)
importFrom(ggplot2,ggtitle)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,svg)
importFrom(methods,new)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(utils,download.file)
importFrom(utils,getFromNamespace)
importFrom(utils,head)
importFrom(utils,read.table)
importFrom(utils,write.table)
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